RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 CD99L2Q8TCZ2 262 aa14.43□□□□□ -0.1
RAB5C-203ENST00000546881 OPTNQ96CV9 577 aa14.43□□□□□ -0.1
RAB5C-203ENST00000546881 TMEM39BQ9GZU3 492 aa14.43□□□□□ -0.1
RAB5C-203ENST00000546881 RIPOR2Q9Y4F9 1068 aa14.43□□□□□ -0.1
RAB5C-203ENST00000546881 ARAP2Q8WZ64 1704 aa14.43□□□□□ -0.1
RAB5C-203ENST00000546881 GRIK5Q16478 980 aa14.42□□□□□ -0.1
RAB5C-203ENST00000546881 PRPF38BQ5VTL8 546 aaKnown RBP14.42□□□□□ -0.1
RAB5C-203ENST00000546881 OTOP1Q7RTM1 612 aa14.42□□□□□ -0.1
RAB5C-203ENST00000546881 MRPL50Q8N5N7 158 aaKnown RBP14.42□□□□□ -0.1
RAB5C-203ENST00000546881 KLHDC4Q8TBB5 520 aa14.42□□□□□ -0.1
RAB5C-203ENST00000546881 ERO1AQ96HE7 468 aa14.42□□□□□ -0.1
RAB5C-203ENST00000546881 OTOFQ9HC10 1997 aa14.42□□□□□ -0.1
RAB5C-203ENST00000546881 UTYO14607 1347 aa14.41□□□□□ -0.1
RAB5C-203ENST00000546881 CACNB3P54284 484 aa14.41□□□□□ -0.1
RAB5C-203ENST00000546881 FBXO33Q7Z6M2 555 aa14.41□□□□□ -0.1
RAB5C-203ENST00000546881 ANKRD44Q8N8A2 993 aa14.41□□□□□ -0.1
RAB5C-203ENST00000546881 CNKSR2Q8WXI2 1034 aa14.41□□□□□ -0.1
RAB5C-203ENST00000546881 PDE4DIPQ5VU43 2346 aa14.41□□□□□ -0.1
RAB5C-203ENST00000546881 PDE8BO95263 885 aa14.4□□□□□ -0.1
RAB5C-203ENST00000546881 BCAMP50895 628 aa14.4□□□□□ -0.1
RAB5C-203ENST00000546881 VGLL4Q14135 290 aa14.4□□□□□ -0.1
RAB5C-203ENST00000546881 RABL6Q3YEC7 729 aaPredicted RBP14.4□□□□□ -0.1
RAB5C-203ENST00000546881 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.4□□□□□ -0.1
RAB5C-203ENST00000546881 TBC1D22AQ8WUA7 517 aa14.4□□□□□ -0.1
RAB5C-203ENST00000546881 TEKT1Q969V4 418 aa14.4□□□□□ -0.1
RAB5C-203ENST00000546881 OTUD5Q96G74 571 aa14.4□□□□□ -0.1
RAB5C-203ENST00000546881 TEPSINQ96N21 525 aa14.4□□□□□ -0.1
RAB5C-203ENST00000546881 PTPN18Q99952 460 aa14.4□□□□□ -0.1
RAB5C-203ENST00000546881 TMOD2Q9NZR1 351 aa14.4□□□□□ -0.1
RAB5C-203ENST00000546881 CSADQ9Y600 493 aa14.4□□□□□ -0.1
RAB5C-203ENST00000546881 CCL15-CCL14A0A0B4J2E2 113 aa14.39□□□□□ -0.11
RAB5C-203ENST00000546881 MAP3K9P80192 1104 aa14.39□□□□□ -0.11
RAB5C-203ENST00000546881 SP3Q02447 781 aa14.39□□□□□ -0.11
RAB5C-203ENST00000546881 CCL15Q16663 113 aa14.39□□□□□ -0.11
RAB5C-203ENST00000546881 DIEXFQ68CQ4 756 aaKnown RBP14.39□□□□□ -0.11
RAB5C-203ENST00000546881 EFCC1Q9HA90 598 aa14.39□□□□□ -0.11
RAB5C-203ENST00000546881 LAMB1P07942 1786 aa14.39□□□□□ -0.11
RAB5C-203ENST00000546881 PTPRCP08575 1304 aa14.39□□□□□ -0.11
RAB5C-203ENST00000546881 TESPA1A2RU30 521 aaPredicted RBP14.38□□□□□ -0.11
RAB5C-203ENST00000546881 IFIT1P09914 478 aaKnown RBP14.38□□□□□ -0.11
RAB5C-203ENST00000546881 TAF1CQ15572 869 aaPredicted RBP14.38□□□□□ -0.11
RAB5C-203ENST00000546881 VGLL2Q8N8G2 317 aa14.38□□□□□ -0.11
RAB5C-203ENST00000546881 BRI3BPQ8WY22 251 aa14.38□□□□□ -0.11
RAB5C-203ENST00000546881 SSH1Q8WYL5 1049 aa14.38□□□□□ -0.11
RAB5C-203ENST00000546881 PTPN22Q9Y2R2 807 aa14.38□□□□□ -0.11
RAB5C-203ENST00000546881 ZNF521Q96K83 1311 aa14.38□□□□□ -0.11
RAB5C-203ENST00000546881 E9PSI1 815 aa14.37□□□□□ -0.11
RAB5C-203ENST00000546881 GTF2A2P52657 109 aa14.37□□□□□ -0.11
RAB5C-203ENST00000546881 HDLBPQ00341 1268 aaKnown RBP14.37□□□□□ -0.11
RAB5C-203ENST00000546881 PUM3Q15397 648 aaKnown RBP14.37□□□□□ -0.11
RAB5C-203ENST00000546881 INTS3Q68E01 1043 aaKnown RBP14.37□□□□□ -0.11
RAB5C-203ENST00000546881 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.37□□□□□ -0.11
RAB5C-203ENST00000546881 MS4A4AQ96JQ5 239 aa14.37□□□□□ -0.11
RAB5C-203ENST00000546881 ZFYVE28Q9HCC9 887 aa14.37□□□□□ -0.11
RAB5C-203ENST00000546881 MAST3O60307 1309 aa14.37□□□□□ -0.11
RAB5C-203ENST00000546881 POTEFA5A3E0 1075 aa14.36□□□□□ -0.11
RAB5C-203ENST00000546881 SLC5A1P13866 664 aa14.36□□□□□ -0.11
RAB5C-203ENST00000546881 ZDHHC15Q96MV8 337 aa14.36□□□□□ -0.11
RAB5C-203ENST00000546881 WRNIP1Q96S55 665 aa14.36□□□□□ -0.11
RAB5C-203ENST00000546881 USP44Q9H0E7 712 aa14.36□□□□□ -0.11
RAB5C-203ENST00000546881 WDHD1O75717 1129 aaPredicted RBP14.35□□□□□ -0.11
RAB5C-203ENST00000546881 FAM43AQ8N2R8 423 aa14.35□□□□□ -0.11
RAB5C-203ENST00000546881 ZKSCAN4Q969J2 545 aaPredicted RBP14.35□□□□□ -0.11
RAB5C-203ENST00000546881 SMC4Q9NTJ3 1288 aa14.35□□□□□ -0.11
RAB5C-203ENST00000546881 SPDYE5A6NIY4 337 aa14.34□□□□□ -0.11
RAB5C-203ENST00000546881 EYA2O00167 538 aa14.34□□□□□ -0.11
RAB5C-203ENST00000546881 ECM2O94769 699 aaPredicted RBP14.34□□□□□ -0.11
RAB5C-203ENST00000546881 FGFR2P21802 821 aa14.34□□□□□ -0.11
RAB5C-203ENST00000546881 CAP1Q01518 475 aa14.34□□□□□ -0.11
RAB5C-203ENST00000546881 ARHGEF6Q15052 776 aa14.34□□□□□ -0.11
RAB5C-203ENST00000546881 APOBEC3HQ6NTF7 200 aaKnown RBP14.34□□□□□ -0.11
RAB5C-203ENST00000546881 HOOK2Q96ED9 719 aa14.34□□□□□ -0.11
RAB5C-203ENST00000546881 SIL1Q9H173 461 aa14.34□□□□□ -0.11
RAB5C-203ENST00000546881 SNCAIPQ9Y6H5 919 aa14.34□□□□□ -0.11
RAB5C-203ENST00000546881 MYCP01106 439 aaPredicted RBP14.33□□□□□ -0.12
RAB5C-203ENST00000546881 CETPP11597 493 aa14.33□□□□□ -0.12
RAB5C-203ENST00000546881 SLFN5Q08AF3 891 aa14.33□□□□□ -0.12
RAB5C-203ENST00000546881 DCAF15Q66K64 600 aa14.33□□□□□ -0.12
RAB5C-203ENST00000546881 HHIPL2Q6UWX4 724 aa14.33□□□□□ -0.12
RAB5C-203ENST00000546881 MIGA2Q7L4E1 593 aa14.33□□□□□ -0.12
RAB5C-203ENST00000546881 FAM83AQ86UY5 434 aa14.33□□□□□ -0.12
RAB5C-203ENST00000546881 ERO1BQ86YB8 467 aa14.33□□□□□ -0.12
RAB5C-203ENST00000546881 WDR66Q8TBY9 1149 aa14.33□□□□□ -0.12
RAB5C-203ENST00000546881 LPIN2Q92539 896 aa14.33□□□□□ -0.12
RAB5C-203ENST00000546881 SUGT1Q9Y2Z0 365 aa14.33□□□□□ -0.12
RAB5C-203ENST00000546881 KIF16BQ96L93 1317 aa14.33□□□□□ -0.12
RAB5C-203ENST00000546881 UBTFL1P0CB47 393 aaPredicted RBP14.32□□□□□ -0.12
RAB5C-203ENST00000546881 EN2P19622 333 aaPredicted RBP14.32□□□□□ -0.12
RAB5C-203ENST00000546881 RFX5P48382 616 aaPredicted RBP14.32□□□□□ -0.12
RAB5C-203ENST00000546881 TCP10Q12799 353 aa14.32□□□□□ -0.12
RAB5C-203ENST00000546881 SNAPC2Q13487 334 aa14.32□□□□□ -0.12
RAB5C-203ENST00000546881 SLC9C1Q4G0N8 1177 aa14.32□□□□□ -0.12
RAB5C-203ENST00000546881 ARMC5Q96C12 935 aa14.32□□□□□ -0.12
RAB5C-203ENST00000546881 TMEM106CQ9BVX2 250 aa14.32□□□□□ -0.12
RAB5C-203ENST00000546881 MRIQ9BWK5 157 aa14.32□□□□□ -0.12
RAB5C-203ENST00000546881 ZNF341Q9BYN7 854 aa14.32□□□□□ -0.12
RAB5C-203ENST00000546881 PTCH2Q9Y6C5 1203 aa14.32□□□□□ -0.12
RAB5C-203ENST00000546881 MYH13Q9UKX3 1938 aa14.32□□□□□ -0.12
RAB5C-203ENST00000546881 BTBD19C9JJ37 291 aa14.31□□□□□ -0.12
RAB5C-203ENST00000546881 IRF6O14896 467 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms