RNA–Protein interactions for RNA: ENST00000545848.5

LDHC-209, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-209ENST00000545848 TMPOP42166 694 aaKnown RBP8.35□□□□□ -1.07
LDHC-209ENST00000545848 CCDC155Q8N6L0 562 aa8.35□□□□□ -1.07
LDHC-209ENST00000545848 KDF1Q8NAX2 398 aaPredicted RBP8.35□□□□□ -1.07
LDHC-209ENST00000545848 RNF217Q8TC41 542 aa8.35□□□□□ -1.07
LDHC-209ENST00000545848 NDUFB9Q9Y6M9 179 aa8.35□□□□□ -1.07
LDHC-209ENST00000545848 BTBD11A6QL63 1104 aa8.34□□□□□ -1.07
LDHC-209ENST00000545848 GPR37L1O60883 481 aa8.34□□□□□ -1.07
LDHC-209ENST00000545848 PTGIRP43119 386 aa8.34□□□□□ -1.07
LDHC-209ENST00000545848 PRELPP51888 382 aa8.34□□□□□ -1.07
LDHC-209ENST00000545848 EIF5P55010 431 aaKnown RBP8.34□□□□□ -1.07
LDHC-209ENST00000545848 NR1H3Q13133 447 aa8.34□□□□□ -1.07
LDHC-209ENST00000545848 NFIXQ14938 502 aa8.34□□□□□ -1.07
LDHC-209ENST00000545848 ZNF428Q96B54 188 aa8.34□□□□□ -1.07
LDHC-209ENST00000545848 SNRKQ9NRH2 765 aa8.34□□□□□ -1.07
LDHC-209ENST00000545848 RTCBQ9Y3I0 505 aaKnown RBP8.34□□□□□ -1.07
LDHC-209ENST00000545848 DICER1Q9UPY3 1922 aaKnown RBP8.34□□□□□ -1.07
LDHC-209ENST00000545848 ABCC12Q96J65 1359 aa8.34□□□□□ -1.07
LDHC-209ENST00000545848 COL4A5P29400 1685 aa8.34□□□□□ -1.08
LDHC-209ENST00000545848 A0A1B0GUL6 1792 aa8.33□□□□□ -1.08
LDHC-209ENST00000545848 SLC35F4A4IF30 521 aa8.33□□□□□ -1.08
LDHC-209ENST00000545848 CAMTA2O94983 1202 aa8.33□□□□□ -1.08
LDHC-209ENST00000545848 TM4SF1P30408 202 aa8.33□□□□□ -1.08
LDHC-209ENST00000545848 CHRNA5P30532 468 aa8.33□□□□□ -1.08
LDHC-209ENST00000545848 EIF4A1P60842 406 aaKnown RBP8.33□□□□□ -1.08
LDHC-209ENST00000545848 TEFQ10587 303 aa8.33□□□□□ -1.08
LDHC-209ENST00000545848 HLFQ16534 295 aa8.33□□□□□ -1.08
LDHC-209ENST00000545848 TBC1D9BQ66K14 1250 aa8.33□□□□□ -1.08
LDHC-209ENST00000545848 TBC1D2BQ9UPU7 963 aa8.33□□□□□ -1.08
LDHC-209ENST00000545848 ADCY9O60503 1353 aa8.33□□□□□ -1.08
LDHC-209ENST00000545848 ZNF646O15015 1829 aaPredicted RBP8.32□□□□□ -1.08
LDHC-209ENST00000545848 A0A0G2JLW4 131 aa8.32□□□□□ -1.08
LDHC-209ENST00000545848 APBB1O00213 710 aa8.32□□□□□ -1.08
LDHC-209ENST00000545848 TRAPPC3LQ5T215 181 aa8.32□□□□□ -1.08
LDHC-209ENST00000545848 FOXD4L5Q5VV16 416 aaPredicted RBP8.32□□□□□ -1.08
LDHC-209ENST00000545848 TTLL7Q6ZT98 887 aa8.32□□□□□ -1.08
LDHC-209ENST00000545848 NUDCQ9Y266 331 aa8.32□□□□□ -1.08
LDHC-209ENST00000545848 ZNF330Q9Y3S2 320 aaPredicted RBP8.32□□□□□ -1.08
LDHC-209ENST00000545848 APAF1O14727 1248 aa8.31□□□□□ -1.08
LDHC-209ENST00000545848 DPEP1P16444 411 aa8.31□□□□□ -1.08
LDHC-209ENST00000545848 RIPK4P57078 832 aa8.31□□□□□ -1.08
LDHC-209ENST00000545848 RNF20Q5VTR2 975 aa8.31□□□□□ -1.08
LDHC-209ENST00000545848 BICDL1Q6ZP65 573 aa8.31□□□□□ -1.08
LDHC-209ENST00000545848 GPR161Q8N6U8 529 aaKnown RBP8.31□□□□□ -1.08
LDHC-209ENST00000545848 ZNF592Q92610 1267 aa8.31□□□□□ -1.08
LDHC-209ENST00000545848 NARFQ9UHQ1 456 aa8.31□□□□□ -1.08
LDHC-209ENST00000545848 LRRC37AA6NMS7 1700 aa8.31□□□□□ -1.08
LDHC-209ENST00000545848 UBN2Q6ZU65 1347 aa8.3□□□□□ -1.08
LDHC-209ENST00000545848 LTBP1Q14766 1721 aa8.3□□□□□ -1.08
LDHC-209ENST00000545848 ATP5J2-PTCD1G3V325 749 aa8.3□□□□□ -1.08
LDHC-209ENST00000545848 ITGA6P23229 1130 aa8.3□□□□□ -1.08
LDHC-209ENST00000545848 POLD1P28340 1107 aa8.3□□□□□ -1.08
LDHC-209ENST00000545848 MCCD1P59942 119 aaPredicted RBP8.3□□□□□ -1.08
LDHC-209ENST00000545848 PNISRQ8TF01 805 aaKnown RBP8.3□□□□□ -1.08
LDHC-209ENST00000545848 NANOS1Q8WY41 292 aaKnown RBP8.3□□□□□ -1.08
LDHC-209ENST00000545848 FMNL2Q96PY5 1086 aa8.3□□□□□ -1.08
LDHC-209ENST00000545848 SNED1Q8TER0 1413 aa8.29□□□□□ -1.08
LDHC-209ENST00000545848 ZNF853P0CG23 659 aa8.29□□□□□ -1.08
LDHC-209ENST00000545848 RFC4P35249 363 aa8.29□□□□□ -1.08
LDHC-209ENST00000545848 ERVK-9P63128 1117 aa8.29□□□□□ -1.08
LDHC-209ENST00000545848 KRT76Q01546 638 aa8.29□□□□□ -1.08
LDHC-209ENST00000545848 TAF7Q15545 349 aaPredicted RBP8.29□□□□□ -1.08
LDHC-209ENST00000545848 CC2D2BQ6DHV5 1058 aa8.29□□□□□ -1.08
LDHC-209ENST00000545848 OLFM4Q6UX06 510 aa8.29□□□□□ -1.08
LDHC-209ENST00000545848 TTC5Q8N0Z6 440 aa8.29□□□□□ -1.08
LDHC-209ENST00000545848 RUNDC1Q96C34 613 aa8.29□□□□□ -1.08
LDHC-209ENST00000545848 MBIPQ9NS73 344 aa8.29□□□□□ -1.08
LDHC-209ENST00000545848 MYH3P11055 1940 aa8.29□□□□□ -1.08
LDHC-209ENST00000545848 MAPK8IP3Q9UPT6 1336 aa8.29□□□□□ -1.08
LDHC-209ENST00000545848 DUOX1Q9NRD9 1551 aa8.28□□□□□ -1.08
LDHC-209ENST00000545848 CHL1O00533 1208 aa8.28□□□□□ -1.08
LDHC-209ENST00000545848 HTATSF1O43719 755 aaKnown RBP8.28□□□□□ -1.08
LDHC-209ENST00000545848 ZEB1P37275 1124 aaPredicted RBP8.28□□□□□ -1.08
LDHC-209ENST00000545848 PRR5LQ6MZQ0 368 aa8.28□□□□□ -1.08
LDHC-209ENST00000545848 LYSMD3Q7Z3D4 306 aa8.28□□□□□ -1.08
LDHC-209ENST00000545848 SYNE4Q8N205 404 aa8.28□□□□□ -1.08
LDHC-209ENST00000545848 NGEFQ8N5V2 710 aa8.28□□□□□ -1.08
LDHC-209ENST00000545848 TSPYL6Q8N831 410 aa8.28□□□□□ -1.08
LDHC-209ENST00000545848 FLAD1Q8NFF5 587 aa8.28□□□□□ -1.08
LDHC-209ENST00000545848 TSR2Q969E8 191 aaKnown RBP8.28□□□□□ -1.08
LDHC-209ENST00000545848 CDC14CA4D256 554 aa8.27□□□□□ -1.09
LDHC-209ENST00000545848 SNRPA1P09661 255 aaKnown RBP8.27□□□□□ -1.09
LDHC-209ENST00000545848 MYL6BP14649 208 aa8.27□□□□□ -1.09
LDHC-209ENST00000545848 YY1P25490 414 aa8.27□□□□□ -1.09
LDHC-209ENST00000545848 IL6STP40189 918 aaPredicted RBP8.27□□□□□ -1.09
LDHC-209ENST00000545848 SCTRP47872 440 aa8.27□□□□□ -1.09
LDHC-209ENST00000545848 RNF144AP50876 292 aaPredicted RBP8.27□□□□□ -1.09
LDHC-209ENST00000545848 RASSF7Q02833 373 aa8.27□□□□□ -1.09
LDHC-209ENST00000545848 C8orf58Q8NAV2 365 aa8.27□□□□□ -1.09
LDHC-209ENST00000545848 RTF1Q92541 710 aaKnown RBP8.27□□□□□ -1.09
LDHC-209ENST00000545848 CNTNAP3BQ96NU0 1288 aa8.27□□□□□ -1.09
LDHC-209ENST00000545848 CNTNAP3Q9BZ76 1288 aa8.27□□□□□ -1.09
LDHC-209ENST00000545848 TSPYL4Q9UJ04 414 aa8.27□□□□□ -1.09
LDHC-209ENST00000545848 PCDHB11Q9Y5F2 797 aa8.27□□□□□ -1.09
LDHC-209ENST00000545848 CD2APQ9Y5K6 639 aa8.27□□□□□ -1.09
LDHC-209ENST00000545848 ATP10DQ9P241 1426 aa8.27□□□□□ -1.09
LDHC-209ENST00000545848 MEN1O00255 615 aa8.26□□□□□ -1.09
LDHC-209ENST00000545848 TCERG1O14776 1098 aaKnown RBP8.26□□□□□ -1.09
LDHC-209ENST00000545848 SERPINB2P05120 415 aa8.26□□□□□ -1.09
LDHC-209ENST00000545848 GPR162Q16538 588 aa8.26□□□□□ -1.09
LDHC-209ENST00000545848 PRICKLE2Q7Z3G6 844 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms