RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 TRIM27P14373 513 aa26.37■■□□□ 1.81
SCARB1-210ENST00000545493 RASA3Q14644 834 aa26.37■■□□□ 1.81
SCARB1-210ENST00000545493 NBPF12Q5TAG4 269 aaPredicted RBP26.37■■□□□ 1.81
SCARB1-210ENST00000545493 MCOLN1Q9GZU1 580 aa26.37■■□□□ 1.81
SCARB1-210ENST00000545493 TDRD3Q9H7E2 651 aaKnown RBP26.37■■□□□ 1.81
SCARB1-210ENST00000545493 FBXO3Q9UK99 471 aa26.37■■□□□ 1.81
SCARB1-210ENST00000545493 CDAN1Q8IWY9 1227 aa26.36■■□□□ 1.81
SCARB1-210ENST00000545493 BCAR3O75815 825 aa26.35■■□□□ 1.81
SCARB1-210ENST00000545493 TNFAIP1Q13829 316 aa26.34■■□□□ 1.81
SCARB1-210ENST00000545493 DIEXFQ68CQ4 756 aaKnown RBP26.34■■□□□ 1.81
SCARB1-210ENST00000545493 CLMNQ96JQ2 1002 aa26.34■■□□□ 1.81
SCARB1-210ENST00000545493 COPRSQ9NQ92 184 aa26.34■■□□□ 1.81
SCARB1-210ENST00000545493 HDLBPQ00341 1268 aaKnown RBP26.33■■□□□ 1.81
SCARB1-210ENST00000545493 DGKZQ13574 1117 aa26.33■■□□□ 1.81
SCARB1-210ENST00000545493 ATP2B3Q16720 1220 aa26.33■■□□□ 1.81
SCARB1-210ENST00000545493 SPRYD7Q5W111 196 aa26.33■■□□□ 1.81
SCARB1-210ENST00000545493 TEPSINQ96N21 525 aa26.33■■□□□ 1.81
SCARB1-210ENST00000545493 PPP1R12BO60237 982 aaPredicted RBP26.32■■□□□ 1.8
SCARB1-210ENST00000545493 IL15P40933 162 aaPredicted RBP26.32■■□□□ 1.8
SCARB1-210ENST00000545493 HNRNPUQ00839 825 aaKnown RBP eCLIP26.32■■□□□ 1.83e-6■■□□□ 14.2
SCARB1-210ENST00000545493 SUPT20HL1Q3ZLR7 823 aa26.32■■□□□ 1.8
SCARB1-210ENST00000545493 ATF7IPQ6VMQ6 1270 aa26.32■■□□□ 1.8
SCARB1-210ENST00000545493 TEKT1Q969V4 418 aa26.32■■□□□ 1.8
SCARB1-210ENST00000545493 TCP10L2B9ZVM9 353 aa26.31■■□□□ 1.8
SCARB1-210ENST00000545493 TM4SF4P48230 202 aa26.31■■□□□ 1.8
SCARB1-210ENST00000545493 HDAC5Q9UQL6 1122 aa26.31■■□□□ 1.8
SCARB1-210ENST00000545493 GNAI3P08754 354 aa26.3■■□□□ 1.8
SCARB1-210ENST00000545493 MTX1Q13505 466 aa26.3■■□□□ 1.8
SCARB1-210ENST00000545493 FRAT1Q92837 279 aaPredicted RBP26.3■■□□□ 1.8
SCARB1-210ENST00000545493 WNK4Q96J92 1243 aa26.3■■□□□ 1.8
SCARB1-210ENST00000545493 ZDHHC15Q96MV8 337 aa26.3■■□□□ 1.8
SCARB1-210ENST00000545493 TMEM39BQ9GZU3 492 aa26.3■■□□□ 1.8
SCARB1-210ENST00000545493 CEP126Q9P2H0 1117 aa26.3■■□□□ 1.8
SCARB1-210ENST00000545493 SUGT1Q9Y2Z0 365 aa26.3■■□□□ 1.8
SCARB1-210ENST00000545493 MAST3O60307 1309 aa26.3■■□□□ 1.8
SCARB1-210ENST00000545493 USP2O75604 605 aaPredicted RBP26.29■■□□□ 1.8
SCARB1-210ENST00000545493 CACNB3P54284 484 aa26.29■■□□□ 1.8
SCARB1-210ENST00000545493 SREBF2Q12772 1141 aa26.29■■□□□ 1.8
SCARB1-210ENST00000545493 IPO8O15397 1037 aaKnown RBP26.28■■□□□ 1.8
SCARB1-210ENST00000545493 SRGAP3O43295 1099 aa26.28■■□□□ 1.8
SCARB1-210ENST00000545493 ADORA1P30542 326 aa26.28■■□□□ 1.8
SCARB1-210ENST00000545493 IREB2P48200 963 aaKnown RBP26.28■■□□□ 1.8
SCARB1-210ENST00000545493 APOBEC3HQ6NTF7 200 aaKnown RBP26.28■■□□□ 1.8
SCARB1-210ENST00000545493 UNCXA6NJT0 531 aa26.27■■□□□ 1.8
SCARB1-210ENST00000545493 ZBTB48P10074 688 aaPredicted RBP26.27■■□□□ 1.8
SCARB1-210ENST00000545493 GJA5P36382 358 aa26.27■■□□□ 1.8
SCARB1-210ENST00000545493 PHKA1P46020 1223 aa26.27■■□□□ 1.8
SCARB1-210ENST00000545493 WDR66Q8TBY9 1149 aa26.27■■□□□ 1.8
SCARB1-210ENST00000545493 CLUAP1Q96AJ1 413 aa26.27■■□□□ 1.8
SCARB1-210ENST00000545493 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.27■■□□□ 1.8
SCARB1-210ENST00000545493 TBC1D8O95759 1140 aa26.26■■□□□ 1.79
SCARB1-210ENST00000545493 TNNI2P48788 182 aa26.26■■□□□ 1.79
SCARB1-210ENST00000545493 SLC10A4Q96EP9 437 aa26.26■■□□□ 1.79
SCARB1-210ENST00000545493 MRIQ9BWK5 157 aa26.26■■□□□ 1.79
SCARB1-210ENST00000545493 RPAP1Q9BWH6 1393 aaPredicted RBP26.25■■□□□ 1.79
SCARB1-210ENST00000545493 CCDC85CA6NKD9 419 aa26.25■■□□□ 1.79
SCARB1-210ENST00000545493 PRDX5P30044 214 aa26.25■■□□□ 1.79
SCARB1-210ENST00000545493 HHIPL2Q6UWX4 724 aa26.25■■□□□ 1.79
SCARB1-210ENST00000545493 ANKRD13AQ8IZ07 590 aa26.25■■□□□ 1.79
SCARB1-210ENST00000545493 TMEM57Q8N5G2 664 aa26.25■■□□□ 1.79
SCARB1-210ENST00000545493 SALL1Q9NSC2 1324 aa26.24■■□□□ 1.79
SCARB1-210ENST00000545493 ZNF296Q8WUU4 475 aaPredicted RBP26.24■■□□□ 1.79
SCARB1-210ENST00000545493 CFHR5Q9BXR6 569 aa26.24■■□□□ 1.79
SCARB1-210ENST00000545493 DAGLAQ9Y4D2 1042 aa26.24■■□□□ 1.79
SCARB1-210ENST00000545493 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.24■■□□□ 1.79
SCARB1-210ENST00000545493 HTTP42858 3142 aa26.24■■□□□ 1.79
SCARB1-210ENST00000545493 MANSC4A6NHS7 340 aaPredicted RBP26.23■■□□□ 1.79
SCARB1-210ENST00000545493 ZBTB22O15209 634 aa26.23■■□□□ 1.79
SCARB1-210ENST00000545493 DIXDC1Q155Q3 683 aa26.23■■□□□ 1.79
SCARB1-210ENST00000545493 ZKSCAN2Q63HK3 967 aa26.23■■□□□ 1.79
SCARB1-210ENST00000545493 R3HDMLQ9H3Y0 253 aa26.23■■□□□ 1.79
SCARB1-210ENST00000545493 IGF2BP3O00425 579 aaKnown RBP eCLIP26.22■■□□□ 1.79
SCARB1-210ENST00000545493 SEMA3EO15041 775 aa26.22■■□□□ 1.79
SCARB1-210ENST00000545493 GNAI2P04899 355 aa26.22■■□□□ 1.79
SCARB1-210ENST00000545493 CCDC102BQ68D86 513 aa26.22■■□□□ 1.79
SCARB1-210ENST00000545493 CTU1Q7Z7A3 348 aaKnown RBP26.22■■□□□ 1.79
SCARB1-210ENST00000545493 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.22■■□□□ 1.79
SCARB1-210ENST00000545493 ELP3Q9H9T3 547 aa26.22■■□□□ 1.79
SCARB1-210ENST00000545493 GNL3LQ9NVN8 582 aaKnown RBP26.22■■□□□ 1.79
SCARB1-210ENST00000545493 TMOD2Q9NZR1 351 aa26.22■■□□□ 1.79
SCARB1-210ENST00000545493 DENND2AQ9ULE3 1009 aa26.22■■□□□ 1.79
SCARB1-210ENST00000545493 ZBED9Q6R2W3 1325 aa26.21■■□□□ 1.79
SCARB1-210ENST00000545493 PNMA6EA0A0J9YXQ4 647 aa26.21■■□□□ 1.79
SCARB1-210ENST00000545493 TFCP2Q12800 502 aa26.21■■□□□ 1.79
SCARB1-210ENST00000545493 NOM1Q5C9Z4 860 aaKnown RBP26.21■■□□□ 1.79
SCARB1-210ENST00000545493 FKBP1CQ5VVH2 108 aa26.21■■□□□ 1.79
SCARB1-210ENST00000545493 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.21■■□□□ 1.79
SCARB1-210ENST00000545493 FAM83AQ86UY5 434 aa26.21■■□□□ 1.79
SCARB1-210ENST00000545493 A0A1B0GUL7 405 aa26.2■■□□□ 1.78
SCARB1-210ENST00000545493 GPR25O00155 361 aa26.2■■□□□ 1.78
SCARB1-210ENST00000545493 RASGRF1Q13972 1273 aa26.2■■□□□ 1.78
SCARB1-210ENST00000545493 VGLL4Q14135 290 aa26.2■■□□□ 1.78
SCARB1-210ENST00000545493 IFNL1Q8IU54 200 aa26.2■■□□□ 1.78
SCARB1-210ENST00000545493 OPTNQ96CV9 577 aa26.2■■□□□ 1.78
SCARB1-210ENST00000545493 MYH2Q9UKX2 1941 aa26.2■■□□□ 1.78
SCARB1-210ENST00000545493 TIMM10P62072 90 aa26.19■■□□□ 1.78
SCARB1-210ENST00000545493 CNKSR2Q8WXI2 1034 aa26.19■■□□□ 1.78
SCARB1-210ENST00000545493 PDS5AQ29RF7 1337 aaKnown RBP26.18■■□□□ 1.78
SCARB1-210ENST00000545493 LDHBP07195 334 aaKnown RBP26.18■■□□□ 1.78
SCARB1-210ENST00000545493 XAGE2Q96GT9 111 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms