RNA–Protein interactions for RNA: ENST00000545367.5

NPIPB4-221, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 2

Gene NPIPB4, Length 846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-221ENST00000545367 TAF1CQ15572 869 aaPredicted RBP11.1□□□□□ -0.63
NPIPB4-221ENST00000545367 MAP3K11Q16584 847 aa11.1□□□□□ -0.63
NPIPB4-221ENST00000545367 RIC3Q7Z5B4 369 aa11.1□□□□□ -0.63
NPIPB4-221ENST00000545367 NBPF11Q86T75 865 aa11.1□□□□□ -0.63
NPIPB4-221ENST00000545367 TXNRD3Q86VQ6 643 aa11.1□□□□□ -0.63
NPIPB4-221ENST00000545367 ZBED3Q96IU2 234 aaPredicted RBP11.1□□□□□ -0.63
NPIPB4-221ENST00000545367 CDC5LQ99459 802 aaKnown RBP11.1□□□□□ -0.63
NPIPB4-221ENST00000545367 PTPN18Q99952 460 aa11.1□□□□□ -0.63
NPIPB4-221ENST00000545367 ELP3Q9H9T3 547 aa11.1□□□□□ -0.63
NPIPB4-221ENST00000545367 VEZTQ9HBM0 779 aa11.1□□□□□ -0.63
NPIPB4-221ENST00000545367 BOLA1Q9Y3E2 137 aa11.1□□□□□ -0.63
NPIPB4-221ENST00000545367 AOX1Q06278 1338 aa11.09□□□□□ -0.63
NPIPB4-221ENST00000545367 IREB2P48200 963 aaKnown RBP11.09□□□□□ -0.63
NPIPB4-221ENST00000545367 CCT4P50991 539 aaKnown RBP11.09□□□□□ -0.63
NPIPB4-221ENST00000545367 DLGAP5Q15398 846 aa11.09□□□□□ -0.63
NPIPB4-221ENST00000545367 DPF3Q92784 378 aa11.09□□□□□ -0.63
NPIPB4-221ENST00000545367 OPTNQ96CV9 577 aa11.09□□□□□ -0.63
NPIPB4-221ENST00000545367 ARHGAP39Q9C0H5 1083 aa11.09□□□□□ -0.63
NPIPB4-221ENST00000545367 COA1Q9GZY4 146 aa11.09□□□□□ -0.63
NPIPB4-221ENST00000545367 PPP2R3BQ9Y5P8 575 aa11.09□□□□□ -0.63
NPIPB4-221ENST00000545367 VCANP13611 3396 aa11.09□□□□□ -0.63
NPIPB4-221ENST00000545367 EYSQ5T1H1 3165 aa11.09□□□□□ -0.63
NPIPB4-221ENST00000545367 MYH13Q9UKX3 1938 aa11.08□□□□□ -0.64
NPIPB4-221ENST00000545367 F8W031 263 aaPredicted RBP11.08□□□□□ -0.64
NPIPB4-221ENST00000545367 PCCAP05165 728 aaPredicted RBP11.08□□□□□ -0.64
NPIPB4-221ENST00000545367 GTF2IP78347 998 aa11.08□□□□□ -0.64
NPIPB4-221ENST00000545367 TRIM28Q13263 835 aaKnown RBP11.08□□□□□ -0.64
NPIPB4-221ENST00000545367 NBPF12Q5TAG4 269 aaPredicted RBP11.08□□□□□ -0.64
NPIPB4-221ENST00000545367 BRI3BPQ8WY22 251 aa11.08□□□□□ -0.64
NPIPB4-221ENST00000545367 PNNQ9H307 717 aaKnown RBP11.08□□□□□ -0.64
NPIPB4-221ENST00000545367 GREM2Q9H772 168 aa11.08□□□□□ -0.64
NPIPB4-221ENST00000545367 HYPKQ9NX55 129 aa11.08□□□□□ -0.64
NPIPB4-221ENST00000545367 CWC25Q9NXE8 425 aaPredicted RBP11.08□□□□□ -0.64
NPIPB4-221ENST00000545367 CCL15-CCL14A0A0B4J2E2 113 aa11.07□□□□□ -0.64
NPIPB4-221ENST00000545367 SOX1O00570 391 aaPredicted RBP11.07□□□□□ -0.64
NPIPB4-221ENST00000545367 HOXB7P09629 217 aa11.07□□□□□ -0.64
NPIPB4-221ENST00000545367 TMPOP42166 694 aaKnown RBP11.07□□□□□ -0.64
NPIPB4-221ENST00000545367 NEUROD2Q15784 382 aa11.07□□□□□ -0.64
NPIPB4-221ENST00000545367 CCL15Q16663 113 aa11.07□□□□□ -0.64
NPIPB4-221ENST00000545367 TTLL5Q6EMB2 1281 aa11.07□□□□□ -0.64
NPIPB4-221ENST00000545367 ANKRD13AQ8IZ07 590 aa11.07□□□□□ -0.64
NPIPB4-221ENST00000545367 CERS5Q8N5B7 392 aa11.07□□□□□ -0.64
NPIPB4-221ENST00000545367 MINPP1Q9UNW1 487 aa11.07□□□□□ -0.64
NPIPB4-221ENST00000545367 TESPA1A2RU30 521 aaPredicted RBP11.06□□□□□ -0.64
NPIPB4-221ENST00000545367 CHL1O00533 1208 aa11.06□□□□□ -0.64
NPIPB4-221ENST00000545367 MYO1BO43795 1136 aa11.06□□□□□ -0.64
NPIPB4-221ENST00000545367 ARHGEF6Q15052 776 aa11.06□□□□□ -0.64
NPIPB4-221ENST00000545367 MTFR1Q15390 333 aa11.06□□□□□ -0.64
NPIPB4-221ENST00000545367 SUPT20HL1Q3ZLR7 823 aa11.06□□□□□ -0.64
NPIPB4-221ENST00000545367 CFAP100Q494V2 611 aa11.06□□□□□ -0.64
NPIPB4-221ENST00000545367 CDAN1Q8IWY9 1227 aa11.06□□□□□ -0.64
NPIPB4-221ENST00000545367 CCDC146Q8IYE0 955 aa11.06□□□□□ -0.64
NPIPB4-221ENST00000545367 FAM43AQ8N2R8 423 aa11.06□□□□□ -0.64
NPIPB4-221ENST00000545367 CCDC191Q8NCU4 936 aa11.06□□□□□ -0.64
NPIPB4-221ENST00000545367 LRCH3Q96II8 777 aa11.06□□□□□ -0.64
NPIPB4-221ENST00000545367 PHAXQ9H814 394 aaKnown RBP11.06□□□□□ -0.64
NPIPB4-221ENST00000545367 ZFYVE28Q9HCC9 887 aa11.06□□□□□ -0.64
NPIPB4-221ENST00000545367 JAG2Q9Y219 1238 aa11.06□□□□□ -0.64
NPIPB4-221ENST00000545367 KCNJ4P48050 445 aa11.05□□□□□ -0.64
NPIPB4-221ENST00000545367 MMP14P50281 582 aa11.05□□□□□ -0.64
NPIPB4-221ENST00000545367 LACTBP83111 547 aaPredicted RBP11.05□□□□□ -0.64
NPIPB4-221ENST00000545367 VGLL4Q14135 290 aa11.05□□□□□ -0.64
NPIPB4-221ENST00000545367 DUSP27Q5VZP5 1158 aa11.05□□□□□ -0.64
NPIPB4-221ENST00000545367 PRO3102Q9H379 93 aa11.05□□□□□ -0.64
NPIPB4-221ENST00000545367 BSDC1Q9NW68 430 aaPredicted RBP11.05□□□□□ -0.64
NPIPB4-221ENST00000545367 LAMA2P24043 3122 aaKnown RBP11.05□□□□□ -0.64
NPIPB4-221ENST00000545367 DOCK2Q92608 1830 aa11.05□□□□□ -0.64
NPIPB4-221ENST00000545367 DDX60LQ5H9U9 1706 aaKnown RBP11.04□□□□□ -0.64
NPIPB4-221ENST00000545367 PTPRFP10586 1907 aa11.04□□□□□ -0.64
NPIPB4-221ENST00000545367 AK9Q5TCS8 1911 aa11.04□□□□□ -0.64
NPIPB4-221ENST00000545367 USP2O75604 605 aaPredicted RBP11.04□□□□□ -0.64
NPIPB4-221ENST00000545367 RASA3Q14644 834 aa11.04□□□□□ -0.64
NPIPB4-221ENST00000545367 KIF22Q14807 665 aa11.04□□□□□ -0.64
NPIPB4-221ENST00000545367 HTATIP2Q9BUP3 242 aa11.04□□□□□ -0.64
NPIPB4-221ENST00000545367 UNCXA6NJT0 531 aa11.03□□□□□ -0.64
NPIPB4-221ENST00000545367 FARP2O94887 1054 aaPredicted RBP11.03□□□□□ -0.64
NPIPB4-221ENST00000545367 IGHMBP2P38935 993 aaKnown RBP11.03□□□□□ -0.64
NPIPB4-221ENST00000545367 GTF2A2P52657 109 aa11.03□□□□□ -0.64
NPIPB4-221ENST00000545367 RBM5P52756 815 aaKnown RBP eCLIP11.03□□□□□ -0.64
NPIPB4-221ENST00000545367 MTMR14Q8NCE2 650 aa11.03□□□□□ -0.64
NPIPB4-221ENST00000545367 TTLL11Q8NHH1 800 aa11.03□□□□□ -0.64
NPIPB4-221ENST00000545367 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.03□□□□□ -0.64
NPIPB4-221ENST00000545367 PRUNE2Q8WUY3 3088 aa11.03□□□□□ -0.64
NPIPB4-221ENST00000545367 ZBTB7BO15156 539 aaPredicted RBP11.02□□□□□ -0.65
NPIPB4-221ENST00000545367 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.02□□□□□ -0.65
NPIPB4-221ENST00000545367 UBE2Q1Q7Z7E8 422 aa11.02□□□□□ -0.65
NPIPB4-221ENST00000545367 PRMT6Q96LA8 375 aaPredicted RBP11.02□□□□□ -0.65
NPIPB4-221ENST00000545367 METTL22Q9BUU2 404 aaPredicted RBP11.02□□□□□ -0.65
NPIPB4-221ENST00000545367 CD209Q9NNX6 404 aa11.02□□□□□ -0.65
NPIPB4-221ENST00000545367 LEMD3Q9Y2U8 911 aa11.02□□□□□ -0.65
NPIPB4-221ENST00000545367 CSADQ9Y600 493 aa11.02□□□□□ -0.65
NPIPB4-221ENST00000545367 SNAP23O00161 211 aa11.01□□□□□ -0.65
NPIPB4-221ENST00000545367 WDHD1O75717 1129 aaPredicted RBP11.01□□□□□ -0.65
NPIPB4-221ENST00000545367 CCL5P13501 91 aa11.01□□□□□ -0.65
NPIPB4-221ENST00000545367 TNFAIP1Q13829 316 aa11.01□□□□□ -0.65
NPIPB4-221ENST00000545367 UBE3BQ7Z3V4 1068 aa11.01□□□□□ -0.65
NPIPB4-221ENST00000545367 ANKRD2Q9GZV1 360 aa11.01□□□□□ -0.65
NPIPB4-221ENST00000545367 MBIPQ9NS73 344 aa11.01□□□□□ -0.65
NPIPB4-221ENST00000545367 MAP3K2Q9Y2U5 619 aa11.01□□□□□ -0.65
NPIPB4-221ENST00000545367 NR2E3Q9Y5X4 410 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms