RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 RGMBQ6NW40 437 aa14.6□□□□□ -0.07
HDAC4-216ENST00000544989 SSH3Q8TE77 659 aa14.6□□□□□ -0.07
HDAC4-216ENST00000544989 TEKT1Q969V4 418 aa14.6□□□□□ -0.07
HDAC4-216ENST00000544989 IQSEC3Q9UPP2 1182 aaPredicted RBP14.6□□□□□ -0.07
HDAC4-216ENST00000544989 ARAP2Q8WZ64 1704 aa14.59□□□□□ -0.07
HDAC4-216ENST00000544989 CRKP46108 304 aa14.59□□□□□ -0.07
HDAC4-216ENST00000544989 POLA2Q14181 598 aa14.59□□□□□ -0.07
HDAC4-216ENST00000544989 DDX19BQ9UMR2 479 aa14.59□□□□□ -0.07
HDAC4-216ENST00000544989 PDS5AQ29RF7 1337 aaKnown RBP14.59□□□□□ -0.07
HDAC4-216ENST00000544989 PAPPA2Q9BXP8 1791 aa14.58□□□□□ -0.08
HDAC4-216ENST00000544989 PNMA6EA0A0J9YXQ4 647 aa14.58□□□□□ -0.08
HDAC4-216ENST00000544989 A0A1B0GUL7 405 aa14.58□□□□□ -0.08
HDAC4-216ENST00000544989 CA12O43570 354 aa14.58□□□□□ -0.08
HDAC4-216ENST00000544989 TFCP2Q12800 502 aa14.58□□□□□ -0.08
HDAC4-216ENST00000544989 GRM1Q13255 1194 aa14.58□□□□□ -0.08
HDAC4-216ENST00000544989 SUPT20HL1Q3ZLR7 823 aa14.58□□□□□ -0.08
HDAC4-216ENST00000544989 HHIPL2Q6UWX4 724 aa14.58□□□□□ -0.08
HDAC4-216ENST00000544989 ARMC9Q7Z3E5 817 aa14.58□□□□□ -0.08
HDAC4-216ENST00000544989 REM2Q8IYK8 340 aaPredicted RBP14.58□□□□□ -0.08
HDAC4-216ENST00000544989 PRMT6Q96LA8 375 aaPredicted RBP14.58□□□□□ -0.08
HDAC4-216ENST00000544989 DEFB129Q9H1M3 183 aa14.58□□□□□ -0.08
HDAC4-216ENST00000544989 TMOD2Q9NZR1 351 aa14.58□□□□□ -0.08
HDAC4-216ENST00000544989 SALL1Q9NSC2 1324 aa14.58□□□□□ -0.08
HDAC4-216ENST00000544989 UNCXA6NJT0 531 aa14.57□□□□□ -0.08
HDAC4-216ENST00000544989 TNNI2P48788 182 aa14.57□□□□□ -0.08
HDAC4-216ENST00000544989 ZNF157P51786 506 aaPredicted RBP14.57□□□□□ -0.08
HDAC4-216ENST00000544989 OS9Q13438 667 aaPredicted RBP14.57□□□□□ -0.08
HDAC4-216ENST00000544989 TTLL12Q14166 644 aaPredicted RBP14.57□□□□□ -0.08
HDAC4-216ENST00000544989 SPDYE2Q495Y8 402 aa14.57□□□□□ -0.08
HDAC4-216ENST00000544989 GORABQ5T7V8 394 aa14.57□□□□□ -0.08
HDAC4-216ENST00000544989 CCDC102BQ68D86 513 aa14.57□□□□□ -0.08
HDAC4-216ENST00000544989 PANK1Q8TE04 598 aa14.57□□□□□ -0.08
HDAC4-216ENST00000544989 VEZTQ9HBM0 779 aa14.57□□□□□ -0.08
HDAC4-216ENST00000544989 GPR108Q9NPR9 543 aa14.57□□□□□ -0.08
HDAC4-216ENST00000544989 PPP1R12BO60237 982 aaPredicted RBP14.56□□□□□ -0.08
HDAC4-216ENST00000544989 LDHBP07195 334 aaKnown RBP14.56□□□□□ -0.08
HDAC4-216ENST00000544989 MLLT1Q03111 559 aaPredicted RBP14.56□□□□□ -0.08
HDAC4-216ENST00000544989 PDE3AQ14432 1141 aa14.56□□□□□ -0.08
HDAC4-216ENST00000544989 HSP90AB4PQ58FF6 505 aa14.56□□□□□ -0.08
HDAC4-216ENST00000544989 SPTY2D1Q68D10 685 aaPredicted RBP14.56□□□□□ -0.08
HDAC4-216ENST00000544989 DLK2Q6UY11 383 aa14.56□□□□□ -0.08
HDAC4-216ENST00000544989 SLF2Q8IX21 1173 aa14.56□□□□□ -0.08
HDAC4-216ENST00000544989 XAGE2Q96GT9 111 aa14.56□□□□□ -0.08
HDAC4-216ENST00000544989 ZDHHC15Q96MV8 337 aa14.56□□□□□ -0.08
HDAC4-216ENST00000544989 ZNF70Q9UC06 446 aaPredicted RBP14.56□□□□□ -0.08
HDAC4-216ENST00000544989 NOP58Q9Y2X3 529 aaKnown RBP14.56□□□□□ -0.08
HDAC4-216ENST00000544989 ECM29Q5VYK3 1845 aa14.56□□□□□ -0.08
HDAC4-216ENST00000544989 CLRN2A0PK11 232 aa14.55□□□□□ -0.08
HDAC4-216ENST00000544989 HMMRO75330 724 aa14.55□□□□□ -0.08
HDAC4-216ENST00000544989 SURF6O75683 361 aaKnown RBP14.55□□□□□ -0.08
HDAC4-216ENST00000544989 PHKA1P46020 1223 aa14.55□□□□□ -0.08
HDAC4-216ENST00000544989 TIMM10P62072 90 aa14.55□□□□□ -0.08
HDAC4-216ENST00000544989 FKBP1CQ5VVH2 108 aa14.55□□□□□ -0.08
HDAC4-216ENST00000544989 ERC1Q8IUD2 1116 aa14.55□□□□□ -0.08
HDAC4-216ENST00000544989 HOOK2Q96ED9 719 aa14.55□□□□□ -0.08
HDAC4-216ENST00000544989 NEUROD6Q96NK8 337 aa14.55□□□□□ -0.08
HDAC4-216ENST00000544989 SLC10A3P09131 477 aa14.54□□□□□ -0.08
HDAC4-216ENST00000544989 UQCRFS1P1P0C7P4 283 aa14.54□□□□□ -0.08
HDAC4-216ENST00000544989 ADORA1P30542 326 aa14.54□□□□□ -0.08
HDAC4-216ENST00000544989 CEP85Q6P2H3 762 aa14.54□□□□□ -0.08
HDAC4-216ENST00000544989 RPAP2Q8IXW5 612 aaPredicted RBP14.54□□□□□ -0.08
HDAC4-216ENST00000544989 C1orf115Q9H7X2 142 aa14.54□□□□□ -0.08
HDAC4-216ENST00000544989 MYH13Q9UKX3 1938 aa14.54□□□□□ -0.08
HDAC4-216ENST00000544989 IGSF3O75054 1194 aa14.53□□□□□ -0.08
HDAC4-216ENST00000544989 AOC2O75106 756 aa14.53□□□□□ -0.08
HDAC4-216ENST00000544989 IREB2P48200 963 aaKnown RBP14.53□□□□□ -0.08
HDAC4-216ENST00000544989 RASA3Q14644 834 aa14.53□□□□□ -0.08
HDAC4-216ENST00000544989 MAP3K11Q16584 847 aa14.53□□□□□ -0.08
HDAC4-216ENST00000544989 PRAMEF18Q5VWM3 479 aa14.53□□□□□ -0.08
HDAC4-216ENST00000544989 TDRD3Q9H7E2 651 aaKnown RBP14.53□□□□□ -0.08
HDAC4-216ENST00000544989 SCAF8Q9UPN6 1271 aaKnown RBP14.53□□□□□ -0.08
HDAC4-216ENST00000544989 PCDHAC2Q9Y5I4 1007 aa14.53□□□□□ -0.08
HDAC4-216ENST00000544989 FAM155AB1AL88 458 aaPredicted RBP14.52□□□□□ -0.09
HDAC4-216ENST00000544989 ARID4AP29374 1257 aaPredicted RBP14.52□□□□□ -0.09
HDAC4-216ENST00000544989 RASGRF1Q13972 1273 aa14.52□□□□□ -0.09
HDAC4-216ENST00000544989 CCDC158Q5M9N0 1113 aa14.52□□□□□ -0.09
HDAC4-216ENST00000544989 FAM83AQ86UY5 434 aa14.52□□□□□ -0.09
HDAC4-216ENST00000544989 ZBTB40Q9NUA8 1239 aa14.52□□□□□ -0.09
HDAC4-216ENST00000544989 UBE2Q2LH0YL09 131 aa14.51□□□□□ -0.09
HDAC4-216ENST00000544989 GRIK5Q16478 980 aa14.51□□□□□ -0.09
HDAC4-216ENST00000544989 TNNI3KQ59H18 835 aa14.51□□□□□ -0.09
HDAC4-216ENST00000544989 LDLRAD1Q5T700 205 aa14.51□□□□□ -0.09
HDAC4-216ENST00000544989 APOBEC3HQ6NTF7 200 aaKnown RBP14.51□□□□□ -0.09
HDAC4-216ENST00000544989 DZIP1Q86YF9 867 aaKnown RBP14.51□□□□□ -0.09
HDAC4-216ENST00000544989 RASAL3Q86YV0 1011 aa14.51□□□□□ -0.09
HDAC4-216ENST00000544989 SAGE1Q9NXZ1 904 aa14.51□□□□□ -0.09
HDAC4-216ENST00000544989 ANGEL1Q9UNK9 670 aaKnown RBP14.51□□□□□ -0.09
HDAC4-216ENST00000544989 COG6Q9Y2V7 657 aa14.51□□□□□ -0.09
HDAC4-216ENST00000544989 FPGT-TNNI3KV9GXZ4 949 aa14.51□□□□□ -0.09
HDAC4-216ENST00000544989 TCP10L2B9ZVM9 353 aa14.5□□□□□ -0.09
HDAC4-216ENST00000544989 PRDX5P30044 214 aa14.5□□□□□ -0.09
HDAC4-216ENST00000544989 GSTO1P78417 241 aa14.5□□□□□ -0.09
HDAC4-216ENST00000544989 TTC39AQ5SRH9 613 aa14.5□□□□□ -0.09
HDAC4-216ENST00000544989 ERICH6Q7L0X2 663 aa14.5□□□□□ -0.09
HDAC4-216ENST00000544989 SPATA5Q8NB90 893 aa14.5□□□□□ -0.09
HDAC4-216ENST00000544989 ZNF512BQ96KM6 892 aaPredicted RBP14.5□□□□□ -0.09
HDAC4-216ENST00000544989 ABCF2Q9UG63 623 aa14.5□□□□□ -0.09
HDAC4-216ENST00000544989 DAGLAQ9Y4D2 1042 aa14.5□□□□□ -0.09
HDAC4-216ENST00000544989 RPAP1Q9BWH6 1393 aaPredicted RBP14.49□□□□□ -0.09
HDAC4-216ENST00000544989 MAP4K4O95819 1239 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms