RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 CRKP46108 304 aa13.34□□□□□ -0.27
CHEK1-218ENST00000544373 NBPF12Q5TAG4 269 aaPredicted RBP13.34□□□□□ -0.27
CHEK1-218ENST00000544373 TMEM57Q8N5G2 664 aa13.34□□□□□ -0.27
CHEK1-218ENST00000544373 CEP126Q9P2H0 1117 aa13.34□□□□□ -0.27
CHEK1-218ENST00000544373 ZNF70Q9UC06 446 aaPredicted RBP13.34□□□□□ -0.27
CHEK1-218ENST00000544373 FBXO3Q9UK99 471 aa13.34□□□□□ -0.27
CHEK1-218ENST00000544373 SRGAP3O43295 1099 aa13.34□□□□□ -0.27
CHEK1-218ENST00000544373 CA12O43570 354 aa13.34□□□□□ -0.27
CHEK1-218ENST00000544373 MYO1BO43795 1136 aa13.34□□□□□ -0.27
CHEK1-218ENST00000544373 IL15P40933 162 aaPredicted RBP13.34□□□□□ -0.27
CHEK1-218ENST00000544373 MKRN3Q13064 507 aaKnown RBP13.34□□□□□ -0.27
CHEK1-218ENST00000544373 RASA3Q14644 834 aa13.34□□□□□ -0.27
CHEK1-218ENST00000544373 ATP2B3Q16720 1220 aa13.34□□□□□ -0.27
CHEK1-218ENST00000544373 SPDYE2Q495Y8 402 aa13.34□□□□□ -0.27
CHEK1-218ENST00000544373 CDAN1Q8IWY9 1227 aa13.34□□□□□ -0.27
CHEK1-218ENST00000544373 RNF186Q9NXI6 227 aa13.34□□□□□ -0.27
CHEK1-218ENST00000544373 ANGEL1Q9UNK9 670 aaKnown RBP13.34□□□□□ -0.27
CHEK1-218ENST00000544373 HDAC5Q9UQL6 1122 aa13.34□□□□□ -0.27
CHEK1-218ENST00000544373 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.34□□□□□ -0.27
CHEK1-218ENST00000544373 SSC5DA1L4H1 1573 aa13.33□□□□□ -0.27
CHEK1-218ENST00000544373 TRPA1O75762 1119 aa13.33□□□□□ -0.28
CHEK1-218ENST00000544373 ADORA1P30542 326 aa13.33□□□□□ -0.28
CHEK1-218ENST00000544373 MTX1Q13505 466 aa13.33□□□□□ -0.28
CHEK1-218ENST00000544373 LDLRAD1Q5T700 205 aa13.33□□□□□ -0.28
CHEK1-218ENST00000544373 ZKSCAN2Q63HK3 967 aa13.33□□□□□ -0.28
CHEK1-218ENST00000544373 TBC1D22AQ8WUA7 517 aa13.33□□□□□ -0.28
CHEK1-218ENST00000544373 PAPPA2Q9BXP8 1791 aa13.32□□□□□ -0.28
CHEK1-218ENST00000544373 COL1A1P02452 1464 aaPredicted RBP13.32□□□□□ -0.28
CHEK1-218ENST00000544373 ZBED9Q6R2W3 1325 aa13.32□□□□□ -0.28
CHEK1-218ENST00000544373 PNMA6EA0A0J9YXQ4 647 aa13.32□□□□□ -0.28
CHEK1-218ENST00000544373 CACNB3P54284 484 aa13.32□□□□□ -0.28
CHEK1-218ENST00000544373 ARMC9Q7Z3E5 817 aa13.32□□□□□ -0.28
CHEK1-218ENST00000544373 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.32□□□□□ -0.28
CHEK1-218ENST00000544373 TCP10L2B9ZVM9 353 aa13.31□□□□□ -0.28
CHEK1-218ENST00000544373 GNAI2P04899 355 aa13.31□□□□□ -0.28
CHEK1-218ENST00000544373 RLBP1P12271 317 aa13.31□□□□□ -0.28
CHEK1-218ENST00000544373 PHKA1P46020 1223 aa13.31□□□□□ -0.28
CHEK1-218ENST00000544373 TIMM10P62072 90 aa13.31□□□□□ -0.28
CHEK1-218ENST00000544373 TFCP2Q12800 502 aa13.31□□□□□ -0.28
CHEK1-218ENST00000544373 CLMNQ96JQ2 1002 aa13.31□□□□□ -0.28
CHEK1-218ENST00000544373 TEPSINQ96N21 525 aa13.31□□□□□ -0.28
CHEK1-218ENST00000544373 TMEM39BQ9GZU3 492 aa13.31□□□□□ -0.28
CHEK1-218ENST00000544373 PPP2R3BQ9Y5P8 575 aa13.31□□□□□ -0.28
CHEK1-218ENST00000544373 USP2O75604 605 aaPredicted RBP13.31□□□□□ -0.28
CHEK1-218ENST00000544373 MYCNP04198 464 aaPredicted RBP13.31□□□□□ -0.28
CHEK1-218ENST00000544373 HDLBPQ00341 1268 aaKnown RBP13.31□□□□□ -0.28
CHEK1-218ENST00000544373 APOBEC3HQ6NTF7 200 aaKnown RBP13.31□□□□□ -0.28
CHEK1-218ENST00000544373 MAP3K11Q16584 847 aa13.3□□□□□ -0.28
CHEK1-218ENST00000544373 SUPT20HL1Q3ZLR7 823 aa13.3□□□□□ -0.28
CHEK1-218ENST00000544373 CCDC102BQ68D86 513 aa13.3□□□□□ -0.28
CHEK1-218ENST00000544373 TEKT1Q969V4 418 aa13.3□□□□□ -0.28
CHEK1-218ENST00000544373 MRIQ9BWK5 157 aa13.3□□□□□ -0.28
CHEK1-218ENST00000544373 PPP1R12BO60237 982 aaPredicted RBP13.29□□□□□ -0.28
CHEK1-218ENST00000544373 PRDX5P30044 214 aa13.29□□□□□ -0.28
CHEK1-218ENST00000544373 DIXDC1Q155Q3 683 aa13.29□□□□□ -0.28
CHEK1-218ENST00000544373 WDR66Q8TBY9 1149 aa13.29□□□□□ -0.28
CHEK1-218ENST00000544373 ZDHHC15Q96MV8 337 aa13.29□□□□□ -0.28
CHEK1-218ENST00000544373 C1orf115Q9H7X2 142 aa13.29□□□□□ -0.28
CHEK1-218ENST00000544373 SAGE1Q9NXZ1 904 aa13.29□□□□□ -0.28
CHEK1-218ENST00000544373 SUGT1Q9Y2Z0 365 aa13.29□□□□□ -0.28
CHEK1-218ENST00000544373 A0A1B0GUL7 405 aa13.28□□□□□ -0.28
CHEK1-218ENST00000544373 TNFAIP1Q13829 316 aa13.28□□□□□ -0.28
CHEK1-218ENST00000544373 SPRYD7Q5W111 196 aa13.28□□□□□ -0.28
CHEK1-218ENST00000544373 SLC10A4Q96EP9 437 aa13.28□□□□□ -0.28
CHEK1-218ENST00000544373 ABHD8Q96I13 439 aa13.28□□□□□ -0.28
CHEK1-218ENST00000544373 TBC1D8O95759 1140 aa13.28□□□□□ -0.28
CHEK1-218ENST00000544373 TM4SF4P48230 202 aa13.28□□□□□ -0.28
CHEK1-218ENST00000544373 RASGRF1Q13972 1273 aa13.28□□□□□ -0.28
CHEK1-218ENST00000544373 HHIPL2Q6UWX4 724 aa13.28□□□□□ -0.28
CHEK1-218ENST00000544373 XAGE2Q96GT9 111 aa13.28□□□□□ -0.28
CHEK1-218ENST00000544373 GNL3LQ9NVN8 582 aaKnown RBP13.28□□□□□ -0.28
CHEK1-218ENST00000544373 ZBTB7BO15156 539 aaPredicted RBP13.27□□□□□ -0.29
CHEK1-218ENST00000544373 ITPRIPQ8IWB1 547 aa13.27□□□□□ -0.29
CHEK1-218ENST00000544373 FTSJ3Q8IY81 847 aaKnown RBP13.27□□□□□ -0.29
CHEK1-218ENST00000544373 REM2Q8IYK8 340 aaPredicted RBP13.27□□□□□ -0.29
CHEK1-218ENST00000544373 DAGLAQ9Y4D2 1042 aa13.27□□□□□ -0.29
CHEK1-218ENST00000544373 GJA5P36382 358 aa13.26□□□□□ -0.29
CHEK1-218ENST00000544373 IREB2P48200 963 aaKnown RBP13.26□□□□□ -0.29
CHEK1-218ENST00000544373 POLA2Q14181 598 aa13.26□□□□□ -0.29
CHEK1-218ENST00000544373 PANK1Q8TE04 598 aa13.26□□□□□ -0.29
CHEK1-218ENST00000544373 NEUROD6Q96NK8 337 aa13.26□□□□□ -0.29
CHEK1-218ENST00000544373 MCOLN1Q9GZU1 580 aa13.26□□□□□ -0.29
CHEK1-218ENST00000544373 R3HDMLQ9H3Y0 253 aa13.26□□□□□ -0.29
CHEK1-218ENST00000544373 DENND2AQ9ULE3 1009 aa13.26□□□□□ -0.29
CHEK1-218ENST00000544373 CASP8AP2Q9UKL3 1982 aa13.25□□□□□ -0.29
CHEK1-218ENST00000544373 SEMA3EO15041 775 aa13.25□□□□□ -0.29
CHEK1-218ENST00000544373 LDHBP07195 334 aaKnown RBP13.25□□□□□ -0.29
CHEK1-218ENST00000544373 TNNI2P48788 182 aa13.25□□□□□ -0.29
CHEK1-218ENST00000544373 ATP8B2P98198 1209 aa13.25□□□□□ -0.29
CHEK1-218ENST00000544373 G3BP1Q13283 466 aaKnown RBP eCLIP13.25□□□□□ -0.29
CHEK1-218ENST00000544373 WNK4Q96J92 1243 aa13.25□□□□□ -0.29
CHEK1-218ENST00000544373 AKAP2Q9Y2D5 859 aa13.25□□□□□ -0.29
CHEK1-218ENST00000544373 MAST3O60307 1309 aa13.25□□□□□ -0.29
CHEK1-218ENST00000544373 SALL1Q9NSC2 1324 aa13.25□□□□□ -0.29
CHEK1-218ENST00000544373 NFIAQ12857 509 aa13.24□□□□□ -0.29
CHEK1-218ENST00000544373 DGKZQ13574 1117 aa13.24□□□□□ -0.29
CHEK1-218ENST00000544373 CDC42EP5Q6NZY7 148 aa13.24□□□□□ -0.29
CHEK1-218ENST00000544373 PI16Q6UXB8 463 aa13.24□□□□□ -0.29
CHEK1-218ENST00000544373 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.24□□□□□ -0.29
CHEK1-218ENST00000544373 ANKRD13AQ8IZ07 590 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms