RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 ABCC6O95255 1503 aa11.83□□□□□ -0.52
TCF4-209ENST00000544241 BIN1O00499 593 aa11.83□□□□□ -0.52
TCF4-209ENST00000544241 ATP1A3P13637 1013 aa11.83□□□□□ -0.52
TCF4-209ENST00000544241 TBX2Q13207 712 aaPredicted RBP11.83□□□□□ -0.52
TCF4-209ENST00000544241 MTHFSDQ2M296 383 aaKnown RBP11.83□□□□□ -0.52
TCF4-209ENST00000544241 HDGFL1Q5TGJ6 251 aa11.83□□□□□ -0.52
TCF4-209ENST00000544241 SYNE3Q6ZMZ3 975 aa11.83□□□□□ -0.52
TCF4-209ENST00000544241 FTOQ9C0B1 505 aaKnown RBP eCLIP11.83□□□□□ -0.52
TCF4-209ENST00000544241 MYO1AQ9UBC5 1043 aa11.83□□□□□ -0.52
TCF4-209ENST00000544241 DACH1Q9UI36 760 aa11.83□□□□□ -0.52
TCF4-209ENST00000544241 TUBE1Q9UJT0 475 aa11.83□□□□□ -0.52
TCF4-209ENST00000544241 ATXN2Q99700 1313 aaKnown RBP11.82□□□□□ -0.52
TCF4-209ENST00000544241 A0A0D9SFI3 127 aa11.82□□□□□ -0.52
TCF4-209ENST00000544241 N4BP1O75113 896 aaKnown RBP11.82□□□□□ -0.52
TCF4-209ENST00000544241 TAF5LO75529 589 aa11.82□□□□□ -0.52
TCF4-209ENST00000544241 GBP6Q6ZN66 633 aa11.82□□□□□ -0.52
TCF4-209ENST00000544241 JMYQ8N9B5 988 aa11.82□□□□□ -0.52
TCF4-209ENST00000544241 CCDC148Q8NFR7 591 aa11.82□□□□□ -0.52
TCF4-209ENST00000544241 GIMAP7Q8NHV1 300 aa11.82□□□□□ -0.52
TCF4-209ENST00000544241 SIL1Q9H173 461 aa11.82□□□□□ -0.52
TCF4-209ENST00000544241 RFX7Q2KHR2 1363 aa11.82□□□□□ -0.52
TCF4-209ENST00000544241 NBPF7P0C2Y1 421 aaPredicted RBP11.81□□□□□ -0.52
TCF4-209ENST00000544241 RDXP35241 583 aaKnown RBP11.81□□□□□ -0.52
TCF4-209ENST00000544241 DHX32Q7L7V1 743 aaKnown RBP11.81□□□□□ -0.52
TCF4-209ENST00000544241 MON2Q7Z3U7 1717 aa11.81□□□□□ -0.52
TCF4-209ENST00000544241 PANX2Q96RD6 677 aa11.81□□□□□ -0.52
TCF4-209ENST00000544241 PUF60Q9UHX1 559 aaKnown RBP11.81□□□□□ -0.52
TCF4-209ENST00000544241 SIGLEC1Q9BZZ2 1709 aa11.81□□□□□ -0.52
TCF4-209ENST00000544241 CEP170BQ9Y4F5 1589 aaPredicted RBP11.81□□□□□ -0.52
TCF4-209ENST00000544241 SHOX2O60902 331 aaPredicted RBP11.81□□□□□ -0.52
TCF4-209ENST00000544241 PHACTR2O75167 634 aa11.81□□□□□ -0.52
TCF4-209ENST00000544241 HNRNPH1P31943 449 aaKnown RBP11.81□□□□□ -0.52
TCF4-209ENST00000544241 TOGARAM2Q6ZUX3 1019 aa11.81□□□□□ -0.52
TCF4-209ENST00000544241 PNKPQ96T60 521 aa11.81□□□□□ -0.52
TCF4-209ENST00000544241 HSD3B7Q9H2F3 369 aa11.81□□□□□ -0.52
TCF4-209ENST00000544241 C19orf44Q9H6X5 657 aa11.81□□□□□ -0.52
TCF4-209ENST00000544241 ZSWIM4Q9H7M6 989 aa11.81□□□□□ -0.52
TCF4-209ENST00000544241 ZRANB1Q9UGI0 708 aa11.81□□□□□ -0.52
TCF4-209ENST00000544241 INPP5BP32019 993 aa11.8□□□□□ -0.52
TCF4-209ENST00000544241 SYKP43405 635 aa11.8□□□□□ -0.52
TCF4-209ENST00000544241 G3BP1Q13283 466 aaKnown RBP eCLIP11.8□□□□□ -0.52
TCF4-209ENST00000544241 B4GALNT4Q76KP1 1039 aa11.8□□□□□ -0.52
TCF4-209ENST00000544241 TC2NQ8N9U0 490 aa11.8□□□□□ -0.52
TCF4-209ENST00000544241 ZNF274Q96GC6 653 aaPredicted RBP11.8□□□□□ -0.52
TCF4-209ENST00000544241 CABS1Q96KC9 395 aa11.8□□□□□ -0.52
TCF4-209ENST00000544241 CARD10Q9BWT7 1032 aa11.8□□□□□ -0.52
TCF4-209ENST00000544241 TTF2Q9UNY4 1162 aaKnown RBP11.8□□□□□ -0.52
TCF4-209ENST00000544241 RGPD1P0DJD0 1748 aa11.8□□□□□ -0.52
TCF4-209ENST00000544241 GNAT3A8MTJ3 354 aa11.8□□□□□ -0.52
TCF4-209ENST00000544241 EXOC5O00471 708 aa11.8□□□□□ -0.52
TCF4-209ENST00000544241 HOXB7P09629 217 aa11.8□□□□□ -0.52
TCF4-209ENST00000544241 VSNL1P62760 191 aa11.8□□□□□ -0.52
TCF4-209ENST00000544241 DDR1Q08345 913 aa11.8□□□□□ -0.52
TCF4-209ENST00000544241 BEND3Q5T5X7 828 aa11.8□□□□□ -0.52
TCF4-209ENST00000544241 NBPF6Q5VWK0 638 aa11.8□□□□□ -0.52
TCF4-209ENST00000544241 FAM76AQ8TAV0 307 aa11.8□□□□□ -0.52
TCF4-209ENST00000544241 NECTIN2Q92692 538 aa11.8□□□□□ -0.52
TCF4-209ENST00000544241 NBPF4Q96M43 638 aa11.8□□□□□ -0.52
TCF4-209ENST00000544241 FAM169AQ9Y6X4 670 aa11.8□□□□□ -0.52
TCF4-209ENST00000544241 SALL1Q9NSC2 1324 aa11.79□□□□□ -0.52
TCF4-209ENST00000544241 TMCO5BA8MYB1 307 aa11.79□□□□□ -0.52
TCF4-209ENST00000544241 AKR1B15C9JRZ8 316 aaPredicted RBP11.79□□□□□ -0.52
TCF4-209ENST00000544241 C21orf2O43822 256 aa11.79□□□□□ -0.52
TCF4-209ENST00000544241 PFKFB1P16118 471 aa11.79□□□□□ -0.52
TCF4-209ENST00000544241 NEDD9Q14511 834 aa11.79□□□□□ -0.52
TCF4-209ENST00000544241 TAF7Q15545 349 aaPredicted RBP11.79□□□□□ -0.52
TCF4-209ENST00000544241 CNPY4Q8N129 248 aa11.79□□□□□ -0.52
TCF4-209ENST00000544241 DPF2Q92785 391 aa11.79□□□□□ -0.52
TCF4-209ENST00000544241 NUDT16Q96DE0 195 aaKnown RBP11.79□□□□□ -0.52
TCF4-209ENST00000544241 RPGRIP1Q96KN7 1286 aa11.79□□□□□ -0.52
TCF4-209ENST00000544241 NAPGQ99747 312 aaPredicted RBP11.79□□□□□ -0.52
TCF4-209ENST00000544241 CRACR2AQ9BSW2 395 aa11.79□□□□□ -0.52
TCF4-209ENST00000544241 KDRP35968 1356 aa11.79□□□□□ -0.52
TCF4-209ENST00000544241 C3P01024 1663 aa11.79□□□□□ -0.52
TCF4-209ENST00000544241 TMEM131LA2VDJ0 1609 aa11.79□□□□□ -0.52
TCF4-209ENST00000544241 NEDD4P46934 1319 aa11.79□□□□□ -0.52
TCF4-209ENST00000544241 CARMIL3Q8ND23 1372 aa11.79□□□□□ -0.52
TCF4-209ENST00000544241 KIAA0754O94854 1291 aa11.79□□□□□ -0.52
TCF4-209ENST00000544241 RHOXF2BP0C7M4 288 aa11.79□□□□□ -0.52
TCF4-209ENST00000544241 LIG3P49916 1009 aa11.79□□□□□ -0.52
TCF4-209ENST00000544241 KARSQ15046 597 aaKnown RBP11.79□□□□□ -0.52
TCF4-209ENST00000544241 ELOA2Q8IYF1 753 aaPredicted RBP11.79□□□□□ -0.52
TCF4-209ENST00000544241 ANKRD24Q8TF21 1146 aa11.79□□□□□ -0.52
TCF4-209ENST00000544241 RHOXF2Q9BQY4 288 aa11.79□□□□□ -0.52
TCF4-209ENST00000544241 RBM28Q9NW13 759 aaKnown RBP11.79□□□□□ -0.52
TCF4-209ENST00000544241 NCAPD2Q15021 1401 aa11.78□□□□□ -0.52
TCF4-209ENST00000544241 H0YHG0 523 aa11.78□□□□□ -0.52
TCF4-209ENST00000544241 PRPF6O94906 941 aaKnown RBP11.78□□□□□ -0.52
TCF4-209ENST00000544241 ERCC3P19447 782 aa11.78□□□□□ -0.52
TCF4-209ENST00000544241 MICALCLQ6ZW33 695 aa11.78□□□□□ -0.52
TCF4-209ENST00000544241 NUTM2AQ8IVF1 878 aaPredicted RBP11.78□□□□□ -0.52
TCF4-209ENST00000544241 PRPF38AQ8NAV1 312 aaKnown RBP11.78□□□□□ -0.52
TCF4-209ENST00000544241 AGXT2Q9BYV1 514 aa11.78□□□□□ -0.52
TCF4-209ENST00000544241 FANCLQ9NW38 375 aa11.78□□□□□ -0.52
TCF4-209ENST00000544241 C9orf78Q9NZ63 289 aaPredicted RBP11.78□□□□□ -0.52
TCF4-209ENST00000544241 CPS1P31327 1500 aa11.78□□□□□ -0.52
TCF4-209ENST00000544241 MAP3K19Q56UN5 1328 aa11.78□□□□□ -0.52
TCF4-209ENST00000544241 LRRIQ3A6PVS8 624 aaPredicted RBP11.77□□□□□ -0.52
TCF4-209ENST00000544241 ANKRD65E5RJM6 399 aa11.77□□□□□ -0.52
TCF4-209ENST00000544241 ARHGAP25P42331 645 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms