RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 ZMYM6O95789 1325 aa20.09■□□□□ 0.81
PTPRO-209ENST00000543886 ONECUT3O60422 494 aaPredicted RBP20.08■□□□□ 0.81
PTPRO-209ENST00000543886 RFC4P35249 363 aa20.08■□□□□ 0.81
PTPRO-209ENST00000543886 CAVIN4Q5BKX8 364 aa20.08■□□□□ 0.81
PTPRO-209ENST00000543886 ANP32BQ92688 251 aaKnown RBP20.08■□□□□ 0.81
PTPRO-209ENST00000543886 NCOA5Q9HCD5 579 aaKnown RBP20.08■□□□□ 0.81
PTPRO-209ENST00000543886 ZNF804BA4D1E1 1349 aa20.08■□□□□ 0.8
PTPRO-209ENST00000543886 PATL2C9JE40 543 aaKnown RBP20.07■□□□□ 0.8
PTPRO-209ENST00000543886 NPHP1O15259 732 aa20.07■□□□□ 0.8
PTPRO-209ENST00000543886 CTDNEP1O95476 244 aa20.07■□□□□ 0.8
PTPRO-209ENST00000543886 ALX1Q15699 326 aa20.07■□□□□ 0.8
PTPRO-209ENST00000543886 TPRNQ4KMQ1 711 aa20.07■□□□□ 0.8
PTPRO-209ENST00000543886 VPS37DQ86XT2 251 aa20.07■□□□□ 0.8
PTPRO-209ENST00000543886 TBC1D10CQ8IV04 446 aa20.07■□□□□ 0.8
PTPRO-209ENST00000543886 NBPF3Q9H094 633 aa20.07■□□□□ 0.8
PTPRO-209ENST00000543886 GYG1P46976 350 aa20.07■□□□□ 0.8
PTPRO-209ENST00000543886 ANTXR2P58335 489 aa20.07■□□□□ 0.8
PTPRO-209ENST00000543886 TRAPPC3LQ5T215 181 aa20.07■□□□□ 0.8
PTPRO-209ENST00000543886 CCDC183Q5T5S1 534 aa20.07■□□□□ 0.8
PTPRO-209ENST00000543886 AEBP2Q6ZN18 517 aaPredicted RBP20.07■□□□□ 0.8
PTPRO-209ENST00000543886 NAPBQ9H115 298 aa20.07■□□□□ 0.8
PTPRO-209ENST00000543886 ARMT1Q9H993 441 aa20.07■□□□□ 0.8
PTPRO-209ENST00000543886 GPHNQ9NQX3 736 aaPredicted RBP20.07■□□□□ 0.8
PTPRO-209ENST00000543886 IQSEC3Q9UPP2 1182 aaPredicted RBP20.07■□□□□ 0.8
PTPRO-209ENST00000543886 GNAT2P19087 354 aa20.06■□□□□ 0.8
PTPRO-209ENST00000543886 RPS8P62241 208 aaKnown RBP20.06■□□□□ 0.8
PTPRO-209ENST00000543886 AMIGO3Q86WK7 504 aa20.06■□□□□ 0.8
PTPRO-209ENST00000543886 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.06■□□□□ 0.8
PTPRO-209ENST00000543886 KLF18A0A0U1RQI7 1052 aa20.06■□□□□ 0.8
PTPRO-209ENST00000543886 GOLGA8BA8MQT2 603 aa20.06■□□□□ 0.8
PTPRO-209ENST00000543886 NAA16Q6N069 864 aaPredicted RBP20.06■□□□□ 0.8
PTPRO-209ENST00000543886 BCL11BQ9C0K0 894 aaPredicted RBP20.06■□□□□ 0.8
PTPRO-209ENST00000543886 SCAND2PQ9GZW5 306 aaPredicted RBP20.06■□□□□ 0.8
PTPRO-209ENST00000543886 RBSNQ9H1K0 784 aa20.06■□□□□ 0.8
PTPRO-209ENST00000543886 ZSCAN16Q9H4T2 348 aaPredicted RBP20.06■□□□□ 0.8
PTPRO-209ENST00000543886 ELP1O95163 1332 aa20.05■□□□□ 0.8
PTPRO-209ENST00000543886 PNPLA7Q6ZV29 1317 aa20.05■□□□□ 0.8
PTPRO-209ENST00000543886 SALL1Q9NSC2 1324 aa20.05■□□□□ 0.8
PTPRO-209ENST00000543886 DHX16O60231 1041 aaKnown RBP20.05■□□□□ 0.8
PTPRO-209ENST00000543886 FAM173BQ6P4H8 233 aa20.05■□□□□ 0.8
PTPRO-209ENST00000543886 IFNL3Q8IZI9 196 aa20.05■□□□□ 0.8
PTPRO-209ENST00000543886 NACAP1Q9BZK3 213 aa20.05■□□□□ 0.8
PTPRO-209ENST00000543886 RESTQ13127 1097 aa20.04■□□□□ 0.8
PTPRO-209ENST00000543886 FAM196AQ6ZSG2 479 aa20.04■□□□□ 0.8
PTPRO-209ENST00000543886 CCDC24Q8N4L8 307 aa20.04■□□□□ 0.8
PTPRO-209ENST00000543886 ANKRD2Q9GZV1 360 aa20.04■□□□□ 0.8
PTPRO-209ENST00000543886 TSPY26PQ9H489 355 aa20.04■□□□□ 0.8
PTPRO-209ENST00000543886 EPB41L4AQ9HCS5 686 aaPredicted RBP20.04■□□□□ 0.8
PTPRO-209ENST00000543886 ABCF2Q9UG63 623 aa20.04■□□□□ 0.8
PTPRO-209ENST00000543886 DENND2AQ9ULE3 1009 aa20.04■□□□□ 0.8
PTPRO-209ENST00000543886 CARMIL3Q8ND23 1372 aa20.03■□□□□ 0.8
PTPRO-209ENST00000543886 CHD4Q14839 1912 aa20.03■□□□□ 0.8
PTPRO-209ENST00000543886 LETM1O95202 739 aaPredicted RBP20.03■□□□□ 0.8
PTPRO-209ENST00000543886 FOSBP53539 338 aa20.03■□□□□ 0.8
PTPRO-209ENST00000543886 TTC6Q86TZ1 520 aa20.03■□□□□ 0.8
PTPRO-209ENST00000543886 LCORLQ8N3X6 602 aa20.03■□□□□ 0.8
PTPRO-209ENST00000543886 SPATA32Q96LK8 384 aa20.03■□□□□ 0.8
PTPRO-209ENST00000543886 RAI14Q9P0K7 980 aa20.03■□□□□ 0.8
PTPRO-209ENST00000543886 SLC4A4Q9Y6R1 1079 aa20.03■□□□□ 0.8
PTPRO-209ENST00000543886 CYP7A1P22680 504 aa20.03■□□□□ 0.8
PTPRO-209ENST00000543886 TDO2P48775 406 aa20.03■□□□□ 0.8
PTPRO-209ENST00000543886 ANGEL1Q9UNK9 670 aaKnown RBP20.03■□□□□ 0.8
PTPRO-209ENST00000543886 COL1A1P02452 1464 aaPredicted RBP20.02■□□□□ 0.8
PTPRO-209ENST00000543886 TIAM2Q8IVF5 1701 aa20.02■□□□□ 0.8
PTPRO-209ENST00000543886 WTIPA6NIX2 430 aaPredicted RBP20.02■□□□□ 0.8
PTPRO-209ENST00000543886 GSG1L2A8MUP6 293 aa20.02■□□□□ 0.8
PTPRO-209ENST00000543886 B4E1Z4 1266 aa20.02■□□□□ 0.8
PTPRO-209ENST00000543886 CCDC173Q0VFZ6 552 aa20.02■□□□□ 0.8
PTPRO-209ENST00000543886 MIGA1Q8NAN2 632 aa20.02■□□□□ 0.8
PTPRO-209ENST00000543886 NEDD4P46934 1319 aa20.01■□□□□ 0.79
PTPRO-209ENST00000543886 CPLX1O14810 134 aa20.01■□□□□ 0.79
PTPRO-209ENST00000543886 ADRA2BP18089 450 aa20.01■□□□□ 0.79
PTPRO-209ENST00000543886 CYB5R4Q7L1T6 521 aa20.01■□□□□ 0.79
PTPRO-209ENST00000543886 FAM84BQ96KN1 310 aaPredicted RBP20.01■□□□□ 0.79
PTPRO-209ENST00000543886 TFIP11Q9UBB9 837 aaKnown RBP20.01■□□□□ 0.79
PTPRO-209ENST00000543886 HPS5Q9UPZ3 1129 aa20.01■□□□□ 0.79
PTPRO-209ENST00000543886 TNRC6CQ9HCJ0 1690 aaKnown RBP20.01■□□□□ 0.79
PTPRO-209ENST00000543886 SEMA3EO15041 775 aa20.01■□□□□ 0.79
PTPRO-209ENST00000543886 TMEM87BQ96K49 555 aa20.01■□□□□ 0.79
PTPRO-209ENST00000543886 CNNM2Q9H8M5 875 aa20.01■□□□□ 0.79
PTPRO-209ENST00000543886 GOLGA6L4A6NEF3 574 aa20■□□□□ 0.79
PTPRO-209ENST00000543886 SH2B2O14492 632 aaPredicted RBP20■□□□□ 0.79
PTPRO-209ENST00000543886 PRKAB2O43741 272 aa20■□□□□ 0.79
PTPRO-209ENST00000543886 LEO1Q8WVC0 666 aaPredicted RBP20■□□□□ 0.79
PTPRO-209ENST00000543886 QTRT2Q9H974 415 aaKnown RBP20■□□□□ 0.79
PTPRO-209ENST00000543886 MYH15Q9Y2K3 1946 aa20■□□□□ 0.79
PTPRO-209ENST00000543886 MYH13Q9UKX3 1938 aa19.99■□□□□ 0.79
PTPRO-209ENST00000543886 MAGEB6P1A0A0J9YX57 407 aa19.99■□□□□ 0.79
PTPRO-209ENST00000543886 PPFIA3O75145 1194 aa19.99■□□□□ 0.79
PTPRO-209ENST00000543886 PRKCSHP14314 528 aaPredicted RBP19.99■□□□□ 0.79
PTPRO-209ENST00000543886 CTDSPL2Q05D32 466 aa19.99■□□□□ 0.79
PTPRO-209ENST00000543886 NFIXQ14938 502 aa19.99■□□□□ 0.79
PTPRO-209ENST00000543886 FBXO33Q7Z6M2 555 aa19.99■□□□□ 0.79
PTPRO-209ENST00000543886 KRT23Q9C075 422 aa19.99■□□□□ 0.79
PTPRO-209ENST00000543886 LRRC4BQ9NT99 713 aa19.99■□□□□ 0.79
PTPRO-209ENST00000543886 CFAP45Q9UL16 551 aa19.99■□□□□ 0.79
PTPRO-209ENST00000543886 AKNAD1Q5T1N1 836 aa19.99■□□□□ 0.79
PTPRO-209ENST00000543886 MFSD6Q6ZSS7 791 aa19.99■□□□□ 0.79
PTPRO-209ENST00000543886 CNBD1Q8NA66 436 aa19.99■□□□□ 0.79
PTPRO-209ENST00000543886 RAB11FIP4Q86YS3 637 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms