RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 TMEM139Q8IV31 216 aa14.52□□□□□ -0.08
SMG8-202ENST00000543872 A0A1W2PQ27 194 aa14.52□□□□□ -0.09
SMG8-202ENST00000543872 A0A1W2PQ64 194 aa14.52□□□□□ -0.09
SMG8-202ENST00000543872 A0A1W2PQD8 194 aa14.52□□□□□ -0.09
SMG8-202ENST00000543872 IKBKBO14920 756 aa14.52□□□□□ -0.09
SMG8-202ENST00000543872 FCHSD1Q86WN1 690 aa14.52□□□□□ -0.09
SMG8-202ENST00000543872 ALDH1L1O75891 902 aa14.51□□□□□ -0.09
SMG8-202ENST00000543872 SYKP43405 635 aa14.51□□□□□ -0.09
SMG8-202ENST00000543872 ATL3Q6DD88 541 aa14.51□□□□□ -0.09
SMG8-202ENST00000543872 DHX32Q7L7V1 743 aaKnown RBP14.51□□□□□ -0.09
SMG8-202ENST00000543872 CCDC91Q7Z6B0 441 aa14.51□□□□□ -0.09
SMG8-202ENST00000543872 MAP3K2Q9Y2U5 619 aa14.51□□□□□ -0.09
SMG8-202ENST00000543872 KCNQ3O43525 872 aa14.51□□□□□ -0.09
SMG8-202ENST00000543872 MCTP2Q6DN12 878 aa14.51□□□□□ -0.09
SMG8-202ENST00000543872 MMS22LQ6ZRQ5 1243 aa14.51□□□□□ -0.09
SMG8-202ENST00000543872 STK11IPQ8N1F8 1099 aa14.51□□□□□ -0.09
SMG8-202ENST00000543872 KCNG4Q8TDN1 519 aa14.51□□□□□ -0.09
SMG8-202ENST00000543872 C8orf76Q96K31 380 aa14.51□□□□□ -0.09
SMG8-202ENST00000543872 U3KPZ7 1027 aaPredicted RBP14.51□□□□□ -0.09
SMG8-202ENST00000543872 TADA2BQ86TJ2 420 aa14.51□□□□□ -0.09
SMG8-202ENST00000543872 GPHNQ9NQX3 736 aaPredicted RBP14.51□□□□□ -0.09
SMG8-202ENST00000543872 A0A0G2JLW4 131 aa14.5□□□□□ -0.09
SMG8-202ENST00000543872 SOWAHDA6NJG2 315 aa14.5□□□□□ -0.09
SMG8-202ENST00000543872 DDX46Q7L014 1031 aaKnown RBP14.5□□□□□ -0.09
SMG8-202ENST00000543872 USHBP1Q8N6Y0 703 aa14.5□□□□□ -0.09
SMG8-202ENST00000543872 INTS13Q9NVM9 706 aa14.5□□□□□ -0.09
SMG8-202ENST00000543872 ARAP3Q8WWN8 1544 aa14.5□□□□□ -0.09
SMG8-202ENST00000543872 MED23Q9ULK4 1368 aa14.5□□□□□ -0.09
SMG8-202ENST00000543872 KIF5CO60282 957 aa14.5□□□□□ -0.09
SMG8-202ENST00000543872 AIMP1Q12904 312 aaKnown RBP14.5□□□□□ -0.09
SMG8-202ENST00000543872 ACEP12821 1306 aa14.5□□□□□ -0.09
SMG8-202ENST00000543872 STX10O60499 249 aa14.5□□□□□ -0.09
SMG8-202ENST00000543872 PPFIA4O75335 1185 aa14.5□□□□□ -0.09
SMG8-202ENST00000543872 TRMT44Q8IYL2 757 aaKnown RBP14.5□□□□□ -0.09
SMG8-202ENST00000543872 TC2NQ8N9U0 490 aa14.5□□□□□ -0.09
SMG8-202ENST00000543872 CDC23Q9UJX2 597 aa14.5□□□□□ -0.09
SMG8-202ENST00000543872 PRR36Q9H6K5 1346 aa14.49□□□□□ -0.09
SMG8-202ENST00000543872 RNF40O75150 1001 aa14.49□□□□□ -0.09
SMG8-202ENST00000543872 CCDC175P0C221 793 aa14.49□□□□□ -0.09
SMG8-202ENST00000543872 AKAP17AQ02040 695 aaKnown RBP14.49□□□□□ -0.09
SMG8-202ENST00000543872 EFCAB13Q8IY85 973 aa14.49□□□□□ -0.09
SMG8-202ENST00000543872 CEP112Q8N8E3 955 aa14.49□□□□□ -0.09
SMG8-202ENST00000543872 FAM71BQ8TC56 605 aa14.49□□□□□ -0.09
SMG8-202ENST00000543872 RIN2Q8WYP3 895 aaPredicted RBP14.49□□□□□ -0.09
SMG8-202ENST00000543872 NEDD4P46934 1319 aa14.49□□□□□ -0.09
SMG8-202ENST00000543872 LRRIQ3A6PVS8 624 aaPredicted RBP14.49□□□□□ -0.09
SMG8-202ENST00000543872 SUCLG2Q96I99 432 aa14.49□□□□□ -0.09
SMG8-202ENST00000543872 COL15A1P39059 1388 aa14.49□□□□□ -0.09
SMG8-202ENST00000543872 PIK3C2BO00750 1634 aa14.49□□□□□ -0.09
SMG8-202ENST00000543872 ERLIN2O94905 339 aa14.49□□□□□ -0.09
SMG8-202ENST00000543872 PDIA3P30101 505 aaKnown RBP14.49□□□□□ -0.09
SMG8-202ENST00000543872 AFAP1L1Q8TED9 768 aa14.49□□□□□ -0.09
SMG8-202ENST00000543872 A0A087WUV0 522 aaPredicted RBP14.48□□□□□ -0.09
SMG8-202ENST00000543872 FDPSP14324 419 aaKnown RBP14.48□□□□□ -0.09
SMG8-202ENST00000543872 MAP2K2P36507 400 aa14.48□□□□□ -0.09
SMG8-202ENST00000543872 PLEKHO1Q53GL0 409 aaPredicted RBP14.48□□□□□ -0.09
SMG8-202ENST00000543872 MYSM1Q5VVJ2 828 aa14.48□□□□□ -0.09
SMG8-202ENST00000543872 FBXW10Q5XX13 1052 aa14.48□□□□□ -0.09
SMG8-202ENST00000543872 ANKRD20A12PQ8NF67 263 aa14.48□□□□□ -0.09
SMG8-202ENST00000543872 ACBD3Q9H3P7 528 aa14.48□□□□□ -0.09
SMG8-202ENST00000543872 CLTCQ00610 1675 aaKnown RBP14.48□□□□□ -0.09
SMG8-202ENST00000543872 SIGLEC1Q9BZZ2 1709 aa14.48□□□□□ -0.09
SMG8-202ENST00000543872 RPS6KA5O75582 802 aa14.48□□□□□ -0.09
SMG8-202ENST00000543872 CCT5P48643 541 aa14.48□□□□□ -0.09
SMG8-202ENST00000543872 PDE4BQ07343 736 aa14.48□□□□□ -0.09
SMG8-202ENST00000543872 USPL1Q5W0Q7 1092 aa14.48□□□□□ -0.09
SMG8-202ENST00000543872 HNRNPLLQ8WVV9 542 aaKnown RBP14.48□□□□□ -0.09
SMG8-202ENST00000543872 CARMIL3Q8ND23 1372 aa14.48□□□□□ -0.09
SMG8-202ENST00000543872 POTEB2H3BUK9 544 aa14.47□□□□□ -0.09
SMG8-202ENST00000543872 GOLIM4O00461 696 aa14.47□□□□□ -0.09
SMG8-202ENST00000543872 ANO1Q5XXA6 986 aa14.47□□□□□ -0.09
SMG8-202ENST00000543872 SPECC1LQ69YQ0 1117 aa14.47□□□□□ -0.09
SMG8-202ENST00000543872 SMARCC1Q92922 1105 aaPredicted RBP14.47□□□□□ -0.09
SMG8-202ENST00000543872 ALKQ9UM73 1620 aa14.47□□□□□ -0.09
SMG8-202ENST00000543872 CTAGE15A4D2H0 777 aa14.47□□□□□ -0.09
SMG8-202ENST00000543872 CTAGE8P0CG41 777 aa14.47□□□□□ -0.09
SMG8-202ENST00000543872 IBSPP21815 317 aaPredicted RBP14.47□□□□□ -0.09
SMG8-202ENST00000543872 ZNF827Q17R98 1081 aa14.47□□□□□ -0.09
SMG8-202ENST00000543872 SPECC1Q5M775 1068 aa14.47□□□□□ -0.09
SMG8-202ENST00000543872 CTAGE6Q86UF2 777 aa14.47□□□□□ -0.09
SMG8-202ENST00000543872 CTAGE4Q8IX94 777 aa14.47□□□□□ -0.09
SMG8-202ENST00000543872 CLIC6Q96NY7 704 aa14.47□□□□□ -0.09
SMG8-202ENST00000543872 CDC5LQ99459 802 aaKnown RBP14.47□□□□□ -0.09
SMG8-202ENST00000543872 HECW2Q9P2P5 1572 aa14.47□□□□□ -0.09
SMG8-202ENST00000543872 IRF6O14896 467 aa14.47□□□□□ -0.09
SMG8-202ENST00000543872 CMA1P23946 247 aa14.47□□□□□ -0.09
SMG8-202ENST00000543872 MCMDC2Q4G0Z9 681 aa14.47□□□□□ -0.09
SMG8-202ENST00000543872 GRIPAP1Q4V328 841 aa14.47□□□□□ -0.09
SMG8-202ENST00000543872 RNF217Q8TC41 542 aa14.47□□□□□ -0.09
SMG8-202ENST00000543872 HINFPQ9BQA5 517 aa14.47□□□□□ -0.09
SMG8-202ENST00000543872 NFE2L3Q9Y4A8 694 aa14.47□□□□□ -0.09
SMG8-202ENST00000543872 PCDHA5Q9Y5H7 936 aa14.47□□□□□ -0.09
SMG8-202ENST00000543872 MROH7-TTC4A0A0A0MT08 1334 aa14.46□□□□□ -0.09
SMG8-202ENST00000543872 SLC35F6Q8N357 371 aa14.46□□□□□ -0.09
SMG8-202ENST00000543872 NOA1Q8NC60 698 aaKnown RBP14.46□□□□□ -0.09
SMG8-202ENST00000543872 SNRKQ9NRH2 765 aa14.46□□□□□ -0.09
SMG8-202ENST00000543872 CTAGE9A4FU28 777 aa14.46□□□□□ -0.09
SMG8-202ENST00000543872 CPLX1O14810 134 aa14.46□□□□□ -0.09
SMG8-202ENST00000543872 FOXN1O15353 648 aa14.46□□□□□ -0.09
SMG8-202ENST00000543872 YEATS4O95619 227 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms