RNA–Protein interactions for RNA: ENST00000543755.1

CD4-211, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 494 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-211ENST00000543755 CDC5LQ99459 802 aaKnown RBP11.39□□□□□ -0.59
CD4-211ENST00000543755 TAOK2Q9UL54 1235 aa11.39□□□□□ -0.59
CD4-211ENST00000543755 COL4A1P02462 1669 aa11.39□□□□□ -0.59
CD4-211ENST00000543755 ALPK3Q96L96 1907 aa11.39□□□□□ -0.59
CD4-211ENST00000543755 SPDYE2BA6NHP3 402 aa11.38□□□□□ -0.59
CD4-211ENST00000543755 SPDYE5A6NIY4 337 aa11.38□□□□□ -0.59
CD4-211ENST00000543755 SPDYE6P0CI01 402 aa11.38□□□□□ -0.59
CD4-211ENST00000543755 ERO1BQ86YB8 467 aa11.38□□□□□ -0.59
CD4-211ENST00000543755 IL27Q8NEV9 243 aa11.38□□□□□ -0.59
CD4-211ENST00000543755 PXYLP1Q8TE99 480 aa11.38□□□□□ -0.59
CD4-211ENST00000543755 CCDC85AQ96PX6 553 aaPredicted RBP11.38□□□□□ -0.59
CD4-211ENST00000543755 ISCA1Q9BUE6 129 aa11.38□□□□□ -0.59
CD4-211ENST00000543755 CRISPLD2Q9H0B8 497 aa11.38□□□□□ -0.59
CD4-211ENST00000543755 C11orf49Q9H6J7 331 aa11.38□□□□□ -0.59
CD4-211ENST00000543755 PAK6Q9NQU5 681 aaPredicted RBP11.38□□□□□ -0.59
CD4-211ENST00000543755 GABRQQ9UN88 632 aa11.38□□□□□ -0.59
CD4-211ENST00000543755 F8W031 263 aaPredicted RBP11.37□□□□□ -0.59
CD4-211ENST00000543755 TNNI2P48788 182 aa11.37□□□□□ -0.59
CD4-211ENST00000543755 CCT4P50991 539 aaKnown RBP11.37□□□□□ -0.59
CD4-211ENST00000543755 ZBTB38Q8NAP3 1195 aaPredicted RBP11.37□□□□□ -0.59
CD4-211ENST00000543755 PPM1EQ8WY54 764 aa11.37□□□□□ -0.59
CD4-211ENST00000543755 LBHD1Q9BQE6 289 aaPredicted RBP11.37□□□□□ -0.59
CD4-211ENST00000543755 COL2A1P02458 1487 aaPredicted RBP11.37□□□□□ -0.59
CD4-211ENST00000543755 CACNA1AO00555 2505 aa11.37□□□□□ -0.59
CD4-211ENST00000543755 PDHXO00330 501 aa11.36□□□□□ -0.59
CD4-211ENST00000543755 PDE8AO60658 829 aa11.36□□□□□ -0.59
CD4-211ENST00000543755 HSPA5P11021 654 aaKnown RBP11.36□□□□□ -0.59
CD4-211ENST00000543755 FLT3LGP49771 235 aa11.36□□□□□ -0.59
CD4-211ENST00000543755 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.36□□□□□ -0.59
CD4-211ENST00000543755 PRMT6Q96LA8 375 aaPredicted RBP11.36□□□□□ -0.59
CD4-211ENST00000543755 TTYH1Q9H313 450 aaPredicted RBP11.36□□□□□ -0.59
CD4-211ENST00000543755 LEMD3Q9Y2U8 911 aa11.36□□□□□ -0.59
CD4-211ENST00000543755 IRF6O14896 467 aa11.35□□□□□ -0.59
CD4-211ENST00000543755 KCNJ4P48050 445 aa11.35□□□□□ -0.59
CD4-211ENST00000543755 PPIL2Q13356 520 aa11.35□□□□□ -0.59
CD4-211ENST00000543755 ANKRD23Q86SG2 305 aa11.35□□□□□ -0.59
CD4-211ENST00000543755 PARK7Q99497 189 aaKnown RBP11.35□□□□□ -0.59
CD4-211ENST00000543755 P2RX7Q99572 595 aaKnown RBP11.35□□□□□ -0.59
CD4-211ENST00000543755 LRFN3Q9BTN0 628 aa11.35□□□□□ -0.59
CD4-211ENST00000543755 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.35□□□□□ -0.59
CD4-211ENST00000543755 MINPP1Q9UNW1 487 aa11.35□□□□□ -0.59
CD4-211ENST00000543755 OTOFQ9HC10 1997 aa11.35□□□□□ -0.59
CD4-211ENST00000543755 TNPO2O14787 897 aaKnown RBP11.34□□□□□ -0.59
CD4-211ENST00000543755 TRIM28Q13263 835 aaKnown RBP11.34□□□□□ -0.59
CD4-211ENST00000543755 IRF5Q13568 498 aa11.34□□□□□ -0.59
CD4-211ENST00000543755 ATXN2LQ8WWM7 1075 aaKnown RBP11.34□□□□□ -0.59
CD4-211ENST00000543755 HOOK2Q96ED9 719 aa11.34□□□□□ -0.59
CD4-211ENST00000543755 ASB2Q96Q27 587 aa11.34□□□□□ -0.59
CD4-211ENST00000543755 BSDC1Q9NW68 430 aaPredicted RBP11.34□□□□□ -0.59
CD4-211ENST00000543755 PCDHAC2Q9Y5I4 1007 aa11.34□□□□□ -0.59
CD4-211ENST00000543755 ECM29Q5VYK3 1845 aa11.34□□□□□ -0.59
CD4-211ENST00000543755 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.33□□□□□ -0.6
CD4-211ENST00000543755 WRNIP1Q96S55 665 aa11.33□□□□□ -0.6
CD4-211ENST00000543755 THEGQ9P2T0 379 aa11.33□□□□□ -0.6
CD4-211ENST00000543755 TIMELESSQ9UNS1 1208 aa11.33□□□□□ -0.6
CD4-211ENST00000543755 MRE11P49959 708 aa11.32□□□□□ -0.6
CD4-211ENST00000543755 PPATQ06203 517 aa11.32□□□□□ -0.6
CD4-211ENST00000543755 RIC3Q7Z5B4 369 aa11.32□□□□□ -0.6
CD4-211ENST00000543755 TXNRD3Q86VQ6 643 aa11.32□□□□□ -0.6
CD4-211ENST00000543755 COA7Q96BR5 231 aa11.32□□□□□ -0.6
CD4-211ENST00000543755 ANKRD2Q9GZV1 360 aa11.32□□□□□ -0.6
CD4-211ENST00000543755 CD209Q9NNX6 404 aa11.32□□□□□ -0.6
CD4-211ENST00000543755 HMX1Q9NP08 348 aaPredicted RBP11.32□□□□□ -0.6
CD4-211ENST00000543755 CHPF2Q9P2E5 772 aa11.32□□□□□ -0.6
CD4-211ENST00000543755 ZNF70Q9UC06 446 aaPredicted RBP11.32□□□□□ -0.6
CD4-211ENST00000543755 PRKAG2Q9UGJ0 569 aa11.32□□□□□ -0.6
CD4-211ENST00000543755 SNCAIPQ9Y6H5 919 aa11.32□□□□□ -0.6
CD4-211ENST00000543755 TCP10L2B9ZVM9 353 aa11.31□□□□□ -0.6
CD4-211ENST00000543755 PER1O15534 1290 aaPredicted RBP11.31□□□□□ -0.6
CD4-211ENST00000543755 IGHMBP2P38935 993 aaKnown RBP11.31□□□□□ -0.6
CD4-211ENST00000543755 SPDYE2Q495Y8 402 aa11.31□□□□□ -0.6
CD4-211ENST00000543755 CERS5Q8N5B7 392 aa11.31□□□□□ -0.6
CD4-211ENST00000543755 NECAB3Q96P71 396 aaPredicted RBP11.31□□□□□ -0.6
CD4-211ENST00000543755 TMEM39BQ9GZU3 492 aa11.31□□□□□ -0.6
CD4-211ENST00000543755 PCCAP05165 728 aaPredicted RBP11.3□□□□□ -0.6
CD4-211ENST00000543755 BCRP11274 1271 aa11.3□□□□□ -0.6
CD4-211ENST00000543755 MRPS5P82675 430 aaKnown RBP11.3□□□□□ -0.6
CD4-211ENST00000543755 GOLGA2Q08379 1002 aa11.3□□□□□ -0.6
CD4-211ENST00000543755 NFE2L2Q16236 605 aa11.3□□□□□ -0.6
CD4-211ENST00000543755 TMEM31Q5JXX7 168 aa11.3□□□□□ -0.6
CD4-211ENST00000543755 DCAF15Q66K64 600 aa11.3□□□□□ -0.6
CD4-211ENST00000543755 ZKSCAN4Q969J2 545 aaPredicted RBP11.3□□□□□ -0.6
CD4-211ENST00000543755 TEPSINQ96N21 525 aa11.3□□□□□ -0.6
CD4-211ENST00000543755 TDRD3Q9H7E2 651 aaKnown RBP11.3□□□□□ -0.6
CD4-211ENST00000543755 BABAM1Q9NWV8 329 aa11.3□□□□□ -0.6
CD4-211ENST00000543755 DBF4Q9UBU7 674 aaPredicted RBP11.3□□□□□ -0.6
CD4-211ENST00000543755 PFASO15067 1338 aa11.3□□□□□ -0.6
CD4-211ENST00000543755 CDH23Q9H251 3354 aa11.29□□□□□ -0.6
CD4-211ENST00000543755 HMGCRP04035 888 aa11.29□□□□□ -0.6
CD4-211ENST00000543755 FKBP1AP62942 108 aaKnown RBP11.29□□□□□ -0.6
CD4-211ENST00000543755 SHHQ15465 462 aa11.29□□□□□ -0.6
CD4-211ENST00000543755 LRRC26Q2I0M4 334 aa11.29□□□□□ -0.6
CD4-211ENST00000543755 HDGFL1Q5TGJ6 251 aa11.29□□□□□ -0.6
CD4-211ENST00000543755 CDAN1Q8IWY9 1227 aa11.29□□□□□ -0.6
CD4-211ENST00000543755 CCDC191Q8NCU4 936 aa11.29□□□□□ -0.6
CD4-211ENST00000543755 HYPKQ9NX55 129 aa11.29□□□□□ -0.6
CD4-211ENST00000543755 KCNH4Q9UQ05 1017 aa11.29□□□□□ -0.6
CD4-211ENST00000543755 AOX1Q06278 1338 aa11.29□□□□□ -0.6
CD4-211ENST00000543755 MAPK8IP3Q9UPT6 1336 aa11.29□□□□□ -0.6
CD4-211ENST00000543755 CYP2C8P10632 490 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms