RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 EXOC1Q9NV70 894 aa21.97■■□□□ 1.11
SUDS3-204ENST00000543473 NBPF7P0C2Y1 421 aaPredicted RBP21.97■■□□□ 1.11
SUDS3-204ENST00000543473 KIF5BP33176 963 aa21.97■■□□□ 1.11
SUDS3-204ENST00000543473 SSR1P43307 286 aaKnown RBP21.97■■□□□ 1.11
SUDS3-204ENST00000543473 MTMR6Q9Y217 621 aa21.97■■□□□ 1.11
SUDS3-204ENST00000543473 RNF113AO15541 343 aaKnown RBP21.96■■□□□ 1.11
SUDS3-204ENST00000543473 TSPOAP1O95153 1857 aa21.96■■□□□ 1.11
SUDS3-204ENST00000543473 LUC7L2Q9Y383 392 aaKnown RBP21.96■■□□□ 1.11
SUDS3-204ENST00000543473 KIF24Q5T7B8 1368 aa21.96■■□□□ 1.11
SUDS3-204ENST00000543473 ME3Q16798 604 aa21.96■■□□□ 1.11
SUDS3-204ENST00000543473 CEP57Q86XR8 500 aa21.96■■□□□ 1.11
SUDS3-204ENST00000543473 LMTK3Q96Q04 1460 aa21.96■■□□□ 1.11
SUDS3-204ENST00000543473 EZRP15311 586 aaKnown RBP21.96■■□□□ 1.11
SUDS3-204ENST00000543473 UBXN1Q04323 297 aa21.96■■□□□ 1.11
SUDS3-204ENST00000543473 ZSCAN29Q8IWY8 852 aaPredicted RBP21.96■■□□□ 1.11
SUDS3-204ENST00000543473 ZNF76P36508 570 aa21.96■■□□□ 1.11
SUDS3-204ENST00000543473 ANO1Q5XXA6 986 aa21.96■■□□□ 1.11
SUDS3-204ENST00000543473 AFAP1L1Q8TED9 768 aa21.96■■□□□ 1.11
SUDS3-204ENST00000543473 IGSF22Q8N9C0 903 aa21.95■■□□□ 1.1
SUDS3-204ENST00000543473 CNNM2Q9H8M5 875 aa21.95■■□□□ 1.1
SUDS3-204ENST00000543473 NCOA5Q9HCD5 579 aaKnown RBP21.95■■□□□ 1.1
SUDS3-204ENST00000543473 VAV2P52735 878 aa21.95■■□□□ 1.1
SUDS3-204ENST00000543473 TCERG1LQ5VWI1 586 aa21.95■■□□□ 1.1
SUDS3-204ENST00000543473 JAK2O60674 1132 aa21.95■■□□□ 1.1
SUDS3-204ENST00000543473 TFCP2Q12800 502 aa21.95■■□□□ 1.1
SUDS3-204ENST00000543473 CCDC121Q6ZUS5 278 aa21.95■■□□□ 1.1
SUDS3-204ENST00000543473 XPO4Q9C0E2 1151 aaKnown RBP21.95■■□□□ 1.1
SUDS3-204ENST00000543473 CETN2P41208 172 aa21.95■■□□□ 1.1
SUDS3-204ENST00000543473 SLC9C2Q5TAH2 1124 aa21.95■■□□□ 1.1
SUDS3-204ENST00000543473 ZNF444Q8N0Y2 327 aaPredicted RBP21.95■■□□□ 1.1
SUDS3-204ENST00000543473 CDC5LQ99459 802 aaKnown RBP21.95■■□□□ 1.1
SUDS3-204ENST00000543473 ZNF202O95125 648 aa21.94■■□□□ 1.1
SUDS3-204ENST00000543473 NAPGQ99747 312 aaPredicted RBP21.94■■□□□ 1.1
SUDS3-204ENST00000543473 EFCAB6Q5THR3 1501 aa21.94■■□□□ 1.1
SUDS3-204ENST00000543473 TUBB2AQ13885 445 aa21.94■■□□□ 1.1
SUDS3-204ENST00000543473 ZSCAN26Q16670 478 aa21.94■■□□□ 1.1
SUDS3-204ENST00000543473 CCDC122Q5T0U0 273 aa21.94■■□□□ 1.1
SUDS3-204ENST00000543473 TUBB2BQ9BVA1 445 aa21.94■■□□□ 1.1
SUDS3-204ENST00000543473 NBPF6Q5VWK0 638 aa21.94■■□□□ 1.1
SUDS3-204ENST00000543473 RPGRQ92834 1020 aaKnown RBP21.94■■□□□ 1.1
SUDS3-204ENST00000543473 NBPF4Q96M43 638 aa21.94■■□□□ 1.1
SUDS3-204ENST00000543473 SSH2Q76I76 1423 aa21.94■■□□□ 1.1
SUDS3-204ENST00000543473 NR1I2O75469 434 aa21.94■■□□□ 1.1
SUDS3-204ENST00000543473 BICC1Q9H694 974 aaKnown RBP21.94■■□□□ 1.1
SUDS3-204ENST00000543473 HECW2Q9P2P5 1572 aa21.93■■□□□ 1.1
SUDS3-204ENST00000543473 NLRP12P59046 1061 aa21.93■■□□□ 1.1
SUDS3-204ENST00000543473 IFI16Q16666 785 aaKnown RBP21.93■■□□□ 1.1
SUDS3-204ENST00000543473 CCDC129Q6ZRS4 1044 aa21.93■■□□□ 1.1
SUDS3-204ENST00000543473 ARFGAP2Q8N6H7 521 aa21.93■■□□□ 1.1
SUDS3-204ENST00000543473 TTC6Q86TZ1 520 aa21.93■■□□□ 1.1
SUDS3-204ENST00000543473 LRRC8AQ8IWT6 810 aa21.93■■□□□ 1.1
SUDS3-204ENST00000543473 KIAA1524Q8TCG1 905 aa21.93■■□□□ 1.1
SUDS3-204ENST00000543473 LGR6Q9HBX8 967 aa21.93■■□□□ 1.1
SUDS3-204ENST00000543473 PLA2R1Q13018 1463 aa21.93■■□□□ 1.1
SUDS3-204ENST00000543473 RXRAP19793 462 aa21.93■■□□□ 1.1
SUDS3-204ENST00000543473 ATP2B3Q16720 1220 aa21.93■■□□□ 1.1
SUDS3-204ENST00000543473 UQCRFS1P1P0C7P4 283 aa21.92■■□□□ 1.1
SUDS3-204ENST00000543473 RFC4P35249 363 aa21.92■■□□□ 1.1
SUDS3-204ENST00000543473 NAA16Q6N069 864 aaPredicted RBP21.92■■□□□ 1.1
SUDS3-204ENST00000543473 SLAIN2Q9P270 581 aa21.92■■□□□ 1.1
SUDS3-204ENST00000543473 PCDH11XQ9BZA7 1347 aa21.92■■□□□ 1.1
SUDS3-204ENST00000543473 PCDH11YQ9BZA8 1340 aa21.92■■□□□ 1.1
SUDS3-204ENST00000543473 MMRN2Q9H8L6 949 aa21.92■■□□□ 1.1
SUDS3-204ENST00000543473 KCNH3Q9ULD8 1083 aa21.92■■□□□ 1.1
SUDS3-204ENST00000543473 TSPY2A6NKD2 308 aa21.92■■□□□ 1.1
SUDS3-204ENST00000543473 OTUD7BQ6GQQ9 843 aa21.92■■□□□ 1.1
SUDS3-204ENST00000543473 CCDC91Q7Z6B0 441 aa21.92■■□□□ 1.1
SUDS3-204ENST00000543473 TTF2Q9UNY4 1162 aaKnown RBP21.92■■□□□ 1.1
SUDS3-204ENST00000543473 DZIP1Q86YF9 867 aaKnown RBP21.91■■□□□ 1.1
SUDS3-204ENST00000543473 MRFAP1L1Q96HT8 127 aa21.91■■□□□ 1.1
SUDS3-204ENST00000543473 CCDC114Q96M63 670 aa21.91■■□□□ 1.1
SUDS3-204ENST00000543473 SPAG5Q96R06 1193 aa21.91■■□□□ 1.1
SUDS3-204ENST00000543473 PRDM15P57071 1507 aaPredicted RBP21.91■■□□□ 1.1
SUDS3-204ENST00000543473 ESR2Q92731 530 aa21.91■■□□□ 1.1
SUDS3-204ENST00000543473 PLXNC1O60486 1568 aa21.91■■□□□ 1.1
SUDS3-204ENST00000543473 RGS12O14924 1447 aa21.91■■□□□ 1.1
SUDS3-204ENST00000543473 CCT6AP40227 531 aaKnown RBP21.9■■□□□ 1.1
SUDS3-204ENST00000543473 KIAA0753Q2KHM9 967 aa21.9■■□□□ 1.1
SUDS3-204ENST00000543473 CFAP58Q5T655 872 aa21.9■■□□□ 1.1
SUDS3-204ENST00000543473 GBP6Q6ZN66 633 aa21.9■■□□□ 1.1
SUDS3-204ENST00000543473 PPM1EQ8WY54 764 aa21.9■■□□□ 1.1
SUDS3-204ENST00000543473 ETF1P62495 437 aaKnown RBP21.9■■□□□ 1.1
SUDS3-204ENST00000543473 ZNF790Q6PG37 636 aa21.9■■□□□ 1.1
SUDS3-204ENST00000543473 NBPF5PQ86XG9 351 aaPredicted RBP21.9■■□□□ 1.1
SUDS3-204ENST00000543473 GPR161Q8N6U8 529 aaKnown RBP21.9■■□□□ 1.1
SUDS3-204ENST00000543473 UBE4AQ14139 1066 aa21.9■■□□□ 1.1
SUDS3-204ENST00000543473 MSL1Q68DK7 614 aa21.9■■□□□ 1.1
SUDS3-204ENST00000543473 CTNNBL1Q8WYA6 563 aaPredicted RBP21.9■■□□□ 1.1
SUDS3-204ENST00000543473 DDX21Q9NR30 783 aaKnown RBP eCLIP21.9■■□□□ 1.1
SUDS3-204ENST00000543473 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.9■■□□□ 1.1
SUDS3-204ENST00000543473 ERVK-7P63135 1459 aa21.9■■□□□ 1.1
SUDS3-204ENST00000543473 CDC42BPAQ5VT25 1732 aa21.9■■□□□ 1.1
SUDS3-204ENST00000543473 IFT81Q8WYA0 676 aa21.9■■□□□ 1.1
SUDS3-204ENST00000543473 KDM5CP41229 1560 aa21.89■■□□□ 1.1
SUDS3-204ENST00000543473 KAT14Q9H8E8 782 aa21.89■■□□□ 1.1
SUDS3-204ENST00000543473 HELLSQ9NRZ9 838 aa21.89■■□□□ 1.1
SUDS3-204ENST00000543473 NFE2L3Q9Y4A8 694 aa21.89■■□□□ 1.1
SUDS3-204ENST00000543473 MYOM2P54296 1465 aa21.89■■□□□ 1.1
SUDS3-204ENST00000543473 SPTY2D1Q68D10 685 aaPredicted RBP21.89■■□□□ 1.09
SUDS3-204ENST00000543473 SELENOOQ9BVL4 669 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms