RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 TRHP20396 242 aaPredicted RBP27.37■■□□□ 1.97
SHD-201ENST00000543264 SYKP43405 635 aa27.37■■□□□ 1.97
SHD-201ENST00000543264 MYL5Q02045 173 aa27.37■■□□□ 1.97
SHD-201ENST00000543264 CCDC34Q96HJ3 373 aa27.37■■□□□ 1.97
SHD-201ENST00000543264 PALLDQ8WX93 1383 aa27.36■■□□□ 1.97
SHD-201ENST00000543264 VWA3AA6NCI4 1184 aa27.36■■□□□ 1.97
SHD-201ENST00000543264 OAS2P29728 719 aaKnown RBP27.36■■□□□ 1.97
SHD-201ENST00000543264 RABL6Q3YEC7 729 aaPredicted RBP27.36■■□□□ 1.97
SHD-201ENST00000543264 KCNH5Q8NCM2 988 aa27.36■■□□□ 1.97
SHD-201ENST00000543264 SMARCE1Q969G3 411 aa27.36■■□□□ 1.97
SHD-201ENST00000543264 PPP2R2CQ9Y2T4 447 aa27.36■■□□□ 1.97
SHD-201ENST00000543264 KLF18A0A0U1RQI7 1052 aa27.36■■□□□ 1.97
SHD-201ENST00000543264 CPLX1O14810 134 aa27.36■■□□□ 1.97
SHD-201ENST00000543264 LMBR1LQ6UX01 489 aa27.36■■□□□ 1.97
SHD-201ENST00000543264 VSTM4Q8IW00 320 aa27.36■■□□□ 1.97
SHD-201ENST00000543264 CASQ1P31415 396 aa27.35■■□□□ 1.97
SHD-201ENST00000543264 GNG11P61952 73 aa27.35■■□□□ 1.97
SHD-201ENST00000543264 CC2D1AQ6P1N0 951 aaPredicted RBP27.35■■□□□ 1.97
SHD-201ENST00000543264 USP54Q70EL1 1684 aa27.35■■□□□ 1.97
SHD-201ENST00000543264 GOLGA8BA8MQT2 603 aa27.35■■□□□ 1.97
SHD-201ENST00000543264 PNOCQ13519 176 aa27.35■■□□□ 1.97
SHD-201ENST00000543264 ATP8B1O43520 1251 aa27.34■■□□□ 1.97
SHD-201ENST00000543264 SMC1AQ14683 1233 aaKnown RBP27.34■■□□□ 1.97
SHD-201ENST00000543264 TXLNBQ8N3L3 684 aa27.34■■□□□ 1.97
SHD-201ENST00000543264 WDR24Q96S15 920 aa27.34■■□□□ 1.97
SHD-201ENST00000543264 FANCLQ9NW38 375 aa27.34■■□□□ 1.97
SHD-201ENST00000543264 M0R2C6 588 aa27.34■■□□□ 1.97
SHD-201ENST00000543264 DHX16O60231 1041 aaKnown RBP27.34■■□□□ 1.97
SHD-201ENST00000543264 RAD51AP2Q09MP3 1159 aa27.34■■□□□ 1.97
SHD-201ENST00000543264 HSP90AA4PQ58FG1 418 aa27.34■■□□□ 1.97
SHD-201ENST00000543264 TUBE1Q9UJT0 475 aa27.34■■□□□ 1.97
SHD-201ENST00000543264 NFAT5O94916 1531 aa27.33■■□□□ 1.97
SHD-201ENST00000543264 RNF113AO15541 343 aaKnown RBP27.33■■□□□ 1.97
SHD-201ENST00000543264 KIF23Q02241 960 aaPredicted RBP27.33■■□□□ 1.97
SHD-201ENST00000543264 PDILTQ8N807 584 aa27.33■■□□□ 1.97
SHD-201ENST00000543264 ANKRD24Q8TF21 1146 aa27.33■■□□□ 1.97
SHD-201ENST00000543264 MPHOSPH8Q99549 860 aa27.33■■□□□ 1.97
SHD-201ENST00000543264 UBXN6Q9BZV1 441 aa27.33■■□□□ 1.97
SHD-201ENST00000543264 KRBA2Q6ZNG9 492 aa27.33■■□□□ 1.97
SHD-201ENST00000543264 ARHGAP6O43182 974 aa27.32■■□□□ 1.96
SHD-201ENST00000543264 SLC39A14Q15043 492 aa27.32■■□□□ 1.96
SHD-201ENST00000543264 GPR161Q8N6U8 529 aaKnown RBP27.32■■□□□ 1.96
SHD-201ENST00000543264 PRC1O43663 620 aa27.32■■□□□ 1.96
SHD-201ENST00000543264 RBM33Q96EV2 1170 aaKnown RBP27.32■■□□□ 1.96
SHD-201ENST00000543264 HPS5Q9UPZ3 1129 aa27.32■■□□□ 1.96
SHD-201ENST00000543264 IFIT1P09914 478 aaKnown RBP27.31■■□□□ 1.96
SHD-201ENST00000543264 MAP3K9P80192 1104 aa27.31■■□□□ 1.96
SHD-201ENST00000543264 PPP2R3AQ06190 1150 aa27.31■■□□□ 1.96
SHD-201ENST00000543264 OLFM4Q6UX06 510 aa27.31■■□□□ 1.96
SHD-201ENST00000543264 FCHSD1Q86WN1 690 aa27.31■■□□□ 1.96
SHD-201ENST00000543264 TMEM139Q8IV31 216 aa27.31■■□□□ 1.96
SHD-201ENST00000543264 OVOS2A0A0G2JMS6 1433 aa27.31■■□□□ 1.96
SHD-201ENST00000543264 ARFGAP3Q9NP61 516 aa27.31■■□□□ 1.96
SHD-201ENST00000543264 NFATC2IPQ8NCF5 419 aa27.3■■□□□ 1.96
SHD-201ENST00000543264 OSBP2Q969R2 916 aa27.3■■□□□ 1.96
SHD-201ENST00000543264 GPS2Q13227 327 aa27.3■■□□□ 1.96
SHD-201ENST00000543264 BAG1Q99933 345 aaPredicted RBP27.3■■□□□ 1.96
SHD-201ENST00000543264 PARD6BQ9BYG5 372 aa27.3■■□□□ 1.96
SHD-201ENST00000543264 GYS2P54840 703 aa27.29■■□□□ 1.96
SHD-201ENST00000543264 SLC20A2Q08357 652 aa27.29■■□□□ 1.96
SHD-201ENST00000543264 SHC4Q6S5L8 630 aa27.29■■□□□ 1.96
SHD-201ENST00000543264 FBXL16Q8N461 479 aa27.29■■□□□ 1.96
SHD-201ENST00000543264 ATG9AQ7Z3C6 839 aa27.29■■□□□ 1.96
SHD-201ENST00000543264 ZNF496Q96IT1 587 aaPredicted RBP27.29■■□□□ 1.96
SHD-201ENST00000543264 AIFM3Q96NN9 605 aa27.29■■□□□ 1.96
SHD-201ENST00000543264 FEZ2Q9UHY8 353 aaPredicted RBP27.29■■□□□ 1.96
SHD-201ENST00000543264 IMMTQ16891 758 aaKnown RBP27.28■■□□□ 1.96
SHD-201ENST00000543264 CLIC6Q96NY7 704 aa27.28■■□□□ 1.96
SHD-201ENST00000543264 TRIM34Q9BYJ4 488 aa27.28■■□□□ 1.96
SHD-201ENST00000543264 INTS13Q9NVM9 706 aa27.28■■□□□ 1.96
SHD-201ENST00000543264 MRFAP1Q9Y605 127 aa27.28■■□□□ 1.96
SHD-201ENST00000543264 GCP02774 474 aa27.27■■□□□ 1.96
SHD-201ENST00000543264 ESCO1Q5FWF5 840 aa27.27■■□□□ 1.96
SHD-201ENST00000543264 TOGARAM2Q6ZUX3 1019 aa27.27■■□□□ 1.96
SHD-201ENST00000543264 ADKP55263 362 aaKnown RBP27.27■■□□□ 1.96
SHD-201ENST00000543264 FKBP4Q02790 459 aaKnown RBP eCLIP27.27■■□□□ 1.96
SHD-201ENST00000543264 WASHC4Q2M389 1173 aa27.27■■□□□ 1.96
SHD-201ENST00000543264 LMOD2Q6P5Q4 547 aa27.27■■□□□ 1.96
SHD-201ENST00000543264 HPSEQ9Y251 543 aa27.27■■□□□ 1.96
SHD-201ENST00000543264 RSRC2Q7L4I2 434 aaKnown RBP27.26■■□□□ 1.95
SHD-201ENST00000543264 FOXP4Q8IVH2 680 aaPredicted RBP27.26■■□□□ 1.95
SHD-201ENST00000543264 ARHGEF25Q86VW2 580 aa27.26■■□□□ 1.95
SHD-201ENST00000543264 FUT8Q9BYC5 575 aa27.26■■□□□ 1.95
SHD-201ENST00000543264 TSPYL1Q9H0U9 437 aa27.26■■□□□ 1.95
SHD-201ENST00000543264 PDE4BQ07343 736 aa27.25■■□□□ 1.95
SHD-201ENST00000543264 LONRF3Q496Y0 759 aa27.25■■□□□ 1.95
SHD-201ENST00000543264 LRP10Q7Z4F1 713 aa27.25■■□□□ 1.95
SHD-201ENST00000543264 SLC52A2Q9HAB3 445 aa27.25■■□□□ 1.95
SHD-201ENST00000543264 PCDHA5Q9Y5H7 936 aa27.25■■□□□ 1.95
SHD-201ENST00000543264 FGAP02671 866 aa27.25■■□□□ 1.95
SHD-201ENST00000543264 ZSCAN26Q16670 478 aa27.25■■□□□ 1.95
SHD-201ENST00000543264 METTL16Q86W50 562 aaKnown RBP27.25■■□□□ 1.95
SHD-201ENST00000543264 DHX58Q96C10 678 aa27.25■■□□□ 1.95
SHD-201ENST00000543264 ZSWIM4Q9H7M6 989 aa27.25■■□□□ 1.95
SHD-201ENST00000543264 GOLGA6L9A6NEM1 432 aa27.24■■□□□ 1.95
SHD-201ENST00000543264 CASP7P55210 303 aa27.24■■□□□ 1.95
SHD-201ENST00000543264 ANTXR2P58335 489 aa27.24■■□□□ 1.95
SHD-201ENST00000543264 KARSQ15046 597 aaKnown RBP27.24■■□□□ 1.95
SHD-201ENST00000543264 AXIN2Q9Y2T1 843 aa27.24■■□□□ 1.95
SHD-201ENST00000543264 CDC27P30260 824 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms