RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 FAM196AQ6ZSG2 479 aa16.55■□□□□ 0.24
PRAME-214ENST00000543184 DEFB132Q7Z7B7 95 aa16.55■□□□□ 0.24
PRAME-214ENST00000543184 FAM177A1Q8N128 213 aaPredicted RBP16.55■□□□□ 0.24
PRAME-214ENST00000543184 ZNF397Q8NF99 534 aaPredicted RBP16.55■□□□□ 0.24
PRAME-214ENST00000543184 LMOD1P29536 600 aaPredicted RBP16.54■□□□□ 0.24
PRAME-214ENST00000543184 CDC25BP30305 580 aa16.54■□□□□ 0.24
PRAME-214ENST00000543184 TTLL7Q6ZT98 887 aa16.54■□□□□ 0.24
PRAME-214ENST00000543184 AMIGO3Q86WK7 504 aa16.54■□□□□ 0.24
PRAME-214ENST00000543184 KDM3BQ7LBC6 1761 aa16.54■□□□□ 0.24
PRAME-214ENST00000543184 BRWD3Q6RI45 1802 aa16.54■□□□□ 0.24
PRAME-214ENST00000543184 PFKFB2O60825 505 aa16.54■□□□□ 0.24
PRAME-214ENST00000543184 ATP5JP18859 108 aa16.54■□□□□ 0.24
PRAME-214ENST00000543184 FAM160A1Q05DH4 1040 aa16.54■□□□□ 0.24
PRAME-214ENST00000543184 NEXNQ0ZGT2 675 aa16.54■□□□□ 0.24
PRAME-214ENST00000543184 KRT32Q14532 448 aa16.54■□□□□ 0.24
PRAME-214ENST00000543184 ALDH8A1Q9H2A2 487 aaPredicted RBP16.54■□□□□ 0.24
PRAME-214ENST00000543184 LRRC4BQ9NT99 713 aa16.54■□□□□ 0.24
PRAME-214ENST00000543184 ANO10Q9NW15 660 aa16.54■□□□□ 0.24
PRAME-214ENST00000543184 TBC1D2BQ9UPU7 963 aa16.54■□□□□ 0.24
PRAME-214ENST00000543184 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.54■□□□□ 0.24
PRAME-214ENST00000543184 ATP1A3P13637 1013 aa16.53■□□□□ 0.24
PRAME-214ENST00000543184 FDPSP14324 419 aaKnown RBP16.53■□□□□ 0.24
PRAME-214ENST00000543184 TERF2Q15554 542 aa16.53■□□□□ 0.24
PRAME-214ENST00000543184 DHX32Q7L7V1 743 aaKnown RBP16.53■□□□□ 0.24
PRAME-214ENST00000543184 CEP57L1Q8IYX8 460 aa16.53■□□□□ 0.24
PRAME-214ENST00000543184 CCNL1Q9UK58 526 aaPredicted RBP16.53■□□□□ 0.24
PRAME-214ENST00000543184 U3KPZ7 1027 aaPredicted RBP16.53■□□□□ 0.24
PRAME-214ENST00000543184 THSD7AQ9UPZ6 1657 aa16.53■□□□□ 0.24
PRAME-214ENST00000543184 WNK3Q9BYP7 1800 aa16.53■□□□□ 0.24
PRAME-214ENST00000543184 RFX5P48382 616 aaPredicted RBP16.53■□□□□ 0.24
PRAME-214ENST00000543184 SF3A1Q15459 793 aaKnown RBP16.53■□□□□ 0.24
PRAME-214ENST00000543184 KRT222Q8N1A0 295 aa16.53■□□□□ 0.24
PRAME-214ENST00000543184 ZNF594Q96JF6 807 aaPredicted RBP16.53■□□□□ 0.24
PRAME-214ENST00000543184 MARCKSP29966 332 aaPredicted RBP16.52■□□□□ 0.24
PRAME-214ENST00000543184 PPP1R13BQ96KQ4 1090 aa16.52■□□□□ 0.24
PRAME-214ENST00000543184 E7EWF7 191 aa16.52■□□□□ 0.23
PRAME-214ENST00000543184 SLU7O95391 586 aaKnown RBP16.52■□□□□ 0.23
PRAME-214ENST00000543184 PDIA3P30101 505 aaKnown RBP16.52■□□□□ 0.23
PRAME-214ENST00000543184 STK11IPQ8N1F8 1099 aa16.52■□□□□ 0.23
PRAME-214ENST00000543184 ITGB4P16144 1822 aa16.52■□□□□ 0.23
PRAME-214ENST00000543184 A0A087WZG4 1122 aa16.51■□□□□ 0.23
PRAME-214ENST00000543184 EN1Q05925 392 aaPredicted RBP16.51■□□□□ 0.23
PRAME-214ENST00000543184 SYCP1Q15431 976 aa16.51■□□□□ 0.23
PRAME-214ENST00000543184 LMBR1LQ6UX01 489 aa16.51■□□□□ 0.23
PRAME-214ENST00000543184 FMR1NBQ8N0W7 255 aaPredicted RBP16.51■□□□□ 0.23
PRAME-214ENST00000543184 LINC00116Q8NCU8 138 aa16.51■□□□□ 0.23
PRAME-214ENST00000543184 UTYO14607 1347 aa16.51■□□□□ 0.23
PRAME-214ENST00000543184 HOMER1Q86YM7 354 aa16.51■□□□□ 0.23
PRAME-214ENST00000543184 CCDC85AQ96PX6 553 aaPredicted RBP16.51■□□□□ 0.23
PRAME-214ENST00000543184 MRC1P22897 1456 aa16.51■□□□□ 0.23
PRAME-214ENST00000543184 CRKLP46109 303 aaKnown RBP16.5■□□□□ 0.23
PRAME-214ENST00000543184 STK38Q15208 465 aa16.5■□□□□ 0.23
PRAME-214ENST00000543184 ANKRD13DQ6ZTN6 518 aa16.5■□□□□ 0.23
PRAME-214ENST00000543184 DPF2Q92785 391 aa16.5■□□□□ 0.23
PRAME-214ENST00000543184 AIFM3Q96NN9 605 aa16.5■□□□□ 0.23
PRAME-214ENST00000543184 RXRAP19793 462 aa16.5■□□□□ 0.23
PRAME-214ENST00000543184 MRPS27Q92552 414 aaKnown RBP16.5■□□□□ 0.23
PRAME-214ENST00000543184 ERO1AQ96HE7 468 aa16.5■□□□□ 0.23
PRAME-214ENST00000543184 DENND2AQ9ULE3 1009 aa16.5■□□□□ 0.23
PRAME-214ENST00000543184 CYP19A1P11511 503 aaPredicted RBP16.49■□□□□ 0.23
PRAME-214ENST00000543184 HAUS7Q99871 368 aa16.49■□□□□ 0.23
PRAME-214ENST00000543184 METTL22Q9BUU2 404 aaPredicted RBP16.49■□□□□ 0.23
PRAME-214ENST00000543184 KCPQ6ZWJ8 1503 aa16.49■□□□□ 0.23
PRAME-214ENST00000543184 KIF28PB7ZC32 967 aa16.49■□□□□ 0.23
PRAME-214ENST00000543184 CTAGE5O15320 804 aa16.49■□□□□ 0.23
PRAME-214ENST00000543184 HSPD1P10809 573 aaKnown RBP16.49■□□□□ 0.23
PRAME-214ENST00000543184 ZRSR1Q15695 479 aaKnown RBP16.49■□□□□ 0.23
PRAME-214ENST00000543184 NAA16Q6N069 864 aaPredicted RBP16.49■□□□□ 0.23
PRAME-214ENST00000543184 PROM2Q8N271 834 aa16.49■□□□□ 0.23
PRAME-214ENST00000543184 ZNF396Q96N95 335 aaPredicted RBP16.49■□□□□ 0.23
PRAME-214ENST00000543184 DNAI1Q9UI46 699 aa16.49■□□□□ 0.23
PRAME-214ENST00000543184 CARMIL3Q8ND23 1372 aa16.49■□□□□ 0.23
PRAME-214ENST00000543184 FANCGO15287 622 aa16.49■□□□□ 0.23
PRAME-214ENST00000543184 SEC31AO94979 1220 aaKnown RBP16.49■□□□□ 0.23
PRAME-214ENST00000543184 STARD3NLO95772 234 aa16.49■□□□□ 0.23
PRAME-214ENST00000543184 EXOSC10Q01780 885 aaKnown RBP16.49■□□□□ 0.23
PRAME-214ENST00000543184 HDAC5Q9UQL6 1122 aa16.49■□□□□ 0.23
PRAME-214ENST00000543184 LAMA4Q16363 1823 aa16.48■□□□□ 0.23
PRAME-214ENST00000543184 M0R2C6 588 aa16.48■□□□□ 0.23
PRAME-214ENST00000543184 PDIA4P13667 645 aaKnown RBP16.48■□□□□ 0.23
PRAME-214ENST00000543184 GABPB1Q06547 395 aaPredicted RBP16.48■□□□□ 0.23
PRAME-214ENST00000543184 LRRC24Q50LG9 513 aa16.48■□□□□ 0.23
PRAME-214ENST00000543184 ARHGAP29Q52LW3 1261 aa16.48■□□□□ 0.23
PRAME-214ENST00000543184 KBTBD3Q8NAB2 608 aa16.48■□□□□ 0.23
PRAME-214ENST00000543184 COPRSQ9NQ92 184 aa16.48■□□□□ 0.23
PRAME-214ENST00000543184 PAG1Q9NWQ8 432 aa16.48■□□□□ 0.23
PRAME-214ENST00000543184 KIAA1468Q9P260 1216 aa16.48■□□□□ 0.23
PRAME-214ENST00000543184 POLR3GO15318 223 aaPredicted RBP16.48■□□□□ 0.23
PRAME-214ENST00000543184 CLCN6P51797 869 aa16.48■□□□□ 0.23
PRAME-214ENST00000543184 FKBP4Q02790 459 aaKnown RBP eCLIP16.48■□□□□ 0.23
PRAME-214ENST00000543184 NKX2-3Q8TAU0 364 aa16.48■□□□□ 0.23
PRAME-214ENST00000543184 ADAMTS7Q9UKP4 1686 aa16.47■□□□□ 0.23
PRAME-214ENST00000543184 SIPA1L3O60292 1781 aaPredicted RBP16.47■□□□□ 0.23
PRAME-214ENST00000543184 GNPATO15228 680 aa16.47■□□□□ 0.23
PRAME-214ENST00000543184 SFPQP23246 707 aaKnown RBP eCLIP16.47■□□□□ 0.23
PRAME-214ENST00000543184 GPTP24298 496 aa16.47■□□□□ 0.23
PRAME-214ENST00000543184 VGLL3A8MV65 326 aa16.47■□□□□ 0.23
PRAME-214ENST00000543184 NEMFO60524 1076 aa16.47■□□□□ 0.23
PRAME-214ENST00000543184 EZH2Q15910 746 aaKnown RBP16.47■□□□□ 0.23
PRAME-214ENST00000543184 KLHL34Q8N239 644 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms