RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 JDP2Q8WYK2 163 aa12.83□□□□□ -0.36
DDB1-221ENST00000543162 OSBP2Q969R2 916 aa12.83□□□□□ -0.36
DDB1-221ENST00000543162 NSUN4Q96CB9 384 aaKnown RBP12.83□□□□□ -0.36
DDB1-221ENST00000543162 KCNQ5Q9NR82 932 aa12.83□□□□□ -0.36
DDB1-221ENST00000543162 SUGT1Q9Y2Z0 365 aa12.83□□□□□ -0.36
DDB1-221ENST00000543162 CCDC171Q6TFL3 1326 aa12.83□□□□□ -0.36
DDB1-221ENST00000543162 CCDC88AQ3V6T2 1871 aa12.82□□□□□ -0.36
DDB1-221ENST00000543162 MAST2Q6P0Q8 1798 aa12.82□□□□□ -0.36
DDB1-221ENST00000543162 YDJCA8MPS7 323 aa12.82□□□□□ -0.36
DDB1-221ENST00000543162 M0R2C6 588 aa12.82□□□□□ -0.36
DDB1-221ENST00000543162 FKBP1AP62942 108 aaKnown RBP12.82□□□□□ -0.36
DDB1-221ENST00000543162 GSTO1P78417 241 aa12.82□□□□□ -0.36
DDB1-221ENST00000543162 CCDC129Q6ZRS4 1044 aa12.82□□□□□ -0.36
DDB1-221ENST00000543162 ZNF589Q86UQ0 364 aaPredicted RBP12.82□□□□□ -0.36
DDB1-221ENST00000543162 USP26Q9BXU7 913 aa12.82□□□□□ -0.36
DDB1-221ENST00000543162 PUS7LQ9H0K6 701 aaKnown RBP12.82□□□□□ -0.36
DDB1-221ENST00000543162 ZNRF3Q9ULT6 936 aa12.82□□□□□ -0.36
DDB1-221ENST00000543162 SCN9AQ15858 1988 aa12.81□□□□□ -0.36
DDB1-221ENST00000543162 COL4A5P29400 1685 aa12.81□□□□□ -0.36
DDB1-221ENST00000543162 GPAA1O43292 621 aa12.81□□□□□ -0.36
DDB1-221ENST00000543162 LDHCP07864 332 aa12.81□□□□□ -0.36
DDB1-221ENST00000543162 GRIK5Q16478 980 aa12.81□□□□□ -0.36
DDB1-221ENST00000543162 DACT2Q5SW24 774 aa12.81□□□□□ -0.36
DDB1-221ENST00000543162 SLF2Q8IX21 1173 aa12.81□□□□□ -0.36
DDB1-221ENST00000543162 CERS5Q8N5B7 392 aa12.81□□□□□ -0.36
DDB1-221ENST00000543162 ZNF384Q8TF68 577 aa12.81□□□□□ -0.36
DDB1-221ENST00000543162 AIDAQ96BJ3 306 aa12.81□□□□□ -0.36
DDB1-221ENST00000543162 MXD3Q9BW11 206 aa12.81□□□□□ -0.36
DDB1-221ENST00000543162 C22orf23Q9BZE7 217 aa12.81□□□□□ -0.36
DDB1-221ENST00000543162 LSG1Q9H089 658 aaKnown RBP12.81□□□□□ -0.36
DDB1-221ENST00000543162 MAGEB6P1A0A0J9YX57 407 aa12.8□□□□□ -0.36
DDB1-221ENST00000543162 EPB41L2O43491 1005 aaKnown RBP12.8□□□□□ -0.36
DDB1-221ENST00000543162 RAD17O75943 681 aa12.8□□□□□ -0.36
DDB1-221ENST00000543162 MBD4O95243 580 aa12.8□□□□□ -0.36
DDB1-221ENST00000543162 YBX3P16989 372 aaKnown RBP eCLIP12.8□□□□□ -0.364e-9■■■□□ 14.8
DDB1-221ENST00000543162 PTH1RQ03431 593 aa12.8□□□□□ -0.36
DDB1-221ENST00000543162 ADGRA1Q86SQ6 560 aa12.8□□□□□ -0.36
DDB1-221ENST00000543162 MIGA1Q8NAN2 632 aa12.8□□□□□ -0.36
DDB1-221ENST00000543162 TBC1D32Q96NH3 1257 aa12.8□□□□□ -0.36
DDB1-221ENST00000543162 PSME4Q14997 1843 aa12.79□□□□□ -0.36
DDB1-221ENST00000543162 F8W031 263 aaPredicted RBP12.79□□□□□ -0.36
DDB1-221ENST00000543162 LMNB1P20700 586 aa12.79□□□□□ -0.36
DDB1-221ENST00000543162 MCCP23508 829 aa12.79□□□□□ -0.36
DDB1-221ENST00000543162 DIXDC1Q155Q3 683 aa12.79□□□□□ -0.36
DDB1-221ENST00000543162 NOL10Q9BSC4 688 aaKnown RBP12.79□□□□□ -0.36
DDB1-221ENST00000543162 ARMT1Q9H993 441 aa12.79□□□□□ -0.36
DDB1-221ENST00000543162 TTF2Q9UNY4 1162 aaKnown RBP12.79□□□□□ -0.36
DDB1-221ENST00000543162 PSMD14O00487 310 aa12.78□□□□□ -0.36
DDB1-221ENST00000543162 VIL1P09327 827 aaKnown RBP12.78□□□□□ -0.36
DDB1-221ENST00000543162 RBM25P49756 843 aaKnown RBP12.78□□□□□ -0.36
DDB1-221ENST00000543162 PRELPP51888 382 aa12.78□□□□□ -0.36
DDB1-221ENST00000543162 TNIP1Q15025 636 aa12.78□□□□□ -0.36
DDB1-221ENST00000543162 GPR162Q16538 588 aa12.78□□□□□ -0.36
DDB1-221ENST00000543162 RSBN1LQ6PCB5 846 aaPredicted RBP12.78□□□□□ -0.36
DDB1-221ENST00000543162 KIAA0825Q8IV33 1275 aa12.78□□□□□ -0.36
DDB1-221ENST00000543162 LCORLQ8N3X6 602 aa12.78□□□□□ -0.36
DDB1-221ENST00000543162 MAP4K1Q92918 833 aa12.78□□□□□ -0.36
DDB1-221ENST00000543162 STRBPQ96SI9 672 aaKnown RBP12.78□□□□□ -0.36
DDB1-221ENST00000543162 DSCC1Q9BVC3 393 aa12.78□□□□□ -0.36
DDB1-221ENST00000543162 U3KPZ7 1027 aaPredicted RBP12.78□□□□□ -0.36
DDB1-221ENST00000543162 MROH7-TTC4A0A0A0MT08 1334 aa12.78□□□□□ -0.36
DDB1-221ENST00000543162 MYO3BQ8WXR4 1341 aa12.78□□□□□ -0.36
DDB1-221ENST00000543162 ZNF646O15015 1829 aaPredicted RBP12.78□□□□□ -0.36
DDB1-221ENST00000543162 MYH2Q9UKX2 1941 aa12.78□□□□□ -0.36
DDB1-221ENST00000543162 BAG3O95817 575 aa12.77□□□□□ -0.37
DDB1-221ENST00000543162 HSPD1P10809 573 aaKnown RBP12.77□□□□□ -0.37
DDB1-221ENST00000543162 GNAT2P19087 354 aa12.77□□□□□ -0.37
DDB1-221ENST00000543162 EIF6P56537 245 aaKnown RBP12.77□□□□□ -0.37
DDB1-221ENST00000543162 DYNLL1P63167 89 aaKnown RBP12.77□□□□□ -0.37
DDB1-221ENST00000543162 CXCL9Q07325 125 aa12.77□□□□□ -0.37
DDB1-221ENST00000543162 VPS53Q5VIR6 699 aa12.77□□□□□ -0.37
DDB1-221ENST00000543162 CIAPIN1Q6FI81 312 aa12.77□□□□□ -0.37
DDB1-221ENST00000543162 FAM163AQ96GL9 167 aaPredicted RBP12.77□□□□□ -0.37
DDB1-221ENST00000543162 RIOK1Q9BRS2 568 aaKnown RBP12.77□□□□□ -0.37
DDB1-221ENST00000543162 AATFQ9NY61 560 aaKnown RBP eCLIP12.77□□□□□ -0.37
DDB1-221ENST00000543162 RBM8AQ9Y5S9 174 aaKnown RBP12.77□□□□□ -0.37
DDB1-221ENST00000543162 APPP05067 770 aa12.76□□□□□ -0.37
DDB1-221ENST00000543162 HSPA4P34932 840 aa12.76□□□□□ -0.37
DDB1-221ENST00000543162 SCNN1DP51172 638 aa12.76□□□□□ -0.37
DDB1-221ENST00000543162 HDLBPQ00341 1268 aaKnown RBP12.76□□□□□ -0.37
DDB1-221ENST00000543162 HHIPL2Q6UWX4 724 aa12.76□□□□□ -0.37
DDB1-221ENST00000543162 CERS3Q8IU89 383 aa12.76□□□□□ -0.37
DDB1-221ENST00000543162 TEKT1Q969V4 418 aa12.76□□□□□ -0.37
DDB1-221ENST00000543162 CRNKL1Q9BZJ0 848 aaKnown RBP12.76□□□□□ -0.37
DDB1-221ENST00000543162 RBM19Q9Y4C8 960 aaKnown RBP12.76□□□□□ -0.37
DDB1-221ENST00000543162 SLC4A4Q9Y6R1 1079 aa12.76□□□□□ -0.37
DDB1-221ENST00000543162 GAKO14976 1311 aa12.76□□□□□ -0.37
DDB1-221ENST00000543162 GPR75-ASB3A0A0A6YYF3 556 aa12.75□□□□□ -0.37
DDB1-221ENST00000543162 PATL2C9JE40 543 aaKnown RBP12.75□□□□□ -0.37
DDB1-221ENST00000543162 FZD9O00144 591 aa12.75□□□□□ -0.37
DDB1-221ENST00000543162 FOXP2O15409 715 aa12.75□□□□□ -0.37
DDB1-221ENST00000543162 GRIN3BO60391 1043 aa12.75□□□□□ -0.37
DDB1-221ENST00000543162 SBF1O95248 1867 aa12.75□□□□□ -0.37
DDB1-221ENST00000543162 PLCG2P16885 1265 aa12.75□□□□□ -0.37
DDB1-221ENST00000543162 BTDP43251 543 aa12.75□□□□□ -0.37
DDB1-221ENST00000543162 CRKP46108 304 aa12.75□□□□□ -0.37
DDB1-221ENST00000543162 PPP4CP60510 307 aa12.75□□□□□ -0.37
DDB1-221ENST00000543162 NECTIN1Q15223 517 aa12.75□□□□□ -0.37
DDB1-221ENST00000543162 RNF20Q5VTR2 975 aa12.75□□□□□ -0.37
DDB1-221ENST00000543162 AGBL3Q8NEM8 1001 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms