RNA–Protein interactions for RNA: ENST00000543044.2

AP003108.2-208, humanhuman

TSL 3 BASIC

Gene AP003108.2, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003108.2-208ENST00000543044 TBC1D22AQ8WUA7 517 aa11.23□□□□□ -0.61
AP003108.2-208ENST00000543044 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.23□□□□□ -0.61
AP003108.2-208ENST00000543044 TESPA1A2RU30 521 aaPredicted RBP11.22□□□□□ -0.61
AP003108.2-208ENST00000543044 FRAT2O75474 233 aaPredicted RBP11.22□□□□□ -0.61
AP003108.2-208ENST00000543044 GJA5P36382 358 aa11.22□□□□□ -0.61
AP003108.2-208ENST00000543044 TNNI2P48788 182 aa11.22□□□□□ -0.61
AP003108.2-208ENST00000543044 TEPSINQ96N21 525 aa11.22□□□□□ -0.61
AP003108.2-208ENST00000543044 MRIQ9BWK5 157 aa11.22□□□□□ -0.61
AP003108.2-208ENST00000543044 USP44Q9H0E7 712 aa11.22□□□□□ -0.61
AP003108.2-208ENST00000543044 ECM29Q5VYK3 1845 aa11.21□□□□□ -0.61
AP003108.2-208ENST00000543044 KIF16BQ96L93 1317 aa11.21□□□□□ -0.61
AP003108.2-208ENST00000543044 TCP10L2B9ZVM9 353 aa11.21□□□□□ -0.61
AP003108.2-208ENST00000543044 CHAF1AQ13111 956 aaPredicted RBP11.21□□□□□ -0.61
AP003108.2-208ENST00000543044 GRIK5Q16478 980 aa11.21□□□□□ -0.61
AP003108.2-208ENST00000543044 SSH1Q8WYL5 1049 aa11.21□□□□□ -0.61
AP003108.2-208ENST00000543044 TEKT1Q969V4 418 aa11.21□□□□□ -0.61
AP003108.2-208ENST00000543044 OPTNQ96CV9 577 aa11.21□□□□□ -0.61
AP003108.2-208ENST00000543044 TMEM39BQ9GZU3 492 aa11.21□□□□□ -0.61
AP003108.2-208ENST00000543044 ELP3Q9H9T3 547 aa11.21□□□□□ -0.61
AP003108.2-208ENST00000543044 IQSEC3Q9UPP2 1182 aaPredicted RBP11.21□□□□□ -0.61
AP003108.2-208ENST00000543044 SUGT1Q9Y2Z0 365 aa11.21□□□□□ -0.61
AP003108.2-208ENST00000543044 TRIM17Q9Y577 477 aa11.21□□□□□ -0.61
AP003108.2-208ENST00000543044 IFIT1P09914 478 aaKnown RBP11.2□□□□□ -0.62
AP003108.2-208ENST00000543044 FGFR2P21802 821 aa11.2□□□□□ -0.62
AP003108.2-208ENST00000543044 BCAMP50895 628 aa11.2□□□□□ -0.62
AP003108.2-208ENST00000543044 MAP3K9P80192 1104 aa11.2□□□□□ -0.62
AP003108.2-208ENST00000543044 CRHR2Q13324 411 aa11.2□□□□□ -0.62
AP003108.2-208ENST00000543044 PUM3Q15397 648 aaKnown RBP11.2□□□□□ -0.62
AP003108.2-208ENST00000543044 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.2□□□□□ -0.62
AP003108.2-208ENST00000543044 OTOP1Q7RTM1 612 aa11.2□□□□□ -0.62
AP003108.2-208ENST00000543044 CDAN1Q8IWY9 1227 aa11.2□□□□□ -0.62
AP003108.2-208ENST00000543044 KLHDC4Q8TBB5 520 aa11.2□□□□□ -0.62
AP003108.2-208ENST00000543044 ERO1AQ96HE7 468 aa11.2□□□□□ -0.62
AP003108.2-208ENST00000543044 MS4A4AQ96JQ5 239 aa11.2□□□□□ -0.62
AP003108.2-208ENST00000543044 ZDHHC15Q96MV8 337 aa11.2□□□□□ -0.62
AP003108.2-208ENST00000543044 PTPN18Q99952 460 aa11.2□□□□□ -0.62
AP003108.2-208ENST00000543044 HTTP42858 3142 aa11.2□□□□□ -0.62
AP003108.2-208ENST00000543044 PDE4DIPQ5VU43 2346 aa11.19□□□□□ -0.62
AP003108.2-208ENST00000543044 MAST3O60307 1309 aa11.19□□□□□ -0.62
AP003108.2-208ENST00000543044 GTF2A2P52657 109 aa11.19□□□□□ -0.62
AP003108.2-208ENST00000543044 SLFN5Q08AF3 891 aa11.19□□□□□ -0.62
AP003108.2-208ENST00000543044 VGLL4Q14135 290 aa11.19□□□□□ -0.62
AP003108.2-208ENST00000543044 ALDH1L2Q3SY69 923 aa11.19□□□□□ -0.62
AP003108.2-208ENST00000543044 PRPF38BQ5VTL8 546 aaKnown RBP11.19□□□□□ -0.62
AP003108.2-208ENST00000543044 FKBP1CQ5VVH2 108 aa11.19□□□□□ -0.62
AP003108.2-208ENST00000543044 INTS3Q68E01 1043 aaKnown RBP11.19□□□□□ -0.62
AP003108.2-208ENST00000543044 FAM83AQ86UY5 434 aa11.19□□□□□ -0.62
AP003108.2-208ENST00000543044 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.19□□□□□ -0.62
AP003108.2-208ENST00000543044 CSADQ9Y600 493 aa11.19□□□□□ -0.62
AP003108.2-208ENST00000543044 EYA2O00167 538 aa11.18□□□□□ -0.62
AP003108.2-208ENST00000543044 RFX5P48382 616 aaPredicted RBP11.18□□□□□ -0.62
AP003108.2-208ENST00000543044 SP3Q02447 781 aa11.18□□□□□ -0.62
AP003108.2-208ENST00000543044 APOBEC3HQ6NTF7 200 aaKnown RBP11.18□□□□□ -0.62
AP003108.2-208ENST00000543044 HHIPL2Q6UWX4 724 aa11.18□□□□□ -0.62
AP003108.2-208ENST00000543044 LPIN2Q92539 896 aa11.18□□□□□ -0.62
AP003108.2-208ENST00000543044 HOOK2Q96ED9 719 aa11.18□□□□□ -0.62
AP003108.2-208ENST00000543044 TMOD2Q9NZR1 351 aa11.18□□□□□ -0.62
AP003108.2-208ENST00000543044 PTPN22Q9Y2R2 807 aa11.18□□□□□ -0.62
AP003108.2-208ENST00000543044 LAMB1P07942 1786 aa11.18□□□□□ -0.62
AP003108.2-208ENST00000543044 CENPFP49454 3210 aa11.18□□□□□ -0.62
AP003108.2-208ENST00000543044 CCL15-CCL14A0A0B4J2E2 113 aa11.17□□□□□ -0.62
AP003108.2-208ENST00000543044 SLC5A1P13866 664 aa11.17□□□□□ -0.62
AP003108.2-208ENST00000543044 CACNB3P54284 484 aa11.17□□□□□ -0.62
AP003108.2-208ENST00000543044 CCL15Q16663 113 aa11.17□□□□□ -0.62
AP003108.2-208ENST00000543044 WDR66Q8TBY9 1149 aa11.17□□□□□ -0.62
AP003108.2-208ENST00000543044 CD99L2Q8TCZ2 262 aa11.17□□□□□ -0.62
AP003108.2-208ENST00000543044 CNKSR2Q8WXI2 1034 aa11.17□□□□□ -0.62
AP003108.2-208ENST00000543044 BRI3BPQ8WY22 251 aa11.17□□□□□ -0.62
AP003108.2-208ENST00000543044 EFCC1Q9HA90 598 aa11.17□□□□□ -0.62
AP003108.2-208ENST00000543044 ZFYVE28Q9HCC9 887 aa11.17□□□□□ -0.62
AP003108.2-208ENST00000543044 FBXO3Q9UK99 471 aa11.17□□□□□ -0.62
AP003108.2-208ENST00000543044 ARAP2Q8WZ64 1704 aa11.17□□□□□ -0.62
AP003108.2-208ENST00000543044 SPDYE5A6NIY4 337 aa11.16□□□□□ -0.62
AP003108.2-208ENST00000543044 CT47B1P0C2W7 299 aaPredicted RBP11.16□□□□□ -0.62
AP003108.2-208ENST00000543044 ARHGEF6Q15052 776 aa11.16□□□□□ -0.62
AP003108.2-208ENST00000543044 ATG9AQ7Z3C6 839 aa11.16□□□□□ -0.62
AP003108.2-208ENST00000543044 ERO1BQ86YB8 467 aa11.16□□□□□ -0.62
AP003108.2-208ENST00000543044 OTUD5Q96G74 571 aa11.16□□□□□ -0.62
AP003108.2-208ENST00000543044 WRNIP1Q96S55 665 aa11.16□□□□□ -0.62
AP003108.2-208ENST00000543044 SMC4Q9NTJ3 1288 aa11.16□□□□□ -0.62
AP003108.2-208ENST00000543044 MKI67P46013 3256 aaKnown RBP11.16□□□□□ -0.62
AP003108.2-208ENST00000543044 WDHD1O75717 1129 aaPredicted RBP11.15□□□□□ -0.62
AP003108.2-208ENST00000543044 CIAO1O76071 339 aa11.15□□□□□ -0.62
AP003108.2-208ENST00000543044 UBTFL1P0CB47 393 aaPredicted RBP11.15□□□□□ -0.62
AP003108.2-208ENST00000543044 CETPP11597 493 aa11.15□□□□□ -0.62
AP003108.2-208ENST00000543044 TAF1CQ15572 869 aaPredicted RBP11.15□□□□□ -0.62
AP003108.2-208ENST00000543044 DCAF15Q66K64 600 aa11.15□□□□□ -0.62
AP003108.2-208ENST00000543044 TRMT2AQ8IZ69 625 aaKnown RBP11.15□□□□□ -0.62
AP003108.2-208ENST00000543044 FAM43AQ8N2R8 423 aa11.15□□□□□ -0.62
AP003108.2-208ENST00000543044 ARMC5Q96C12 935 aa11.15□□□□□ -0.62
AP003108.2-208ENST00000543044 CDCA7LQ96GN5 454 aa11.15□□□□□ -0.62
AP003108.2-208ENST00000543044 ZCCHC17Q9NP64 241 aaKnown RBP11.15□□□□□ -0.62
AP003108.2-208ENST00000543044 HDAC5Q9UQL6 1122 aa11.15□□□□□ -0.62
AP003108.2-208ENST00000543044 SNCAIPQ9Y6H5 919 aa11.15□□□□□ -0.62
AP003108.2-208ENST00000543044 BRCA2P51587 3418 aa11.15□□□□□ -0.62
AP003108.2-208ENST00000543044 RPAP1Q9BWH6 1393 aaPredicted RBP11.15□□□□□ -0.63
AP003108.2-208ENST00000543044 POTEFA5A3E0 1075 aa11.14□□□□□ -0.63
AP003108.2-208ENST00000543044 CAP1Q01518 475 aa11.14□□□□□ -0.63
AP003108.2-208ENST00000543044 PPIL2Q13356 520 aa11.14□□□□□ -0.63
AP003108.2-208ENST00000543044 SNAPC2Q13487 334 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms