RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 MAGEB6Q8N7X4 407 aa14.78□□□□□ -0.04
TNC-212ENST00000542877 IMPACTQ9P2X3 320 aa14.78□□□□□ -0.04
TNC-212ENST00000542877 FAM13AO94988 1023 aa14.77□□□□□ -0.04
TNC-212ENST00000542877 RGS22Q8NE09 1264 aa14.77□□□□□ -0.04
TNC-212ENST00000542877 CCDC114Q96M63 670 aa14.77□□□□□ -0.04
TNC-212ENST00000542877 SAMD15Q9P1V8 674 aa14.77□□□□□ -0.04
TNC-212ENST00000542877 PLCG2P16885 1265 aa14.77□□□□□ -0.04
TNC-212ENST00000542877 ZBTB16Q05516 673 aa14.77□□□□□ -0.04
TNC-212ENST00000542877 LRRC45Q96CN5 670 aa14.77□□□□□ -0.04
TNC-212ENST00000542877 NAPGQ99747 312 aaPredicted RBP14.77□□□□□ -0.04
TNC-212ENST00000542877 BICC1Q9H694 974 aaKnown RBP14.77□□□□□ -0.04
TNC-212ENST00000542877 RRAGDQ9NQL2 400 aaPredicted RBP14.77□□□□□ -0.04
TNC-212ENST00000542877 ZNF75DP51815 510 aa14.77□□□□□ -0.05
TNC-212ENST00000542877 ANO1Q5XXA6 986 aa14.77□□□□□ -0.05
TNC-212ENST00000542877 ZNF804AQ7Z570 1209 aa14.77□□□□□ -0.05
TNC-212ENST00000542877 IGSF22Q8N9C0 903 aa14.77□□□□□ -0.05
TNC-212ENST00000542877 NAP1L4Q99733 375 aaKnown RBP14.77□□□□□ -0.05
TNC-212ENST00000542877 RAPGEF6Q8TEU7 1601 aa14.77□□□□□ -0.05
TNC-212ENST00000542877 SPDYE3A6NKU9 549 aa14.77□□□□□ -0.05
TNC-212ENST00000542877 SLC27A2O14975 620 aa14.77□□□□□ -0.05
TNC-212ENST00000542877 PLCD1P51178 756 aa14.77□□□□□ -0.05
TNC-212ENST00000542877 GTF3C6Q969F1 213 aa14.77□□□□□ -0.05
TNC-212ENST00000542877 TMEM87BQ96K49 555 aa14.77□□□□□ -0.05
TNC-212ENST00000542877 PPP1R9BQ96SB3 815 aa14.77□□□□□ -0.05
TNC-212ENST00000542877 BABAM1Q9NWV8 329 aa14.77□□□□□ -0.05
TNC-212ENST00000542877 PLCH2O75038 1416 aa14.77□□□□□ -0.05
TNC-212ENST00000542877 NPC1L1Q9UHC9 1359 aa14.77□□□□□ -0.05
TNC-212ENST00000542877 RPL13P26373 211 aaKnown RBP14.76□□□□□ -0.05
TNC-212ENST00000542877 MYRIPQ8NFW9 859 aa14.76□□□□□ -0.05
TNC-212ENST00000542877 SETDB2Q96T68 719 aa14.76□□□□□ -0.05
TNC-212ENST00000542877 MTUS1Q9ULD2 1270 aa14.76□□□□□ -0.05
TNC-212ENST00000542877 SNX14Q9Y5W7 946 aa14.76□□□□□ -0.05
TNC-212ENST00000542877 TNNI2P48788 182 aa14.76□□□□□ -0.05
TNC-212ENST00000542877 CPA1P15085 419 aa14.76□□□□□ -0.05
TNC-212ENST00000542877 CEP57Q86XR8 500 aa14.76□□□□□ -0.05
TNC-212ENST00000542877 ZMYM4Q5VZL5 1548 aa14.76□□□□□ -0.05
TNC-212ENST00000542877 U2AF2P26368 475 aaKnown RBP eCLIP14.76□□□□□ -0.05
TNC-212ENST00000542877 CALCOCO2Q13137 446 aa14.76□□□□□ -0.05
TNC-212ENST00000542877 CCDC26Q8TAB7 109 aa14.76□□□□□ -0.05
TNC-212ENST00000542877 RASSF4Q9H2L5 321 aa14.76□□□□□ -0.05
TNC-212ENST00000542877 MCM9Q9NXL9 1143 aa14.76□□□□□ -0.05
TNC-212ENST00000542877 A6NNZ2 444 aa14.76□□□□□ -0.05
TNC-212ENST00000542877 RIOK3O14730 519 aaKnown RBP14.76□□□□□ -0.05
TNC-212ENST00000542877 EEF2P13639 858 aaKnown RBP14.76□□□□□ -0.05
TNC-212ENST00000542877 TUBB8Q3ZCM7 444 aa14.76□□□□□ -0.05
TNC-212ENST00000542877 CYP26C1Q6V0L0 522 aa14.76□□□□□ -0.05
TNC-212ENST00000542877 ZNF219Q9P2Y4 722 aaPredicted RBP14.76□□□□□ -0.05
TNC-212ENST00000542877 JAKMIP2Q96AA8 810 aa14.75□□□□□ -0.05
TNC-212ENST00000542877 ZRANB1Q9UGI0 708 aa14.75□□□□□ -0.05
TNC-212ENST00000542877 KCNH3Q9ULD8 1083 aa14.75□□□□□ -0.05
TNC-212ENST00000542877 ABCC1P33527 1531 aa14.75□□□□□ -0.05
TNC-212ENST00000542877 TCOF1Q13428 1488 aaKnown RBP14.75□□□□□ -0.05
TNC-212ENST00000542877 TMEM110-MUSTN1A8MSY1 372 aa14.75□□□□□ -0.05
TNC-212ENST00000542877 DEXIO95424 95 aa14.75□□□□□ -0.05
TNC-212ENST00000542877 SV2BQ7L1I2 683 aa14.75□□□□□ -0.05
TNC-212ENST00000542877 ATP6V0A2Q9Y487 856 aa14.75□□□□□ -0.05
TNC-212ENST00000542877 UHRF1BP1LA0JNW5 1464 aa14.75□□□□□ -0.05
TNC-212ENST00000542877 VWA3AA6NCI4 1184 aa14.75□□□□□ -0.05
TNC-212ENST00000542877 FANCCQ00597 558 aa14.75□□□□□ -0.05
TNC-212ENST00000542877 VWA3BQ502W6 1294 aa14.75□□□□□ -0.05
TNC-212ENST00000542877 AFAP1L1Q8TED9 768 aa14.75□□□□□ -0.05
TNC-212ENST00000542877 NIP7Q9Y221 180 aaKnown RBP eCLIP14.75□□□□□ -0.05
TNC-212ENST00000542877 TLDC2A0PJX2 215 aa14.75□□□□□ -0.05
TNC-212ENST00000542877 RXRAP19793 462 aa14.75□□□□□ -0.05
TNC-212ENST00000542877 SETDB1Q15047 1291 aa14.75□□□□□ -0.05
TNC-212ENST00000542877 DNAJC21Q5F1R6 531 aaKnown RBP14.75□□□□□ -0.05
TNC-212ENST00000542877 CCDC50Q8IVM0 306 aa14.75□□□□□ -0.05
TNC-212ENST00000542877 CBX8Q9HC52 389 aa14.75□□□□□ -0.05
TNC-212ENST00000542877 DDX21Q9NR30 783 aaKnown RBP eCLIP14.75□□□□□ -0.05
TNC-212ENST00000542877 SGSM2O43147 1006 aa14.74□□□□□ -0.05
TNC-212ENST00000542877 PLCB3Q01970 1234 aa14.74□□□□□ -0.05
TNC-212ENST00000542877 B4GALNT4Q76KP1 1039 aa14.74□□□□□ -0.05
TNC-212ENST00000542877 EYA1Q99502 592 aa14.74□□□□□ -0.05
TNC-212ENST00000542877 NOC4LQ9BVI4 516 aaKnown RBP14.74□□□□□ -0.05
TNC-212ENST00000542877 A0A1W2PP64 1363 aa14.74□□□□□ -0.05
TNC-212ENST00000542877 IRS4O14654 1257 aaPredicted RBP14.74□□□□□ -0.05
TNC-212ENST00000542877 CUTAO60888 179 aa14.74□□□□□ -0.05
TNC-212ENST00000542877 ATP2A2P16615 1042 aaKnown RBP14.74□□□□□ -0.05
TNC-212ENST00000542877 TBC1D8BQ0IIM8 1120 aa14.74□□□□□ -0.05
TNC-212ENST00000542877 CCDC65Q8IXS2 484 aa14.74□□□□□ -0.05
TNC-212ENST00000542877 MIGA1Q8NAN2 632 aa14.74□□□□□ -0.05
TNC-212ENST00000542877 MLKLQ8NB16 471 aa14.74□□□□□ -0.05
TNC-212ENST00000542877 NFATC2IPQ8NCF5 419 aa14.74□□□□□ -0.05
TNC-212ENST00000542877 NGLY1Q96IV0 654 aa14.74□□□□□ -0.05
TNC-212ENST00000542877 NAP1L3Q99457 506 aaPredicted RBP14.74□□□□□ -0.05
TNC-212ENST00000542877 COL17A1Q9UMD9 1497 aaPredicted RBP14.74□□□□□ -0.05
TNC-212ENST00000542877 INSRP06213 1382 aa14.74□□□□□ -0.05
TNC-212ENST00000542877 ATP6V1AP38606 617 aa14.74□□□□□ -0.05
TNC-212ENST00000542877 GABPB1Q06547 395 aaPredicted RBP14.74□□□□□ -0.05
TNC-212ENST00000542877 CTNND2Q9UQB3 1225 aa14.74□□□□□ -0.05
TNC-212ENST00000542877 CCT6AP40227 531 aaKnown RBP14.74□□□□□ -0.05
TNC-212ENST00000542877 C10orf67Q8IYJ2 551 aa14.74□□□□□ -0.05
TNC-212ENST00000542877 NYXQ9GZU5 481 aa14.74□□□□□ -0.05
TNC-212ENST00000542877 DMRT2Q9Y5R5 561 aa14.74□□□□□ -0.05
TNC-212ENST00000542877 RIMS2Q9UQ26 1411 aa14.74□□□□□ -0.05
TNC-212ENST00000542877 A2MP01023 1474 aa14.74□□□□□ -0.05
TNC-212ENST00000542877 TTLL12Q14166 644 aaPredicted RBP14.73□□□□□ -0.05
TNC-212ENST00000542877 PPP1R7Q15435 360 aa14.73□□□□□ -0.05
TNC-212ENST00000542877 PABPN1LA6NDY0 278 aaKnown RBP14.73□□□□□ -0.05
TNC-212ENST00000542877 IGSF3O75054 1194 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms