RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 IGF2BP3O00425 579 aaKnown RBP eCLIP21.85■■□□□ 1.09
PPP1CA-210ENST00000542876 PDE8BO95263 885 aa21.85■■□□□ 1.09
PPP1CA-210ENST00000542876 ANKRD44Q8N8A2 993 aa21.85■■□□□ 1.09
PPP1CA-210ENST00000542876 SSH1Q8WYL5 1049 aa21.84■■□□□ 1.09
PPP1CA-210ENST00000542876 ELP3Q9H9T3 547 aa21.84■■□□□ 1.09
PPP1CA-210ENST00000542876 ECM29Q5VYK3 1845 aa21.84■■□□□ 1.09
PPP1CA-210ENST00000542876 SLC34A2O95436 690 aa21.83■■□□□ 1.09
PPP1CA-210ENST00000542876 HDLBPQ00341 1268 aaKnown RBP21.83■■□□□ 1.09
PPP1CA-210ENST00000542876 TEKT1Q969V4 418 aa21.83■■□□□ 1.09
PPP1CA-210ENST00000542876 TRIM17Q9Y577 477 aa21.83■■□□□ 1.09
PPP1CA-210ENST00000542876 IFIT1P09914 478 aaKnown RBP21.82■■□□□ 1.08
PPP1CA-210ENST00000542876 OPTNQ96CV9 577 aa21.82■■□□□ 1.08
PPP1CA-210ENST00000542876 ERO1AQ96HE7 468 aa21.82■■□□□ 1.08
PPP1CA-210ENST00000542876 TMEM39BQ9GZU3 492 aa21.82■■□□□ 1.08
PPP1CA-210ENST00000542876 USP44Q9H0E7 712 aa21.82■■□□□ 1.08
PPP1CA-210ENST00000542876 TMOD2Q9NZR1 351 aa21.82■■□□□ 1.08
PPP1CA-210ENST00000542876 CSADQ9Y600 493 aa21.82■■□□□ 1.08
PPP1CA-210ENST00000542876 GJA5P36382 358 aa21.81■■□□□ 1.08
PPP1CA-210ENST00000542876 BCAMP50895 628 aa21.81■■□□□ 1.08
PPP1CA-210ENST00000542876 PUM3Q15397 648 aaKnown RBP21.81■■□□□ 1.08
PPP1CA-210ENST00000542876 VGLL2Q8N8G2 317 aa21.81■■□□□ 1.08
PPP1CA-210ENST00000542876 KLHDC4Q8TBB5 520 aa21.81■■□□□ 1.08
PPP1CA-210ENST00000542876 TEPSINQ96N21 525 aa21.81■■□□□ 1.08
PPP1CA-210ENST00000542876 PDE4DIPQ5VU43 2346 aa21.81■■□□□ 1.08
PPP1CA-210ENST00000542876 MAST3O60307 1309 aa21.8■■□□□ 1.08
PPP1CA-210ENST00000542876 MAP3K9P80192 1104 aa21.8■■□□□ 1.08
PPP1CA-210ENST00000542876 CRHR2Q13324 411 aa21.8■■□□□ 1.08
PPP1CA-210ENST00000542876 GRIK5Q16478 980 aa21.8■■□□□ 1.08
PPP1CA-210ENST00000542876 SUGT1Q9Y2Z0 365 aa21.8■■□□□ 1.08
PPP1CA-210ENST00000542876 KIF16BQ96L93 1317 aa21.8■■□□□ 1.08
PPP1CA-210ENST00000542876 TESPA1A2RU30 521 aaPredicted RBP21.79■■□□□ 1.08
PPP1CA-210ENST00000542876 SLFN5Q08AF3 891 aa21.79■■□□□ 1.08
PPP1CA-210ENST00000542876 ALDH1L2Q3SY69 923 aa21.79■■□□□ 1.08
PPP1CA-210ENST00000542876 OTOP1Q7RTM1 612 aa21.79■■□□□ 1.08
PPP1CA-210ENST00000542876 HOOK2Q96ED9 719 aa21.79■■□□□ 1.08
PPP1CA-210ENST00000542876 MRIQ9BWK5 157 aa21.79■■□□□ 1.08
PPP1CA-210ENST00000542876 SMC4Q9NTJ3 1288 aa21.79■■□□□ 1.08
PPP1CA-210ENST00000542876 SLC5A1P13866 664 aa21.78■■□□□ 1.08
PPP1CA-210ENST00000542876 GTF2A2P52657 109 aa21.78■■□□□ 1.08
PPP1CA-210ENST00000542876 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.78■■□□□ 1.08
PPP1CA-210ENST00000542876 CDAN1Q8IWY9 1227 aa21.78■■□□□ 1.08
PPP1CA-210ENST00000542876 ZDHHC15Q96MV8 337 aa21.78■■□□□ 1.08
PPP1CA-210ENST00000542876 EYA2O00167 538 aa21.77■■□□□ 1.08
PPP1CA-210ENST00000542876 CACNB3P54284 484 aa21.77■■□□□ 1.08
PPP1CA-210ENST00000542876 VGLL4Q14135 290 aa21.77■■□□□ 1.08
PPP1CA-210ENST00000542876 LPIN2Q92539 896 aa21.77■■□□□ 1.08
PPP1CA-210ENST00000542876 PTPN18Q99952 460 aa21.77■■□□□ 1.08
PPP1CA-210ENST00000542876 CCL15-CCL14A0A0B4J2E2 113 aa21.76■■□□□ 1.07
PPP1CA-210ENST00000542876 WDHD1O75717 1129 aaPredicted RBP21.76■■□□□ 1.07
PPP1CA-210ENST00000542876 FGFR2P21802 821 aa21.76■■□□□ 1.07
PPP1CA-210ENST00000542876 SP3Q02447 781 aa21.76■■□□□ 1.07
PPP1CA-210ENST00000542876 CCL15Q16663 113 aa21.76■■□□□ 1.07
PPP1CA-210ENST00000542876 INTS3Q68E01 1043 aaKnown RBP21.76■■□□□ 1.07
PPP1CA-210ENST00000542876 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.76■■□□□ 1.07
PPP1CA-210ENST00000542876 WDR66Q8TBY9 1149 aa21.76■■□□□ 1.07
PPP1CA-210ENST00000542876 CD99L2Q8TCZ2 262 aa21.76■■□□□ 1.07
PPP1CA-210ENST00000542876 OTUD5Q96G74 571 aa21.76■■□□□ 1.07
PPP1CA-210ENST00000542876 MS4A4AQ96JQ5 239 aa21.76■■□□□ 1.07
PPP1CA-210ENST00000542876 EFCC1Q9HA90 598 aa21.76■■□□□ 1.07
PPP1CA-210ENST00000542876 TNRC18O15417 2968 aaPredicted RBP21.76■■□□□ 1.07
PPP1CA-210ENST00000542876 UBTFL1P0CB47 393 aaPredicted RBP21.75■■□□□ 1.07
PPP1CA-210ENST00000542876 ARHGEF6Q15052 776 aa21.75■■□□□ 1.07
PPP1CA-210ENST00000542876 PRPF38BQ5VTL8 546 aaKnown RBP21.75■■□□□ 1.07
PPP1CA-210ENST00000542876 FKBP1CQ5VVH2 108 aa21.75■■□□□ 1.07
PPP1CA-210ENST00000542876 HHIPL2Q6UWX4 724 aa21.75■■□□□ 1.07
PPP1CA-210ENST00000542876 FAM83AQ86UY5 434 aa21.75■■□□□ 1.07
PPP1CA-210ENST00000542876 ZFYVE28Q9HCC9 887 aa21.75■■□□□ 1.07
PPP1CA-210ENST00000542876 ARAP2Q8WZ64 1704 aa21.75■■□□□ 1.07
PPP1CA-210ENST00000542876 TAF1CQ15572 869 aaPredicted RBP21.74■■□□□ 1.07
PPP1CA-210ENST00000542876 APOBEC3HQ6NTF7 200 aaKnown RBP21.74■■□□□ 1.07
PPP1CA-210ENST00000542876 CNKSR2Q8WXI2 1034 aa21.74■■□□□ 1.07
PPP1CA-210ENST00000542876 BRI3BPQ8WY22 251 aa21.74■■□□□ 1.07
PPP1CA-210ENST00000542876 WRNIP1Q96S55 665 aa21.74■■□□□ 1.07
PPP1CA-210ENST00000542876 HDAC5Q9UQL6 1122 aa21.74■■□□□ 1.07
PPP1CA-210ENST00000542876 PTPN22Q9Y2R2 807 aa21.74■■□□□ 1.07
PPP1CA-210ENST00000542876 RFX5P48382 616 aaPredicted RBP21.73■■□□□ 1.07
PPP1CA-210ENST00000542876 DCAF15Q66K64 600 aa21.73■■□□□ 1.07
PPP1CA-210ENST00000542876 GNL3LQ9NVN8 582 aaKnown RBP21.73■■□□□ 1.07
PPP1CA-210ENST00000542876 SPDYE5A6NIY4 337 aa21.72■■□□□ 1.07
PPP1CA-210ENST00000542876 ERO1BQ86YB8 467 aa21.72■■□□□ 1.07
PPP1CA-210ENST00000542876 CDCA7LQ96GN5 454 aa21.72■■□□□ 1.07
PPP1CA-210ENST00000542876 SIL1Q9H173 461 aa21.72■■□□□ 1.07
PPP1CA-210ENST00000542876 CEP126Q9P2H0 1117 aa21.72■■□□□ 1.07
PPP1CA-210ENST00000542876 FBXO3Q9UK99 471 aa21.72■■□□□ 1.07
PPP1CA-210ENST00000542876 CT47B1P0C2W7 299 aaPredicted RBP21.71■■□□□ 1.07
PPP1CA-210ENST00000542876 CETPP11597 493 aa21.71■■□□□ 1.07
PPP1CA-210ENST00000542876 CIAO1O76071 339 aa21.7■■□□□ 1.06
PPP1CA-210ENST00000542876 ATP2B3Q16720 1220 aa21.7■■□□□ 1.06
PPP1CA-210ENST00000542876 ATG9AQ7Z3C6 839 aa21.7■■□□□ 1.06
PPP1CA-210ENST00000542876 ZNF341Q9BYN7 854 aa21.7■■□□□ 1.06
PPP1CA-210ENST00000542876 API5Q9BZZ5 524 aaKnown RBP21.7■■□□□ 1.06
PPP1CA-210ENST00000542876 SNAPC2Q13487 334 aa21.69■■□□□ 1.06
PPP1CA-210ENST00000542876 FAM43AQ8N2R8 423 aa21.69■■□□□ 1.06
PPP1CA-210ENST00000542876 ZKSCAN4Q969J2 545 aaPredicted RBP21.69■■□□□ 1.06
PPP1CA-210ENST00000542876 NOB1Q9ULX3 412 aaKnown RBP21.69■■□□□ 1.06
PPP1CA-210ENST00000542876 SNCAIPQ9Y6H5 919 aa21.69■■□□□ 1.06
PPP1CA-210ENST00000542876 RPAP1Q9BWH6 1393 aaPredicted RBP21.69■■□□□ 1.06
PPP1CA-210ENST00000542876 LAMB1P07942 1786 aa21.69■■□□□ 1.06
PPP1CA-210ENST00000542876 FAM151AQ8WW52 585 aa21.68■■□□□ 1.06
PPP1CA-210ENST00000542876 OTOFQ9HC10 1997 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms