RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 HDLBPQ00341 1268 aaKnown RBP14.91□□□□□ -0.02
PTPN6-219ENST00000542848 CAVIN4Q5BKX8 364 aa14.91□□□□□ -0.02
PTPN6-219ENST00000542848 ANKRD44Q8N8A2 993 aa14.91□□□□□ -0.02
PTPN6-219ENST00000542848 TBC1D22AQ8WUA7 517 aa14.91□□□□□ -0.02
PTPN6-219ENST00000542848 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.91□□□□□ -0.02
PTPN6-219ENST00000542848 CENPFP49454 3210 aa14.9□□□□□ -0.02
PTPN6-219ENST00000542848 TESPA1A2RU30 521 aaPredicted RBP14.9□□□□□ -0.02
PTPN6-219ENST00000542848 E9PSI1 815 aa14.9□□□□□ -0.02
PTPN6-219ENST00000542848 TNNI2P48788 182 aa14.9□□□□□ -0.02
PTPN6-219ENST00000542848 LRRC24Q50LG9 513 aa14.9□□□□□ -0.02
PTPN6-219ENST00000542848 METTL24Q5JXM2 366 aa14.9□□□□□ -0.02
PTPN6-219ENST00000542848 VGLL2Q8N8G2 317 aa14.9□□□□□ -0.02
PTPN6-219ENST00000542848 TEPSINQ96N21 525 aa14.9□□□□□ -0.02
PTPN6-219ENST00000542848 MRIQ9BWK5 157 aa14.9□□□□□ -0.02
PTPN6-219ENST00000542848 USP44Q9H0E7 712 aa14.9□□□□□ -0.02
PTPN6-219ENST00000542848 KIAA0100Q14667 2235 aaKnown RBP14.9□□□□□ -0.02
PTPN6-219ENST00000542848 RBBP6Q7Z6E9 1792 aaKnown RBP14.9□□□□□ -0.02
PTPN6-219ENST00000542848 FRAT2O75474 233 aaPredicted RBP14.89□□□□□ -0.03
PTPN6-219ENST00000542848 GJA5P36382 358 aa14.89□□□□□ -0.03
PTPN6-219ENST00000542848 SSH1Q8WYL5 1049 aa14.89□□□□□ -0.03
PTPN6-219ENST00000542848 HTTP42858 3142 aa14.89□□□□□ -0.03
PTPN6-219ENST00000542848 TCP10L2B9ZVM9 353 aa14.88□□□□□ -0.03
PTPN6-219ENST00000542848 ERO1AQ96HE7 468 aa14.88□□□□□ -0.03
PTPN6-219ENST00000542848 IQSEC3Q9UPP2 1182 aaPredicted RBP14.88□□□□□ -0.03
PTPN6-219ENST00000542848 SUGT1Q9Y2Z0 365 aa14.88□□□□□ -0.03
PTPN6-219ENST00000542848 KIF16BQ96L93 1317 aa14.88□□□□□ -0.03
PTPN6-219ENST00000542848 MAP3K9P80192 1104 aa14.87□□□□□ -0.03
PTPN6-219ENST00000542848 SLFN5Q08AF3 891 aa14.87□□□□□ -0.03
PTPN6-219ENST00000542848 CHAF1AQ13111 956 aaPredicted RBP14.87□□□□□ -0.03
PTPN6-219ENST00000542848 GRIK5Q16478 980 aa14.87□□□□□ -0.03
PTPN6-219ENST00000542848 ALDH1L2Q3SY69 923 aa14.87□□□□□ -0.03
PTPN6-219ENST00000542848 DIEXFQ68CQ4 756 aaKnown RBP14.87□□□□□ -0.03
PTPN6-219ENST00000542848 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.87□□□□□ -0.03
PTPN6-219ENST00000542848 TEKT1Q969V4 418 aa14.87□□□□□ -0.03
PTPN6-219ENST00000542848 OPTNQ96CV9 577 aa14.87□□□□□ -0.03
PTPN6-219ENST00000542848 MS4A4AQ96JQ5 239 aa14.87□□□□□ -0.03
PTPN6-219ENST00000542848 PTPN18Q99952 460 aa14.87□□□□□ -0.03
PTPN6-219ENST00000542848 TMEM39BQ9GZU3 492 aa14.87□□□□□ -0.03
PTPN6-219ENST00000542848 ELP3Q9H9T3 547 aa14.87□□□□□ -0.03
PTPN6-219ENST00000542848 TRIM17Q9Y577 477 aa14.87□□□□□ -0.03
PTPN6-219ENST00000542848 IFIT1P09914 478 aaKnown RBP14.86□□□□□ -0.03
PTPN6-219ENST00000542848 FGFR2P21802 821 aa14.86□□□□□ -0.03
PTPN6-219ENST00000542848 BCAMP50895 628 aa14.86□□□□□ -0.03
PTPN6-219ENST00000542848 CRHR2Q13324 411 aa14.86□□□□□ -0.03
PTPN6-219ENST00000542848 PUM3Q15397 648 aaKnown RBP14.86□□□□□ -0.03
PTPN6-219ENST00000542848 FKBP1CQ5VVH2 108 aa14.86□□□□□ -0.03
PTPN6-219ENST00000542848 INTS3Q68E01 1043 aaKnown RBP14.86□□□□□ -0.03
PTPN6-219ENST00000542848 OTOP1Q7RTM1 612 aa14.86□□□□□ -0.03
PTPN6-219ENST00000542848 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.86□□□□□ -0.03
PTPN6-219ENST00000542848 KLHDC4Q8TBB5 520 aa14.86□□□□□ -0.03
PTPN6-219ENST00000542848 ZDHHC15Q96MV8 337 aa14.86□□□□□ -0.03
PTPN6-219ENST00000542848 MAST3O60307 1309 aa14.86□□□□□ -0.03
PTPN6-219ENST00000542848 MYH2Q9UKX2 1941 aa14.86□□□□□ -0.03
PTPN6-219ENST00000542848 GTF2A2P52657 109 aa14.85□□□□□ -0.03
PTPN6-219ENST00000542848 HHIPL2Q6UWX4 724 aa14.85□□□□□ -0.03
PTPN6-219ENST00000542848 FAM83AQ86UY5 434 aa14.85□□□□□ -0.03
PTPN6-219ENST00000542848 CDAN1Q8IWY9 1227 aa14.85□□□□□ -0.03
PTPN6-219ENST00000542848 CSADQ9Y600 493 aa14.85□□□□□ -0.03
PTPN6-219ENST00000542848 EYA2O00167 538 aa14.84□□□□□ -0.03
PTPN6-219ENST00000542848 RFX5P48382 616 aaPredicted RBP14.84□□□□□ -0.03
PTPN6-219ENST00000542848 SP3Q02447 781 aa14.84□□□□□ -0.03
PTPN6-219ENST00000542848 VGLL4Q14135 290 aa14.84□□□□□ -0.03
PTPN6-219ENST00000542848 PRPF38BQ5VTL8 546 aaKnown RBP14.84□□□□□ -0.03
PTPN6-219ENST00000542848 HOOK2Q96ED9 719 aa14.84□□□□□ -0.03
PTPN6-219ENST00000542848 TMOD2Q9NZR1 351 aa14.84□□□□□ -0.03
PTPN6-219ENST00000542848 PTPN22Q9Y2R2 807 aa14.84□□□□□ -0.03
PTPN6-219ENST00000542848 SLC5A1P13866 664 aa14.83□□□□□ -0.04
PTPN6-219ENST00000542848 APOBEC3HQ6NTF7 200 aaKnown RBP14.83□□□□□ -0.04
PTPN6-219ENST00000542848 WDR66Q8TBY9 1149 aa14.83□□□□□ -0.04
PTPN6-219ENST00000542848 CD99L2Q8TCZ2 262 aa14.83□□□□□ -0.04
PTPN6-219ENST00000542848 BRI3BPQ8WY22 251 aa14.83□□□□□ -0.04
PTPN6-219ENST00000542848 LPIN2Q92539 896 aa14.83□□□□□ -0.04
PTPN6-219ENST00000542848 EFCC1Q9HA90 598 aa14.83□□□□□ -0.04
PTPN6-219ENST00000542848 FBXO3Q9UK99 471 aa14.83□□□□□ -0.04
PTPN6-219ENST00000542848 MKI67P46013 3256 aaKnown RBP14.83□□□□□ -0.04
PTPN6-219ENST00000542848 CCL15-CCL14A0A0B4J2E2 113 aa14.82□□□□□ -0.04
PTPN6-219ENST00000542848 CACNB3P54284 484 aa14.82□□□□□ -0.04
PTPN6-219ENST00000542848 ARHGEF6Q15052 776 aa14.82□□□□□ -0.04
PTPN6-219ENST00000542848 CCL15Q16663 113 aa14.82□□□□□ -0.04
PTPN6-219ENST00000542848 ERO1BQ86YB8 467 aa14.82□□□□□ -0.04
PTPN6-219ENST00000542848 TRMT2AQ8IZ69 625 aaKnown RBP14.82□□□□□ -0.04
PTPN6-219ENST00000542848 CNKSR2Q8WXI2 1034 aa14.82□□□□□ -0.04
PTPN6-219ENST00000542848 ZFYVE28Q9HCC9 887 aa14.82□□□□□ -0.04
PTPN6-219ENST00000542848 SPDYE5A6NIY4 337 aa14.81□□□□□ -0.04
PTPN6-219ENST00000542848 CT47B1P0C2W7 299 aaPredicted RBP14.81□□□□□ -0.04
PTPN6-219ENST00000542848 TAF1CQ15572 869 aaPredicted RBP14.81□□□□□ -0.04
PTPN6-219ENST00000542848 ATG9AQ7Z3C6 839 aa14.81□□□□□ -0.04
PTPN6-219ENST00000542848 OTUD5Q96G74 571 aa14.81□□□□□ -0.04
PTPN6-219ENST00000542848 SMC4Q9NTJ3 1288 aa14.81□□□□□ -0.04
PTPN6-219ENST00000542848 HDAC5Q9UQL6 1122 aa14.81□□□□□ -0.04
PTPN6-219ENST00000542848 RPAP1Q9BWH6 1393 aaPredicted RBP14.81□□□□□ -0.04
PTPN6-219ENST00000542848 WDHD1O75717 1129 aaPredicted RBP14.8□□□□□ -0.04
PTPN6-219ENST00000542848 CIAO1O76071 339 aa14.8□□□□□ -0.04
PTPN6-219ENST00000542848 CETPP11597 493 aa14.8□□□□□ -0.04
PTPN6-219ENST00000542848 DCAF15Q66K64 600 aa14.8□□□□□ -0.04
PTPN6-219ENST00000542848 ARMC5Q96C12 935 aa14.8□□□□□ -0.04
PTPN6-219ENST00000542848 CDCA7LQ96GN5 454 aa14.8□□□□□ -0.04
PTPN6-219ENST00000542848 WRNIP1Q96S55 665 aa14.8□□□□□ -0.04
PTPN6-219ENST00000542848 ZCCHC17Q9NP64 241 aaKnown RBP14.8□□□□□ -0.04
PTPN6-219ENST00000542848 SNCAIPQ9Y6H5 919 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms