RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 PDHXO00330 501 aa4.41□□□□□ -1.7
CHD4-209ENST00000542717 HMGCRP04035 888 aa4.41□□□□□ -1.7
CHD4-209ENST00000542717 ATN1P54259 1190 aaPredicted RBP4.41□□□□□ -1.7
CHD4-209ENST00000542717 MAP3K9P80192 1104 aa4.41□□□□□ -1.7
CHD4-209ENST00000542717 VGLL4Q14135 290 aa4.41□□□□□ -1.7
CHD4-209ENST00000542717 TTLL7Q6ZT98 887 aa4.41□□□□□ -1.7
CHD4-209ENST00000542717 KIAA0825Q8IV33 1275 aa4.41□□□□□ -1.7
CHD4-209ENST00000542717 ZNF34Q8IZ26 560 aa4.41□□□□□ -1.7
CHD4-209ENST00000542717 MTMR14Q8NCE2 650 aa4.41□□□□□ -1.7
CHD4-209ENST00000542717 CELF1Q92879 486 aaKnown RBP4.41□□□□□ -1.7
CHD4-209ENST00000542717 BADQ92934 168 aa4.41□□□□□ -1.7
CHD4-209ENST00000542717 PARK7Q99497 189 aaKnown RBP4.41□□□□□ -1.7
CHD4-209ENST00000542717 SENP6Q9GZR1 1112 aaPredicted RBP4.41□□□□□ -1.7
CHD4-209ENST00000542717 OGDHLQ9ULD0 1010 aa4.41□□□□□ -1.7
CHD4-209ENST00000542717 MYO3BQ8WXR4 1341 aa4.41□□□□□ -1.7
CHD4-209ENST00000542717 CDH23Q9H251 3354 aa4.4□□□□□ -1.7
CHD4-209ENST00000542717 LAMB1P07942 1786 aa4.4□□□□□ -1.7
CHD4-209ENST00000542717 GNAT3A8MTJ3 354 aa4.4□□□□□ -1.71
CHD4-209ENST00000542717 RGS20O76081 388 aa4.4□□□□□ -1.71
CHD4-209ENST00000542717 ALADP13716 330 aa4.4□□□□□ -1.71
CHD4-209ENST00000542717 MYL6BP14649 208 aa4.4□□□□□ -1.71
CHD4-209ENST00000542717 SSTR3P32745 418 aaPredicted RBP4.4□□□□□ -1.71
CHD4-209ENST00000542717 ID4P47928 161 aa4.4□□□□□ -1.71
CHD4-209ENST00000542717 IRF5Q13568 498 aa4.4□□□□□ -1.71
CHD4-209ENST00000542717 RASA3Q14644 834 aa4.4□□□□□ -1.71
CHD4-209ENST00000542717 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.4□□□□□ -1.71
CHD4-209ENST00000542717 ERO1BQ86YB8 467 aa4.4□□□□□ -1.71
CHD4-209ENST00000542717 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.4□□□□□ -1.71
CHD4-209ENST00000542717 ZNF428Q96B54 188 aa4.4□□□□□ -1.71
CHD4-209ENST00000542717 CARD14Q9BXL6 1004 aa4.4□□□□□ -1.71
CHD4-209ENST00000542717 TRMT112Q9UI30 125 aaKnown RBP4.4□□□□□ -1.71
CHD4-209ENST00000542717 ATP11BQ9Y2G3 1177 aa4.4□□□□□ -1.71
CHD4-209ENST00000542717 PTPRZ1P23471 2315 aaPredicted RBP4.4□□□□□ -1.71
CHD4-209ENST00000542717 ZNF804BA4D1E1 1349 aa4.4□□□□□ -1.71
CHD4-209ENST00000542717 NUP98P52948 1817 aa4.39□□□□□ -1.71
CHD4-209ENST00000542717 SPDYE5A6NIY4 337 aa4.39□□□□□ -1.71
CHD4-209ENST00000542717 IRF6O14896 467 aa4.39□□□□□ -1.71
CHD4-209ENST00000542717 MMP14P50281 582 aa4.39□□□□□ -1.71
CHD4-209ENST00000542717 RBM5P52756 815 aaKnown RBP eCLIP4.39□□□□□ -1.71
CHD4-209ENST00000542717 PTPN5P54829 565 aa4.39□□□□□ -1.71
CHD4-209ENST00000542717 RTP1P59025 263 aa4.39□□□□□ -1.71
CHD4-209ENST00000542717 RPS8P62241 208 aaKnown RBP4.39□□□□□ -1.71
CHD4-209ENST00000542717 NEUROD1Q13562 356 aa4.39□□□□□ -1.71
CHD4-209ENST00000542717 ADGRE1Q14246 886 aa4.39□□□□□ -1.71
CHD4-209ENST00000542717 ACAP1Q15027 740 aa4.39□□□□□ -1.71
CHD4-209ENST00000542717 DACT2Q5SW24 774 aa4.39□□□□□ -1.71
CHD4-209ENST00000542717 GIGYF2Q6Y7W6 1299 aaKnown RBP4.39□□□□□ -1.71
CHD4-209ENST00000542717 ANKRD23Q86SG2 305 aa4.39□□□□□ -1.71
CHD4-209ENST00000542717 IL17REQ8NFR9 667 aa4.39□□□□□ -1.71
CHD4-209ENST00000542717 CNTNAP3BQ96NU0 1288 aa4.39□□□□□ -1.71
CHD4-209ENST00000542717 TESK2Q96S53 571 aa4.39□□□□□ -1.71
CHD4-209ENST00000542717 CNTNAP3Q9BZ76 1288 aa4.39□□□□□ -1.71
CHD4-209ENST00000542717 SH3TC1Q8TE82 1336 aa4.39□□□□□ -1.71
CHD4-209ENST00000542717 CHD8Q9HCK8 2581 aa4.38□□□□□ -1.71
CHD4-209ENST00000542717 F8W031 263 aaPredicted RBP4.38□□□□□ -1.71
CHD4-209ENST00000542717 ERC2O15083 957 aa4.38□□□□□ -1.71
CHD4-209ENST00000542717 TLL1O43897 1013 aa4.38□□□□□ -1.71
CHD4-209ENST00000542717 CYP2C8P10632 490 aa4.38□□□□□ -1.71
CHD4-209ENST00000542717 BCRP11274 1271 aa4.38□□□□□ -1.71
CHD4-209ENST00000542717 COL6A1P12109 1028 aa4.38□□□□□ -1.71
CHD4-209ENST00000542717 TRIM32Q13049 653 aa4.38□□□□□ -1.71
CHD4-209ENST00000542717 PPIL2Q13356 520 aa4.38□□□□□ -1.71
CHD4-209ENST00000542717 TNFAIP1Q13829 316 aa4.38□□□□□ -1.71
CHD4-209ENST00000542717 CDCA8Q53HL2 280 aa4.38□□□□□ -1.71
CHD4-209ENST00000542717 STRIP1Q5VSL9 837 aa4.38□□□□□ -1.71
CHD4-209ENST00000542717 TTLL5Q6EMB2 1281 aa4.38□□□□□ -1.71
CHD4-209ENST00000542717 GJD3Q8N144 294 aa4.38□□□□□ -1.71
CHD4-209ENST00000542717 SMCR8Q8TEV9 937 aaPredicted RBP4.38□□□□□ -1.71
CHD4-209ENST00000542717 HERVK_113Q902F9 699 aa4.38□□□□□ -1.71
CHD4-209ENST00000542717 ZKSCAN4Q969J2 545 aaPredicted RBP4.38□□□□□ -1.71
CHD4-209ENST00000542717 MFSD14AQ96MC6 490 aa4.38□□□□□ -1.71
CHD4-209ENST00000542717 FAM86C1Q9NVL1 165 aa4.38□□□□□ -1.71
CHD4-209ENST00000542717 PODXL2Q9NZ53 605 aa4.38□□□□□ -1.71
CHD4-209ENST00000542717 COG5Q9UP83 839 aa4.38□□□□□ -1.71
CHD4-209ENST00000542717 CFAP54Q96N23 3096 aa4.37□□□□□ -1.71
CHD4-209ENST00000542717 MGAMO43451 1857 aa4.37□□□□□ -1.71
CHD4-209ENST00000542717 MED19A0JLT2 244 aaPredicted RBP4.37□□□□□ -1.71
CHD4-209ENST00000542717 GTPBP6O43824 516 aaPredicted RBP4.37□□□□□ -1.71
CHD4-209ENST00000542717 PRKAR2AP13861 404 aaKnown RBP4.37□□□□□ -1.71
CHD4-209ENST00000542717 ATP2B4P23634 1241 aa4.37□□□□□ -1.71
CHD4-209ENST00000542717 IL13P35225 146 aa4.37□□□□□ -1.71
CHD4-209ENST00000542717 PBX2P40425 430 aa4.37□□□□□ -1.71
CHD4-209ENST00000542717 CFAP100Q494V2 611 aa4.37□□□□□ -1.71
CHD4-209ENST00000542717 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.37□□□□□ -1.71
CHD4-209ENST00000542717 GAS2L2Q8NHY3 880 aa4.37□□□□□ -1.71
CHD4-209ENST00000542717 HLA-CQ95604 372 aa4.37□□□□□ -1.71
CHD4-209ENST00000542717 ZBED3Q96IU2 234 aaPredicted RBP4.37□□□□□ -1.71
CHD4-209ENST00000542717 WRNIP1Q96S55 665 aa4.37□□□□□ -1.71
CHD4-209ENST00000542717 PBX4Q9BYU1 374 aa4.37□□□□□ -1.71
CHD4-209ENST00000542717 SLC28A3Q9HAS3 691 aa4.37□□□□□ -1.71
CHD4-209ENST00000542717 CD320Q9NPF0 282 aa4.37□□□□□ -1.71
CHD4-209ENST00000542717 MSRAQ9UJ68 235 aa4.37□□□□□ -1.71
CHD4-209ENST00000542717 PCDHAC2Q9Y5I4 1007 aa4.37□□□□□ -1.71
CHD4-209ENST00000542717 LRRC37AA6NMS7 1700 aa4.37□□□□□ -1.71
CHD4-209ENST00000542717 ANKRD36CQ5JPF3 1778 aa4.37□□□□□ -1.71
CHD4-209ENST00000542717 LAMB2P55268 1798 aa4.36□□□□□ -1.71
CHD4-209ENST00000542717 SOWAHBA6NEL2 793 aa4.36□□□□□ -1.71
CHD4-209ENST00000542717 GRXCR1A8MXD5 290 aa4.36□□□□□ -1.71
CHD4-209ENST00000542717 TCP10L2B9ZVM9 353 aa4.36□□□□□ -1.71
CHD4-209ENST00000542717 DCXO43602 365 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms