RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 TBC1D2Q9BYX2 928 aa15.9■□□□□ 0.14
CHFR-221ENST00000542714 ZC3H12CQ9C0D7 883 aaKnown RBP15.9■□□□□ 0.14
CHFR-221ENST00000542714 TAF6LQ9Y6J9 622 aa15.9■□□□□ 0.14
CHFR-221ENST00000542714 DOK7Q18PE1 504 aa15.89■□□□□ 0.13
CHFR-221ENST00000542714 CCDC93Q567U6 631 aa15.89■□□□□ 0.13
CHFR-221ENST00000542714 SNX21Q969T3 373 aa15.89■□□□□ 0.13
CHFR-221ENST00000542714 STRBPQ96SI9 672 aaKnown RBP15.89■□□□□ 0.13
CHFR-221ENST00000542714 ADAMTSL1Q8N6G6 1762 aa15.89■□□□□ 0.13
CHFR-221ENST00000542714 COL4A5P29400 1685 aa15.89■□□□□ 0.13
CHFR-221ENST00000542714 SPTY2D1Q68D10 685 aaPredicted RBP15.88■□□□□ 0.13
CHFR-221ENST00000542714 NAA16Q6N069 864 aaPredicted RBP15.88■□□□□ 0.13
CHFR-221ENST00000542714 LCORLQ8N3X6 602 aa15.88■□□□□ 0.13
CHFR-221ENST00000542714 ZGPATQ8N5A5 531 aaKnown RBP15.88■□□□□ 0.13
CHFR-221ENST00000542714 MIGA1Q8NAN2 632 aa15.88■□□□□ 0.13
CHFR-221ENST00000542714 ARMT1Q9H993 441 aa15.88■□□□□ 0.13
CHFR-221ENST00000542714 PIM2Q9P1W9 311 aa15.88■□□□□ 0.13
CHFR-221ENST00000542714 BAZ2AQ9UIF9 1905 aaKnown RBP15.88■□□□□ 0.13
CHFR-221ENST00000542714 RPAP1Q9BWH6 1393 aaPredicted RBP15.87■□□□□ 0.13
CHFR-221ENST00000542714 SLC4A3P48751 1232 aa15.87■□□□□ 0.13
CHFR-221ENST00000542714 KIAA2012Q0VF49 1180 aa15.87■□□□□ 0.13
CHFR-221ENST00000542714 ADCK5Q3MIX3 580 aa15.87■□□□□ 0.13
CHFR-221ENST00000542714 GRIPAP1Q4V328 841 aa15.87■□□□□ 0.13
CHFR-221ENST00000542714 AIDAQ96BJ3 306 aa15.87■□□□□ 0.13
CHFR-221ENST00000542714 RIOK1Q9BRS2 568 aaKnown RBP15.87■□□□□ 0.13
CHFR-221ENST00000542714 TIAM2Q8IVF5 1701 aa15.87■□□□□ 0.13
CHFR-221ENST00000542714 LAMB1P07942 1786 aa15.86■□□□□ 0.13
CHFR-221ENST00000542714 IGSF3O75054 1194 aa15.86■□□□□ 0.13
CHFR-221ENST00000542714 LDHBP07195 334 aaKnown RBP15.86■□□□□ 0.13
CHFR-221ENST00000542714 CYP21A2P08686 494 aa15.86■□□□□ 0.13
CHFR-221ENST00000542714 DYNLL1P63167 89 aaKnown RBP15.86■□□□□ 0.13
CHFR-221ENST00000542714 GTF2IP78347 998 aa15.86■□□□□ 0.13
CHFR-221ENST00000542714 COL9A3Q14050 684 aaPredicted RBP15.86■□□□□ 0.13
CHFR-221ENST00000542714 AOC3Q16853 763 aa15.86■□□□□ 0.13
CHFR-221ENST00000542714 TSGA10IPQ3SY00 556 aa15.86■□□□□ 0.13
CHFR-221ENST00000542714 DALRD3Q5D0E6 543 aaKnown RBP15.86■□□□□ 0.13
CHFR-221ENST00000542714 TTLL5Q6EMB2 1281 aa15.86■□□□□ 0.13
CHFR-221ENST00000542714 RTKN2Q8IZC4 609 aa15.86■□□□□ 0.13
CHFR-221ENST00000542714 KLHL34Q8N239 644 aa15.86■□□□□ 0.13
CHFR-221ENST00000542714 SUPT20HQ8NEM7 779 aa15.86■□□□□ 0.13
CHFR-221ENST00000542714 PSMD1Q99460 953 aa15.86■□□□□ 0.13
CHFR-221ENST00000542714 DBNDD1Q9H9R9 158 aa15.86■□□□□ 0.13
CHFR-221ENST00000542714 EPB41L4AQ9HCS5 686 aaPredicted RBP15.86■□□□□ 0.13
CHFR-221ENST00000542714 PPP1R1BQ9UD71 204 aaPredicted RBP15.86■□□□□ 0.13
CHFR-221ENST00000542714 FOCADQ5VW36 1801 aa15.86■□□□□ 0.13
CHFR-221ENST00000542714 NAV1Q8NEY1 1877 aa15.85■□□□□ 0.13
CHFR-221ENST00000542714 MAGEB6P1A0A0J9YX57 407 aa15.85■□□□□ 0.13
CHFR-221ENST00000542714 PRKAB2O43741 272 aa15.85■□□□□ 0.13
CHFR-221ENST00000542714 ECE2O60344 883 aa15.85■□□□□ 0.13
CHFR-221ENST00000542714 FGAP02671 866 aa15.85■□□□□ 0.13
CHFR-221ENST00000542714 BECN1Q14457 450 aa15.85■□□□□ 0.13
CHFR-221ENST00000542714 MFSD14BQ5SR56 506 aa15.85■□□□□ 0.13
CHFR-221ENST00000542714 RNF20Q5VTR2 975 aa15.85■□□□□ 0.13
CHFR-221ENST00000542714 TMED8Q6PL24 325 aaPredicted RBP15.85■□□□□ 0.13
CHFR-221ENST00000542714 DZIP1Q86YF9 867 aaKnown RBP15.85■□□□□ 0.13
CHFR-221ENST00000542714 CERS5Q8N5B7 392 aa15.85■□□□□ 0.13
CHFR-221ENST00000542714 NLGN2Q8NFZ4 835 aa15.85■□□□□ 0.13
CHFR-221ENST00000542714 TBC1D22AQ8WUA7 517 aa15.85■□□□□ 0.13
CHFR-221ENST00000542714 UPF3BQ9BZI7 483 aaKnown RBP15.85■□□□□ 0.13
CHFR-221ENST00000542714 SPON1Q9HCB6 807 aa15.85■□□□□ 0.13
CHFR-221ENST00000542714 KCNQ5Q9NR82 932 aa15.85■□□□□ 0.13
CHFR-221ENST00000542714 GSG1L2A8MUP6 293 aa15.84■□□□□ 0.13
CHFR-221ENST00000542714 ALX1Q15699 326 aa15.84■□□□□ 0.13
CHFR-221ENST00000542714 STOX1Q6ZVD7 989 aa15.84■□□□□ 0.13
CHFR-221ENST00000542714 PODNQ7Z5L7 613 aa15.84■□□□□ 0.13
CHFR-221ENST00000542714 JAKMIP1Q96N16 626 aaKnown RBP15.84■□□□□ 0.13
CHFR-221ENST00000542714 TM6SF1Q9BZW5 370 aa15.84■□□□□ 0.13
CHFR-221ENST00000542714 DDX60LQ5H9U9 1706 aaKnown RBP15.84■□□□□ 0.13
CHFR-221ENST00000542714 ZMYM6O95789 1325 aa15.84■□□□□ 0.13
CHFR-221ENST00000542714 ECM29Q5VYK3 1845 aa15.84■□□□□ 0.13
CHFR-221ENST00000542714 PATL2C9JE40 543 aaKnown RBP15.83■□□□□ 0.12
CHFR-221ENST00000542714 PPIP5K2O43314 1243 aa15.83■□□□□ 0.12
CHFR-221ENST00000542714 CPA1P15085 419 aa15.83■□□□□ 0.12
CHFR-221ENST00000542714 ZKSCAN1P17029 563 aaPredicted RBP15.83■□□□□ 0.12
CHFR-221ENST00000542714 NEK4P51957 841 aa15.83■□□□□ 0.12
CHFR-221ENST00000542714 DIXDC1Q155Q3 683 aa15.83■□□□□ 0.12
CHFR-221ENST00000542714 SOGA3Q5TF21 947 aa15.83■□□□□ 0.12
CHFR-221ENST00000542714 TTC14Q96N46 770 aa15.83■□□□□ 0.12
CHFR-221ENST00000542714 MXD3Q9BW11 206 aa15.83■□□□□ 0.12
CHFR-221ENST00000542714 ZSWIM6Q9HCJ5 1215 aa15.83■□□□□ 0.12
CHFR-221ENST00000542714 SLC4A4Q9Y6R1 1079 aa15.83■□□□□ 0.12
CHFR-221ENST00000542714 YDJCA8MPS7 323 aa15.82■□□□□ 0.12
CHFR-221ENST00000542714 G3V3G9 751 aa15.82■□□□□ 0.12
CHFR-221ENST00000542714 GNAT2P19087 354 aa15.82■□□□□ 0.12
CHFR-221ENST00000542714 CASTP20810 708 aaKnown RBP15.82■□□□□ 0.12
CHFR-221ENST00000542714 DCAF8Q5TAQ9 597 aa15.82■□□□□ 0.12
CHFR-221ENST00000542714 HSCBQ8IWL3 235 aa15.82■□□□□ 0.12
CHFR-221ENST00000542714 IFNL3Q8IZI9 196 aa15.82■□□□□ 0.12
CHFR-221ENST00000542714 FBXW7Q969H0 707 aa15.82■□□□□ 0.12
CHFR-221ENST00000542714 NBPF3Q9H094 633 aa15.82■□□□□ 0.12
CHFR-221ENST00000542714 ZNF277Q9NRM2 450 aaPredicted RBP15.82■□□□□ 0.12
CHFR-221ENST00000542714 CTNNA3Q9UI47 895 aa15.82■□□□□ 0.12
CHFR-221ENST00000542714 MROH7-TTC4A0A0A0MT08 1334 aa15.82■□□□□ 0.12
CHFR-221ENST00000542714 GAKO14976 1311 aa15.81■□□□□ 0.12
CHFR-221ENST00000542714 ST18O60284 1047 aa15.81■□□□□ 0.12
CHFR-221ENST00000542714 GSTO1P78417 241 aa15.81■□□□□ 0.12
CHFR-221ENST00000542714 DACT2Q5SW24 774 aa15.81■□□□□ 0.12
CHFR-221ENST00000542714 AATFQ9NY61 560 aaKnown RBP eCLIP15.81■□□□□ 0.12
CHFR-221ENST00000542714 SUGT1Q9Y2Z0 365 aa15.81■□□□□ 0.12
CHFR-221ENST00000542714 K7ELQ4 463 aaPredicted RBP15.8■□□□□ 0.12
CHFR-221ENST00000542714 NFKBIEO00221 500 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms