RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 KCNJ4P48050 445 aa14.96□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 GORABQ5T7V8 394 aa14.96□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 ZNF296Q8WUU4 475 aaPredicted RBP14.96□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 RFX7Q2KHR2 1363 aa14.96□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 ZNF804BA4D1E1 1349 aa14.95□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 POLR2AP24928 1970 aaKnown RBP14.95□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 TAF5LO75529 589 aa14.95□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 ARID4AP29374 1257 aaPredicted RBP14.95□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 HELBQ8NG08 1087 aaPredicted RBP14.95□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 OTUD5Q96G74 571 aa14.95□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 ANKIB1Q9P2G1 1089 aa14.95□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 HDAC9Q9UKV0 1011 aa14.95□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 DUOX1Q9NRD9 1551 aa14.94□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 CAVIN4Q5BKX8 364 aa14.94□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 TTC39AQ5SRH9 613 aa14.94□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 CDC37L1Q7L3B6 337 aa14.94□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 ZC3H15Q8WU90 426 aaKnown RBP14.94□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 HAUS7Q99871 368 aa14.94□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 BCL11AQ9H165 835 aa14.94□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 GNL3LQ9NVN8 582 aaKnown RBP14.94□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 GGA1Q9UJY5 639 aa14.94□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 MED23Q9ULK4 1368 aa14.94□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 VCANP13611 3396 aa14.94□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 MYH13Q9UKX3 1938 aa14.94□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 PDS5AQ29RF7 1337 aaKnown RBP14.93□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 SEMA3EO15041 775 aa14.93□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 SLC10A3P09131 477 aa14.93□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 SDSP20132 328 aa14.93□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 ADORA1P30542 326 aa14.93□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 CCDC102BQ68D86 513 aa14.93□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 EVI5LQ96CN4 794 aa14.93□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 IRS2Q9Y4H2 1338 aa14.92□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 IGSF3O75054 1194 aa14.92□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 CDC45O75419 566 aa14.92□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 ZNF157P51786 506 aaPredicted RBP14.92□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 HIRAP54198 1017 aaPredicted RBP14.92□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 GPSM2P81274 684 aa14.92□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 TSHZ3Q63HK5 1081 aa14.92□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 CASC1Q6TDU7 716 aa14.92□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 NSFL1CQ9UNZ2 370 aaKnown RBP14.92□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 HIP1O00291 1037 aa14.91□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 UFL1O94874 794 aa14.91□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 DLK2Q6UY11 383 aa14.91□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 FBXO33Q7Z6M2 555 aa14.91□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 MPNDQ8N594 471 aa14.91□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 TBC1D16Q8TBP0 767 aa14.91□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 BOLA2Q9H3K6 86 aa14.91□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 DOCK2Q92608 1830 aa14.9□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 TRIM6-TRIM34B2RNG4 842 aa14.9□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 PHKA1P46020 1223 aa14.9□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 MAPK8IP2Q13387 824 aaPredicted RBP14.9□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 TTF1Q15361 905 aaPredicted RBP14.9□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 LRRFIP1Q32MZ4 808 aaKnown RBP14.9□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 C8orf34Q49A92 452 aa14.9□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 DPP8Q6V1X1 898 aaPredicted RBP14.9□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 ZNF804AQ7Z570 1209 aa14.9□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 VPS37DQ86XT2 251 aa14.9□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 REM2Q8IYK8 340 aaPredicted RBP14.9□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 LARGE2Q8N3Y3 721 aa14.9□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 SUPT20HQ8NEM7 779 aa14.9□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 FAM84BQ96KN1 310 aaPredicted RBP14.9□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 EYA3Q99504 573 aa14.9□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 RTFDC1Q9BY42 306 aaPredicted RBP14.9□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 GBA2Q9HCG7 927 aaPredicted RBP14.9□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 SPTBN5Q9NRC6 3674 aaKnown RBP14.9□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 MYH7P12883 1935 aa14.9□□□□□ -0.02
CACNA1C-IT3-201ENST00000542680 HIBADHP31937 336 aaKnown RBP14.89□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 NOM1Q5C9Z4 860 aaKnown RBP14.89□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 TMED8Q6PL24 325 aaPredicted RBP14.89□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 USP48Q86UV5 1035 aa14.89□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 TRPM4Q8TD43 1214 aa14.89□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 BACH2Q9BYV9 841 aa14.89□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 PAG1Q9NWQ8 432 aa14.89□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 DENND2AQ9ULE3 1009 aa14.89□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 MCAMP43121 646 aa14.88□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 GMPSP49915 693 aaPredicted RBP14.88□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 KBTBD3Q8NAB2 608 aa14.88□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 SPATA5Q8NB90 893 aa14.88□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 RILPL2Q969X0 211 aa14.88□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 VPS33BQ9H267 617 aa14.88□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 POLLQ9UGP5 575 aa14.88□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 H0YGN5 161 aa14.87□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 SNAP23O00161 211 aa14.87□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 TBC1D8O95759 1140 aa14.87□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 GYG1P46976 350 aa14.87□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 BCAMP50895 628 aa14.87□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 RASGRF1Q13972 1273 aa14.87□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 C2orf69Q8N8R5 385 aa14.87□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 DNAJC2Q99543 621 aaKnown RBP14.87□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 MAST2Q6P0Q8 1798 aa14.86□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 C6orf229H3BNL8 230 aa14.86□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 ZFYP08048 801 aaPredicted RBP14.86□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 IL1R1P14778 569 aa14.86□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 TBC1D9Q6ZT07 1266 aa14.86□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 NIM1KQ8IY84 436 aa14.86□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 FSD1Q9BTV5 496 aa14.86□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 COA1Q9GZY4 146 aa14.86□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 HMG20BQ9P0W2 317 aa14.86□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 RAD50Q92878 1312 aa14.86□□□□□ -0.03
CACNA1C-IT3-201ENST00000542680 GPR25O00155 361 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms