RNA–Protein interactions for RNA: ENST00000542362.1

POLE-218, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 4

Gene POLE, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-218	ENST00000542362	CELF2	O95319	508 aa	Known RBP	11.25	□□□□□ -0.61
POLE-218	ENST00000542362	MCAM	P43121	646 aa		11.25	□□□□□ -0.61
POLE-218	ENST00000542362	CACNB3	P54284	484 aa		11.25	□□□□□ -0.61
POLE-218	ENST00000542362	DIXDC1	Q155Q3	683 aa		11.25	□□□□□ -0.61
POLE-218	ENST00000542362	EAF2	Q96CJ1	260 aa	Predicted RBP	11.25	□□□□□ -0.61
POLE-218	ENST00000542362	SNRK	Q9NRH2	765 aa		11.25	□□□□□ -0.61
POLE-218	ENST00000542362	DBNL	Q9UJU6	430 aa	Known RBP	11.25	□□□□□ -0.61
POLE-218	ENST00000542362	HDAC5	Q9UQL6	1122 aa		11.25	□□□□□ -0.61
POLE-218	ENST00000542362	PCDHB15	Q9Y5E8	787 aa		11.25	□□□□□ -0.61
POLE-218	ENST00000542362	PHIP	Q8WWQ0	1821 aa		11.25	□□□□□ -0.61
POLE-218	ENST00000542362	PTPRF	P10586	1907 aa		11.25	□□□□□ -0.61
POLE-218	ENST00000542362	DDX60L	Q5H9U9	1706 aa	Known RBP	11.24	□□□□□ -0.61
POLE-218	ENST00000542362	RBM5	P52756	815 aa	Known RBP eCLIP	11.24	□□□□□ -0.61
POLE-218	ENST00000542362	TBC1D9	Q6ZT07	1266 aa		11.24	□□□□□ -0.61
POLE-218	ENST00000542362	ZNF384	Q8TF68	577 aa		11.24	□□□□□ -0.61
POLE-218	ENST00000542362	CDCA5	Q96FF9	252 aa		11.24	□□□□□ -0.61
POLE-218	ENST00000542362	TDRD3	Q9H7E2	651 aa	Known RBP	11.24	□□□□□ -0.61
POLE-218	ENST00000542362	NOP58	Q9Y2X3	529 aa	Known RBP	11.24	□□□□□ -0.61
POLE-218	ENST00000542362	SPDYE2B	A6NHP3	402 aa		11.23	□□□□□ -0.61
POLE-218	ENST00000542362	TMEM88B	A6NKF7	163 aa		11.23	□□□□□ -0.61
POLE-218	ENST00000542362	SPDYE6	P0CI01	402 aa		11.23	□□□□□ -0.61
POLE-218	ENST00000542362	MS4A1	P11836	297 aa		11.23	□□□□□ -0.61
POLE-218	ENST00000542362	CRK	P46108	304 aa		11.23	□□□□□ -0.61
POLE-218	ENST00000542362	FKBP1A	P62942	108 aa	Known RBP	11.23	□□□□□ -0.61
POLE-218	ENST00000542362	GRM1	Q13255	1194 aa		11.23	□□□□□ -0.61
POLE-218	ENST00000542362	PRKG1	Q13976	671 aa		11.23	□□□□□ -0.61
POLE-218	ENST00000542362	DLGAP5	Q15398	846 aa		11.23	□□□□□ -0.61
POLE-218	ENST00000542362	CDC37L1	Q7L3B6	337 aa		11.23	□□□□□ -0.61
POLE-218	ENST00000542362	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.23	□□□□□ -0.61
POLE-218	ENST00000542362	ZC3H15	Q8WU90	426 aa	Known RBP	11.23	□□□□□ -0.61
POLE-218	ENST00000542362	DCPS	Q96C86	337 aa	Known RBP	11.23	□□□□□ -0.61
POLE-218	ENST00000542362	CREBZF	Q9NS37	354 aa		11.23	□□□□□ -0.61
POLE-218	ENST00000542362	HMG20B	Q9P0W2	317 aa		11.23	□□□□□ -0.61
POLE-218	ENST00000542362	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.23	□□□□□ -0.61
POLE-218	ENST00000542362	CNTNAP1	P78357	1384 aa		11.23	□□□□□ -0.61
POLE-218	ENST00000542362	CASP8AP2	Q9UKL3	1982 aa		11.23	□□□□□ -0.61
POLE-218	ENST00000542362	SLURP2	P0DP57	97 aa		11.22	□□□□□ -0.61
POLE-218	ENST00000542362	ARID4A	P29374	1257 aa	Predicted RBP	11.22	□□□□□ -0.61
POLE-218	ENST00000542362	DOCK1	Q14185	1865 aa		11.22	□□□□□ -0.61
POLE-218	ENST00000542362	CYP4F22	Q6NT55	531 aa		11.22	□□□□□ -0.61
POLE-218	ENST00000542362	OGFOD1	Q8N543	542 aa		11.22	□□□□□ -0.61
POLE-218	ENST00000542362	EXOC6	Q8TAG9	804 aa		11.22	□□□□□ -0.61
POLE-218	ENST00000542362	RHPN1	Q8TCX5	695 aa		11.22	□□□□□ -0.61
POLE-218	ENST00000542362	ZIC5	Q96T25	663 aa		11.22	□□□□□ -0.61
POLE-218	ENST00000542362	VEZT	Q9HBM0	779 aa		11.22	□□□□□ -0.61
POLE-218	ENST00000542362	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.22	□□□□□ -0.61
POLE-218	ENST00000542362	HDAC9	Q9UKV0	1011 aa		11.22	□□□□□ -0.61
POLE-218	ENST00000542362	ABT1	Q9ULW3	272 aa	Known RBP	11.22	□□□□□ -0.61
POLE-218	ENST00000542362	ZSWIM8	A7E2V4	1837 aa		11.21	□□□□□ -0.61
POLE-218	ENST00000542362	TCP10L2	B9ZVM9	353 aa		11.21	□□□□□ -0.61
POLE-218	ENST00000542362	AOC2	O75106	756 aa		11.21	□□□□□ -0.61
POLE-218	ENST00000542362	SLC34A2	O95436	690 aa		11.21	□□□□□ -0.61
POLE-218	ENST00000542362	VEGFB	P49765	207 aa		11.21	□□□□□ -0.61
POLE-218	ENST00000542362	AACS	Q86V21	672 aa		11.21	□□□□□ -0.61
POLE-218	ENST00000542362	SULF1	Q8IWU6	871 aa		11.21	□□□□□ -0.61
POLE-218	ENST00000542362	EDC3	Q96F86	508 aa	Known RBP	11.21	□□□□□ -0.61
POLE-218	ENST00000542362	ZNF70	Q9UC06	446 aa	Predicted RBP	11.21	□□□□□ -0.61
POLE-218	ENST00000542362	ABCF2	Q9UG63	623 aa		11.21	□□□□□ -0.61
POLE-218	ENST00000542362	AKAP2	Q9Y2D5	859 aa		11.21	□□□□□ -0.61
POLE-218	ENST00000542362	DAGLA	Q9Y4D2	1042 aa		11.21	□□□□□ -0.61
POLE-218	ENST00000542362	PITPNM2	Q9BZ72	1349 aa		11.2	□□□□□ -0.62
POLE-218	ENST00000542362	CHGB	P05060	677 aa		11.2	□□□□□ -0.62
POLE-218	ENST00000542362	ZAP70	P43403	619 aa		11.2	□□□□□ -0.62
POLE-218	ENST00000542362	TTC39A	Q5SRH9	613 aa		11.2	□□□□□ -0.62
POLE-218	ENST00000542362	TSHZ3	Q63HK5	1081 aa		11.2	□□□□□ -0.62
POLE-218	ENST00000542362	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.2	□□□□□ -0.62
POLE-218	ENST00000542362	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.2	□□□□□ -0.62
POLE-218	ENST00000542362	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.2	□□□□□ -0.62
POLE-218	ENST00000542362	MTMR14	Q8NCE2	650 aa		11.2	□□□□□ -0.62
POLE-218	ENST00000542362	ANTXR1	Q9H6X2	564 aa		11.2	□□□□□ -0.62
POLE-218	ENST00000542362	PIH1D3	Q9NQM4	214 aa	Known RBP	11.2	□□□□□ -0.62
POLE-218	ENST00000542362	DENND2A	Q9ULE3	1009 aa		11.2	□□□□□ -0.62
POLE-218	ENST00000542362	TLL2	Q9Y6L7	1015 aa		11.2	□□□□□ -0.62
POLE-218	ENST00000542362	RASSF10	A6NK89	507 aa		11.19	□□□□□ -0.62
POLE-218	ENST00000542362	CYP2E1	P05181	493 aa	Predicted RBP	11.19	□□□□□ -0.62
POLE-218	ENST00000542362	SPDYE2	Q495Y8	402 aa		11.19	□□□□□ -0.62
POLE-218	ENST00000542362	SLFNL1	Q499Z3	407 aa		11.19	□□□□□ -0.62
POLE-218	ENST00000542362	GORAB	Q5T7V8	394 aa		11.19	□□□□□ -0.62
POLE-218	ENST00000542362	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.19	□□□□□ -0.62
POLE-218	ENST00000542362	SAPCD2	Q86UD0	394 aa		11.19	□□□□□ -0.62
POLE-218	ENST00000542362	SPATA5	Q8NB90	893 aa		11.19	□□□□□ -0.62
POLE-218	ENST00000542362	WDR66	Q8TBY9	1149 aa		11.19	□□□□□ -0.62
POLE-218	ENST00000542362	TMEM39B	Q9GZU3	492 aa		11.19	□□□□□ -0.62
POLE-218	ENST00000542362	GBA2	Q9HCG7	927 aa	Predicted RBP	11.19	□□□□□ -0.62
POLE-218	ENST00000542362	GPR108	Q9NPR9	543 aa		11.19	□□□□□ -0.62
POLE-218	ENST00000542362	SALL1	Q9NSC2	1324 aa		11.18	□□□□□ -0.62
POLE-218	ENST00000542362	UBE2Q2L	H0YL09	131 aa		11.18	□□□□□ -0.62
POLE-218	ENST00000542362	LDHB	P07195	334 aa	Known RBP	11.18	□□□□□ -0.62
POLE-218	ENST00000542362	MECOM	Q03112	1051 aa		11.18	□□□□□ -0.62
POLE-218	ENST00000542362	NFIA	Q12857	509 aa		11.18	□□□□□ -0.62
POLE-218	ENST00000542362	ADGRA1	Q86SQ6	560 aa		11.18	□□□□□ -0.62
POLE-218	ENST00000542362	ZFPM1	Q8IX07	1006 aa		11.18	□□□□□ -0.62
POLE-218	ENST00000542362	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.18	□□□□□ -0.62
POLE-218	ENST00000542362	TBC1D22A	Q8WUA7	517 aa		11.18	□□□□□ -0.62
POLE-218	ENST00000542362	TEKT1	Q969V4	418 aa		11.18	□□□□□ -0.62
POLE-218	ENST00000542362	DEFB129	Q9H1M3	183 aa		11.18	□□□□□ -0.62
POLE-218	ENST00000542362	GNL3L	Q9NVN8	582 aa	Known RBP	11.18	□□□□□ -0.62
POLE-218	ENST00000542362	SERPINA10	Q9UK55	444 aa		11.18	□□□□□ -0.62
POLE-218	ENST00000542362	RFX7	Q2KHR2	1363 aa		11.17	□□□□□ -0.62
POLE-218	ENST00000542362	HUNK	P57058	714 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms