RNA–Protein interactions for RNA: ENST00000542264.1

ARAP1-215, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, human

TSL 3

Gene ARAP1, Length 271 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARAP1-215	ENST00000542264	LRRC24	Q50LG9	513 aa		13.34	□□□□□ -0.27
ARAP1-215	ENST00000542264	SSH1	Q8WYL5	1049 aa		13.34	□□□□□ -0.27
ARAP1-215	ENST00000542264	HDAC5	Q9UQL6	1122 aa		13.34	□□□□□ -0.27
ARAP1-215	ENST00000542264	TESPA1	A2RU30	521 aa	Predicted RBP	13.33	□□□□□ -0.28
ARAP1-215	ENST00000542264	MAP3K9	P80192	1104 aa		13.33	□□□□□ -0.28
ARAP1-215	ENST00000542264	SLFN5	Q08AF3	891 aa		13.33	□□□□□ -0.28
ARAP1-215	ENST00000542264	ANKRD44	Q8N8A2	993 aa		13.33	□□□□□ -0.28
ARAP1-215	ENST00000542264	TEKT1	Q969V4	418 aa		13.33	□□□□□ -0.28
ARAP1-215	ENST00000542264	HOOK2	Q96ED9	719 aa		13.33	□□□□□ -0.28
ARAP1-215	ENST00000542264	R3HDML	Q9H3Y0	253 aa		13.33	□□□□□ -0.28
ARAP1-215	ENST00000542264	TCP10L2	B9ZVM9	353 aa		13.32	□□□□□ -0.28
ARAP1-215	ENST00000542264	BCAM	P50895	628 aa		13.32	□□□□□ -0.28
ARAP1-215	ENST00000542264	CHAF1A	Q13111	956 aa	Predicted RBP	13.32	□□□□□ -0.28
ARAP1-215	ENST00000542264	ARHGEF6	Q15052	776 aa		13.32	□□□□□ -0.28
ARAP1-215	ENST00000542264	PUM3	Q15397	648 aa	Known RBP	13.32	□□□□□ -0.28
ARAP1-215	ENST00000542264	FKBP1C	Q5VVH2	108 aa		13.32	□□□□□ -0.28
ARAP1-215	ENST00000542264	INTS3	Q68E01	1043 aa	Known RBP	13.32	□□□□□ -0.28
ARAP1-215	ENST00000542264	ERO1A	Q96HE7	468 aa		13.32	□□□□□ -0.28
ARAP1-215	ENST00000542264	TEPSIN	Q96N21	525 aa		13.32	□□□□□ -0.28
ARAP1-215	ENST00000542264	TMOD2	Q9NZR1	351 aa		13.32	□□□□□ -0.28
ARAP1-215	ENST00000542264	AKAP11	Q9UKA4	1901 aa		13.32	□□□□□ -0.28
ARAP1-215	ENST00000542264	AOX1	Q06278	1338 aa		13.32	□□□□□ -0.28
ARAP1-215	ENST00000542264	KIF16B	Q96L93	1317 aa		13.32	□□□□□ -0.28
ARAP1-215	ENST00000542264	EYA2	O00167	538 aa		13.31	□□□□□ -0.28
ARAP1-215	ENST00000542264	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.31	□□□□□ -0.28
ARAP1-215	ENST00000542264	WDHD1	O75717	1129 aa	Predicted RBP	13.31	□□□□□ -0.28
ARAP1-215	ENST00000542264	VGLL2	Q8N8G2	317 aa		13.31	□□□□□ -0.28
ARAP1-215	ENST00000542264	OPTN	Q96CV9	577 aa		13.31	□□□□□ -0.28
ARAP1-215	ENST00000542264	ZDHHC15	Q96MV8	337 aa		13.31	□□□□□ -0.28
ARAP1-215	ENST00000542264	FBXO3	Q9UK99	471 aa		13.31	□□□□□ -0.28
ARAP1-215	ENST00000542264	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.31	□□□□□ -0.28
ARAP1-215	ENST00000542264	TRIM17	Q9Y577	477 aa		13.31	□□□□□ -0.28
ARAP1-215	ENST00000542264	CSAD	Q9Y600	493 aa		13.31	□□□□□ -0.28
ARAP1-215	ENST00000542264	MAST3	O60307	1309 aa		13.31	□□□□□ -0.28
ARAP1-215	ENST00000542264	CT47B1	P0C2W7	299 aa	Predicted RBP	13.3	□□□□□ -0.28
ARAP1-215	ENST00000542264	FGFR2	P21802	821 aa		13.3	□□□□□ -0.28
ARAP1-215	ENST00000542264	GTF2A2	P52657	109 aa		13.3	□□□□□ -0.28
ARAP1-215	ENST00000542264	HHIPL2	Q6UWX4	724 aa		13.3	□□□□□ -0.28
ARAP1-215	ENST00000542264	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.3	□□□□□ -0.28
ARAP1-215	ENST00000542264	FAM83A	Q86UY5	434 aa		13.3	□□□□□ -0.28
ARAP1-215	ENST00000542264	KLHDC4	Q8TBB5	520 aa		13.3	□□□□□ -0.28
ARAP1-215	ENST00000542264	WDR66	Q8TBY9	1149 aa		13.3	□□□□□ -0.28
ARAP1-215	ENST00000542264	LPIN2	Q92539	896 aa		13.3	□□□□□ -0.28
ARAP1-215	ENST00000542264	TMEM39B	Q9GZU3	492 aa		13.3	□□□□□ -0.28
ARAP1-215	ENST00000542264	ELP3	Q9H9T3	547 aa		13.3	□□□□□ -0.28
ARAP1-215	ENST00000542264	SLC5A1	P13866	664 aa		13.29	□□□□□ -0.28
ARAP1-215	ENST00000542264	GJA5	P36382	358 aa		13.29	□□□□□ -0.28
ARAP1-215	ENST00000542264	SP3	Q02447	781 aa		13.29	□□□□□ -0.28
ARAP1-215	ENST00000542264	CRHR2	Q13324	411 aa		13.29	□□□□□ -0.28
ARAP1-215	ENST00000542264	OTOP1	Q7RTM1	612 aa		13.29	□□□□□ -0.28
ARAP1-215	ENST00000542264	MS4A4A	Q96JQ5	239 aa		13.29	□□□□□ -0.28
ARAP1-215	ENST00000542264	PTPN18	Q99952	460 aa		13.29	□□□□□ -0.28
ARAP1-215	ENST00000542264	EFCC1	Q9HA90	598 aa		13.29	□□□□□ -0.28
ARAP1-215	ENST00000542264	SMC4	Q9NTJ3	1288 aa		13.29	□□□□□ -0.28
ARAP1-215	ENST00000542264	GNL3L	Q9NVN8	582 aa	Known RBP	13.29	□□□□□ -0.28
ARAP1-215	ENST00000542264	CEP126	Q9P2H0	1117 aa		13.29	□□□□□ -0.28
ARAP1-215	ENST00000542264	UBTFL1	P0CB47	393 aa	Predicted RBP	13.28	□□□□□ -0.28
ARAP1-215	ENST00000542264	VGLL4	Q14135	290 aa		13.28	□□□□□ -0.28
ARAP1-215	ENST00000542264	GRIK5	Q16478	980 aa		13.28	□□□□□ -0.28
ARAP1-215	ENST00000542264	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.28	□□□□□ -0.28
ARAP1-215	ENST00000542264	TRMT2A	Q8IZ69	625 aa	Known RBP	13.28	□□□□□ -0.28
ARAP1-215	ENST00000542264	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
ARAP1-215	ENST00000542264	ZFYVE28	Q9HCC9	887 aa		13.28	□□□□□ -0.28
ARAP1-215	ENST00000542264	SSC5D	A1L4H1	1573 aa		13.28	□□□□□ -0.28
ARAP1-215	ENST00000542264	CIAO1	O76071	339 aa		13.27	□□□□□ -0.29
ARAP1-215	ENST00000542264	RFX5	P48382	616 aa	Predicted RBP	13.27	□□□□□ -0.29
ARAP1-215	ENST00000542264	DCAF15	Q66K64	600 aa		13.27	□□□□□ -0.29
ARAP1-215	ENST00000542264	ERO1B	Q86YB8	467 aa		13.27	□□□□□ -0.29
ARAP1-215	ENST00000542264	API5	Q9BZZ5	524 aa	Known RBP	13.27	□□□□□ -0.29
ARAP1-215	ENST00000542264	ZCCHC17	Q9NP64	241 aa	Known RBP	13.27	□□□□□ -0.29
ARAP1-215	ENST00000542264	PTPN22	Q9Y2R2	807 aa		13.27	□□□□□ -0.29
ARAP1-215	ENST00000542264	SPEF2	Q9C093	1822 aa		13.27	□□□□□ -0.29
ARAP1-215	ENST00000542264	CCL15-CCL14	A0A0B4J2E2	113 aa		13.26	□□□□□ -0.29
ARAP1-215	ENST00000542264	CETP	P11597	493 aa		13.26	□□□□□ -0.29
ARAP1-215	ENST00000542264	CCL15	Q16663	113 aa		13.26	□□□□□ -0.29
ARAP1-215	ENST00000542264	PRPF38B	Q5VTL8	546 aa	Known RBP	13.26	□□□□□ -0.29
ARAP1-215	ENST00000542264	CDAN1	Q8IWY9	1227 aa		13.26	□□□□□ -0.29
ARAP1-215	ENST00000542264	BRI3BP	Q8WY22	251 aa		13.26	□□□□□ -0.29
ARAP1-215	ENST00000542264	OTUD5	Q96G74	571 aa		13.26	□□□□□ -0.29
ARAP1-215	ENST00000542264	CDCA7L	Q96GN5	454 aa		13.26	□□□□□ -0.29
ARAP1-215	ENST00000542264	NOB1	Q9ULX3	412 aa	Known RBP	13.26	□□□□□ -0.29
ARAP1-215	ENST00000542264	SPDYE5	A6NIY4	337 aa		13.25	□□□□□ -0.29
ARAP1-215	ENST00000542264	SEMA3E	O15041	775 aa		13.25	□□□□□ -0.29
ARAP1-215	ENST00000542264	IL15	P40933	162 aa	Predicted RBP	13.25	□□□□□ -0.29
ARAP1-215	ENST00000542264	CACNB3	P54284	484 aa		13.25	□□□□□ -0.29
ARAP1-215	ENST00000542264	SNAPC2	Q13487	334 aa		13.25	□□□□□ -0.29
ARAP1-215	ENST00000542264	ATP2B3	Q16720	1220 aa		13.25	□□□□□ -0.29
ARAP1-215	ENST00000542264	ATG9A	Q7Z3C6	839 aa		13.25	□□□□□ -0.29
ARAP1-215	ENST00000542264	NBPF11	Q86T75	865 aa		13.25	□□□□□ -0.29
ARAP1-215	ENST00000542264	CD99L2	Q8TCZ2	262 aa		13.25	□□□□□ -0.29
ARAP1-215	ENST00000542264	FAM151A	Q8WW52	585 aa		13.25	□□□□□ -0.29
ARAP1-215	ENST00000542264	WRNIP1	Q96S55	665 aa		13.25	□□□□□ -0.29
ARAP1-215	ENST00000542264	ZNF341	Q9BYN7	854 aa		13.25	□□□□□ -0.29
ARAP1-215	ENST00000542264	ZBTB22	O15209	634 aa		13.24	□□□□□ -0.29
ARAP1-215	ENST00000542264	LDHB	P07195	334 aa	Known RBP	13.24	□□□□□ -0.29
ARAP1-215	ENST00000542264	TAF1C	Q15572	869 aa	Predicted RBP	13.24	□□□□□ -0.29
ARAP1-215	ENST00000542264	CNKSR2	Q8WXI2	1034 aa		13.24	□□□□□ -0.29
ARAP1-215	ENST00000542264	DENND2A	Q9ULE3	1009 aa		13.24	□□□□□ -0.29
ARAP1-215	ENST00000542264	ZNF646	O15015	1829 aa	Predicted RBP	13.23	□□□□□ -0.29
ARAP1-215	ENST00000542264	PPAT	Q06203	517 aa		13.23	□□□□□ -0.29

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