RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 TBC1D9BQ66K14 1250 aa12.72□□□□□ -0.37
NECAP1-206ENST00000542095 NBPF3Q9H094 633 aa12.72□□□□□ -0.37
NECAP1-206ENST00000542095 RRAGDQ9NQL2 400 aaPredicted RBP12.72□□□□□ -0.37
NECAP1-206ENST00000542095 CFAP45Q9UL16 551 aa12.72□□□□□ -0.37
NECAP1-206ENST00000542095 BICDL1Q6ZP65 573 aa12.71□□□□□ -0.37
NECAP1-206ENST00000542095 RNF214Q8ND24 703 aa12.71□□□□□ -0.37
NECAP1-206ENST00000542095 LEO1Q8WVC0 666 aaPredicted RBP12.71□□□□□ -0.37
NECAP1-206ENST00000542095 BSDC1Q9NW68 430 aaPredicted RBP12.71□□□□□ -0.37
NECAP1-206ENST00000542095 TFIP11Q9UBB9 837 aaKnown RBP12.71□□□□□ -0.37
NECAP1-206ENST00000542095 TIAM2Q8IVF5 1701 aa12.71□□□□□ -0.37
NECAP1-206ENST00000542095 CARMIL3Q8ND23 1372 aa12.71□□□□□ -0.37
NECAP1-206ENST00000542095 GOLGA8BA8MQT2 603 aa12.71□□□□□ -0.38
NECAP1-206ENST00000542095 ZPR1O75312 459 aa12.71□□□□□ -0.38
NECAP1-206ENST00000542095 MBD4O95243 580 aa12.71□□□□□ -0.38
NECAP1-206ENST00000542095 GNAT2P19087 354 aa12.71□□□□□ -0.38
NECAP1-206ENST00000542095 UBE4AQ14139 1066 aa12.71□□□□□ -0.38
NECAP1-206ENST00000542095 PTF1AQ7RTS3 328 aa12.71□□□□□ -0.38
NECAP1-206ENST00000542095 TBC1D10CQ8IV04 446 aa12.71□□□□□ -0.38
NECAP1-206ENST00000542095 BCL2L12Q9HB09 334 aa12.71□□□□□ -0.38
NECAP1-206ENST00000542095 GPHNQ9NQX3 736 aaPredicted RBP12.71□□□□□ -0.38
NECAP1-206ENST00000542095 GNL3LQ9NVN8 582 aaKnown RBP12.71□□□□□ -0.38
NECAP1-206ENST00000542095 C3orf67Q6ZVT6 689 aa12.7□□□□□ -0.38
NECAP1-206ENST00000542095 SETDB2Q96T68 719 aa12.7□□□□□ -0.38
NECAP1-206ENST00000542095 NAPBQ9H115 298 aa12.7□□□□□ -0.38
NECAP1-206ENST00000542095 CCNL1Q9UK58 526 aaPredicted RBP12.7□□□□□ -0.38
NECAP1-206ENST00000542095 ZNF804BA4D1E1 1349 aa12.7□□□□□ -0.38
NECAP1-206ENST00000542095 GNPATO15228 680 aa12.7□□□□□ -0.38
NECAP1-206ENST00000542095 ATL3Q6DD88 541 aa12.7□□□□□ -0.38
NECAP1-206ENST00000542095 IFNL3Q8IZI9 196 aa12.7□□□□□ -0.38
NECAP1-206ENST00000542095 PDLIM2Q96JY6 352 aa12.7□□□□□ -0.38
NECAP1-206ENST00000542095 LRP2BPQ9P2M1 347 aa12.7□□□□□ -0.38
NECAP1-206ENST00000542095 ANGEL1Q9UNK9 670 aaKnown RBP12.7□□□□□ -0.38
NECAP1-206ENST00000542095 RTCBQ9Y3I0 505 aaKnown RBP12.7□□□□□ -0.38
NECAP1-206ENST00000542095 PNPLA7Q6ZV29 1317 aa12.69□□□□□ -0.38
NECAP1-206ENST00000542095 ESPNB1AK53 854 aa12.69□□□□□ -0.38
NECAP1-206ENST00000542095 FOSBP53539 338 aa12.69□□□□□ -0.38
NECAP1-206ENST00000542095 UVSSAQ2YD98 709 aa12.69□□□□□ -0.38
NECAP1-206ENST00000542095 TMEM87BQ96K49 555 aa12.69□□□□□ -0.38
NECAP1-206ENST00000542095 NACAP1Q9BZK3 213 aa12.69□□□□□ -0.38
NECAP1-206ENST00000542095 ARMT1Q9H993 441 aa12.69□□□□□ -0.38
NECAP1-206ENST00000542095 HPS5Q9UPZ3 1129 aa12.69□□□□□ -0.38
NECAP1-206ENST00000542095 CPLX1O14810 134 aa12.69□□□□□ -0.38
NECAP1-206ENST00000542095 CAVIN4Q5BKX8 364 aa12.69□□□□□ -0.38
NECAP1-206ENST00000542095 NBPF5PQ86XG9 351 aaPredicted RBP12.69□□□□□ -0.38
NECAP1-206ENST00000542095 ZNF396Q96N95 335 aaPredicted RBP12.69□□□□□ -0.38
NECAP1-206ENST00000542095 NLRP3Q96P20 1036 aa12.69□□□□□ -0.38
NECAP1-206ENST00000542095 EPB41L4AQ9HCS5 686 aaPredicted RBP12.69□□□□□ -0.38
NECAP1-206ENST00000542095 SRP68Q9UHB9 627 aaKnown RBP12.69□□□□□ -0.38
NECAP1-206ENST00000542095 MINPP1Q9UNW1 487 aa12.69□□□□□ -0.38
NECAP1-206ENST00000542095 SH2B2O14492 632 aaPredicted RBP12.68□□□□□ -0.38
NECAP1-206ENST00000542095 FDPSP14324 419 aaKnown RBP12.68□□□□□ -0.38
NECAP1-206ENST00000542095 HS1BP3Q53T59 392 aa12.68□□□□□ -0.38
NECAP1-206ENST00000542095 GIMAP6Q6P9H5 292 aa12.68□□□□□ -0.38
NECAP1-206ENST00000542095 CYB5R4Q7L1T6 521 aa12.68□□□□□ -0.38
NECAP1-206ENST00000542095 NUP62CLQ9H1M0 184 aa12.68□□□□□ -0.38
NECAP1-206ENST00000542095 GSG1L2A8MUP6 293 aa12.67□□□□□ -0.38
NECAP1-206ENST00000542095 B4E1Z4 1266 aa12.67□□□□□ -0.38
NECAP1-206ENST00000542095 LIG1P18858 919 aa12.67□□□□□ -0.38
NECAP1-206ENST00000542095 GYG1P46976 350 aa12.67□□□□□ -0.38
NECAP1-206ENST00000542095 MEX3CQ5U5Q3 659 aaKnown RBP12.67□□□□□ -0.38
NECAP1-206ENST00000542095 SMIM5Q71RC9 77 aa12.67□□□□□ -0.38
NECAP1-206ENST00000542095 VPS37DQ86XT2 251 aa12.67□□□□□ -0.38
NECAP1-206ENST00000542095 FUCA2Q9BTY2 467 aa12.67□□□□□ -0.38
NECAP1-206ENST00000542095 CNNM2Q9H8M5 875 aa12.67□□□□□ -0.38
NECAP1-206ENST00000542095 DDX19AQ9NUU7 478 aaKnown RBP12.67□□□□□ -0.38
NECAP1-206ENST00000542095 SLC4A4Q9Y6R1 1079 aa12.67□□□□□ -0.38
NECAP1-206ENST00000542095 ECM29Q5VYK3 1845 aa12.67□□□□□ -0.38
NECAP1-206ENST00000542095 NEDD4P46934 1319 aa12.67□□□□□ -0.38
NECAP1-206ENST00000542095 CACNA1SQ13698 1873 aa12.67□□□□□ -0.38
NECAP1-206ENST00000542095 TPTE2Q6XPS3 522 aa12.67□□□□□ -0.38
NECAP1-206ENST00000542095 LCORLQ8N3X6 602 aa12.67□□□□□ -0.38
NECAP1-206ENST00000542095 BICD2Q8TD16 824 aa12.67□□□□□ -0.38
NECAP1-206ENST00000542095 CELF1Q92879 486 aaKnown RBP12.67□□□□□ -0.38
NECAP1-206ENST00000542095 C8orf76Q96K31 380 aa12.67□□□□□ -0.38
NECAP1-206ENST00000542095 GJD4Q96KN9 370 aaPredicted RBP12.67□□□□□ -0.38
NECAP1-206ENST00000542095 KRT23Q9C075 422 aa12.67□□□□□ -0.38
NECAP1-206ENST00000542095 ORC3Q9UBD5 711 aaPredicted RBP12.67□□□□□ -0.38
NECAP1-206ENST00000542095 DENND2AQ9ULE3 1009 aa12.67□□□□□ -0.38
NECAP1-206ENST00000542095 CYP7A1P22680 504 aa12.66□□□□□ -0.38
NECAP1-206ENST00000542095 CLCN1P35523 988 aa12.66□□□□□ -0.38
NECAP1-206ENST00000542095 ADD1P35611 737 aaKnown RBP12.66□□□□□ -0.38
NECAP1-206ENST00000542095 TDO2P48775 406 aa12.66□□□□□ -0.38
NECAP1-206ENST00000542095 RPS8P62241 208 aaKnown RBP12.66□□□□□ -0.38
NECAP1-206ENST00000542095 MAP3K11Q16584 847 aa12.66□□□□□ -0.38
NECAP1-206ENST00000542095 RGS22Q8NE09 1264 aa12.66□□□□□ -0.38
NECAP1-206ENST00000542095 ABCF2Q9UG63 623 aa12.66□□□□□ -0.38
NECAP1-206ENST00000542095 IQSEC3Q9UPP2 1182 aaPredicted RBP12.66□□□□□ -0.38
NECAP1-206ENST00000542095 CCDC88AQ3V6T2 1871 aa12.66□□□□□ -0.38
NECAP1-206ENST00000542095 PPFIA3O75145 1194 aa12.66□□□□□ -0.38
NECAP1-206ENST00000542095 CDKL5O76039 1030 aa12.66□□□□□ -0.38
NECAP1-206ENST00000542095 CCDC192P0DO97 292 aa12.66□□□□□ -0.38
NECAP1-206ENST00000542095 METAP2P50579 478 aaKnown RBP eCLIP12.66□□□□□ -0.38
NECAP1-206ENST00000542095 GUCY1B3Q02153 619 aa12.66□□□□□ -0.38
NECAP1-206ENST00000542095 AKNAD1Q5T1N1 836 aa12.66□□□□□ -0.38
NECAP1-206ENST00000542095 FAM182BQ5T319 152 aa12.66□□□□□ -0.38
NECAP1-206ENST00000542095 ARHGEF1Q92888 912 aaKnown RBP12.66□□□□□ -0.38
NECAP1-206ENST00000542095 PGBD1Q96JS3 809 aa12.66□□□□□ -0.38
NECAP1-206ENST00000542095 RAI14Q9P0K7 980 aa12.66□□□□□ -0.38
NECAP1-206ENST00000542095 RCOR1Q9UKL0 485 aa12.66□□□□□ -0.38
NECAP1-206ENST00000542095 COL1A1P02452 1464 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms