RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 ADAM11O75078 769 aa5.51□□□□□ -1.53
USP28-210ENST00000542033 CYP11A1P05108 521 aa5.51□□□□□ -1.53
USP28-210ENST00000542033 H2AFB1P0C5Y9 115 aa5.51□□□□□ -1.53
USP28-210ENST00000542033 H2AFB2P0C5Z0 115 aa5.51□□□□□ -1.53
USP28-210ENST00000542033 ITGAEP38570 1179 aa5.51□□□□□ -1.53
USP28-210ENST00000542033 GSTM4Q03013 218 aa5.51□□□□□ -1.53
USP28-210ENST00000542033 PSMD2Q13200 908 aa5.51□□□□□ -1.53
USP28-210ENST00000542033 UVSSAQ2YD98 709 aa5.51□□□□□ -1.53
USP28-210ENST00000542033 ANKRD34AQ69YU3 496 aa5.51□□□□□ -1.53
USP28-210ENST00000542033 NXPE4Q6UWF7 544 aa5.51□□□□□ -1.53
USP28-210ENST00000542033 DTHD1Q6ZMT9 781 aa5.51□□□□□ -1.53
USP28-210ENST00000542033 Q6ZS46 218 aa5.51□□□□□ -1.53
USP28-210ENST00000542033 RUSC1Q9BVN2 902 aa5.51□□□□□ -1.53
USP28-210ENST00000542033 SSBP4Q9BWG4 385 aaPredicted RBP5.51□□□□□ -1.53
USP28-210ENST00000542033 USP26Q9BXU7 913 aa5.51□□□□□ -1.53
USP28-210ENST00000542033 MRS2Q9HD23 443 aa5.51□□□□□ -1.53
USP28-210ENST00000542033 PARP2Q9UGN5 583 aa5.51□□□□□ -1.53
USP28-210ENST00000542033 SART1O43290 800 aaKnown RBP5.5□□□□□ -1.53
USP28-210ENST00000542033 ALX3O95076 343 aa5.5□□□□□ -1.53
USP28-210ENST00000542033 WISP1O95388 367 aa5.5□□□□□ -1.53
USP28-210ENST00000542033 B3GALT4O96024 378 aa5.5□□□□□ -1.53
USP28-210ENST00000542033 EIF4BP23588 611 aaKnown RBP5.5□□□□□ -1.53
USP28-210ENST00000542033 FCGRTP55899 365 aa5.5□□□□□ -1.53
USP28-210ENST00000542033 FDX2Q6P4F2 183 aa5.5□□□□□ -1.53
USP28-210ENST00000542033 KIAA1211Q6ZU35 1233 aa5.5□□□□□ -1.53
USP28-210ENST00000542033 DZIP1LQ8IYY4 767 aaKnown RBP5.5□□□□□ -1.53
USP28-210ENST00000542033 AGGF1Q8N302 714 aaeCLIP5.5□□□□□ -1.53
USP28-210ENST00000542033 UBASH3BQ8TF42 649 aa5.5□□□□□ -1.53
USP28-210ENST00000542033 MEGF10Q96KG7 1140 aa5.5□□□□□ -1.53
USP28-210ENST00000542033 C12orf49Q9H741 205 aa5.5□□□□□ -1.53
USP28-210ENST00000542033 MEGF11A6BM72 1044 aa5.49□□□□□ -1.53
USP28-210ENST00000542033 GSTT1P30711 240 aa5.49□□□□□ -1.53
USP28-210ENST00000542033 PPP2R3AQ06190 1150 aa5.49□□□□□ -1.53
USP28-210ENST00000542033 AP3B2Q13367 1082 aa5.49□□□□□ -1.53
USP28-210ENST00000542033 RSPO4Q2I0M5 234 aaPredicted RBP5.49□□□□□ -1.53
USP28-210ENST00000542033 ZNF423Q2M1K9 1284 aa5.49□□□□□ -1.53
USP28-210ENST00000542033 NKAPLQ5M9Q1 402 aa5.49□□□□□ -1.53
USP28-210ENST00000542033 NUTM2GQ5VZR2 741 aa5.49□□□□□ -1.53
USP28-210ENST00000542033 GLIS3Q8NEA6 775 aa5.49□□□□□ -1.53
USP28-210ENST00000542033 CORO1BQ9BR76 489 aa5.49□□□□□ -1.53
USP28-210ENST00000542033 OSBPL7Q9BZF2 842 aa5.49□□□□□ -1.53
USP28-210ENST00000542033 CYP4F12Q9HCS2 524 aa5.49□□□□□ -1.53
USP28-210ENST00000542033 FAM8A1Q9UBU6 413 aa5.49□□□□□ -1.53
USP28-210ENST00000542033 AKAP2Q9Y2D5 859 aa5.49□□□□□ -1.53
USP28-210ENST00000542033 LOC100289279A0A1B0GTE1 492 aa5.48□□□□□ -1.53
USP28-210ENST00000542033 DAB2P98082 770 aa5.48□□□□□ -1.53
USP28-210ENST00000542033 TAGLNQ01995 201 aaKnown RBP5.48□□□□□ -1.53
USP28-210ENST00000542033 POU4F3Q15319 338 aa5.48□□□□□ -1.53
USP28-210ENST00000542033 HGSNATQ68CP4 663 aa5.48□□□□□ -1.53
USP28-210ENST00000542033 RGS22Q8NE09 1264 aa5.48□□□□□ -1.53
USP28-210ENST00000542033 SEMA6BQ9H3T3 888 aa5.48□□□□□ -1.53
USP28-210ENST00000542033 AK5Q9Y6K8 562 aa5.48□□□□□ -1.53
USP28-210ENST00000542033 DHX15O43143 795 aaKnown RBP5.47□□□□□ -1.53
USP28-210ENST00000542033 DYRK3O43781 588 aa5.47□□□□□ -1.53
USP28-210ENST00000542033 GAS2O43903 313 aaKnown RBP5.47□□□□□ -1.53
USP28-210ENST00000542033 SORBS3O60504 671 aa5.47□□□□□ -1.53
USP28-210ENST00000542033 USP17L7P0C7H9 530 aa5.47□□□□□ -1.53
USP28-210ENST00000542033 ZNF16P17020 682 aaPredicted RBP5.47□□□□□ -1.53
USP28-210ENST00000542033 EXOSC6Q5RKV6 272 aaKnown RBP5.47□□□□□ -1.53
USP28-210ENST00000542033 TMC4Q7Z404 712 aa5.47□□□□□ -1.53
USP28-210ENST00000542033 UTP4Q969X6 686 aaKnown RBP5.47□□□□□ -1.53
USP28-210ENST00000542033 FAM161BQ96MY7 647 aa5.47□□□□□ -1.53
USP28-210ENST00000542033 PSMG3-AS1Q96PY0 264 aa5.47□□□□□ -1.53
USP28-210ENST00000542033 RNF19AQ9NV58 838 aa5.47□□□□□ -1.53
USP28-210ENST00000542033 VTI1BQ9UEU0 232 aa5.47□□□□□ -1.53
USP28-210ENST00000542033 GPN3Q9UHW5 284 aaPredicted RBP5.47□□□□□ -1.53
USP28-210ENST00000542033 PPM1HQ9ULR3 514 aa5.47□□□□□ -1.53
USP28-210ENST00000542033 HIF3AQ9Y2N7 669 aa5.47□□□□□ -1.53
USP28-210ENST00000542033 RBM47A0AV96 593 aaKnown RBP5.46□□□□□ -1.54
USP28-210ENST00000542033 MAOBP27338 520 aa5.46□□□□□ -1.54
USP28-210ENST00000542033 PRR23CQ6ZRP0 262 aa5.46□□□□□ -1.54
USP28-210ENST00000542033 SMG8Q8ND04 991 aaKnown RBP5.46□□□□□ -1.54
USP28-210ENST00000542033 FAM46AQ96IP4 442 aaKnown RBP5.46□□□□□ -1.54
USP28-210ENST00000542033 TMPRSS13Q9BYE2 586 aa5.46□□□□□ -1.54
USP28-210ENST00000542033 CEP44Q9C0F1 390 aa5.46□□□□□ -1.54
USP28-210ENST00000542033 NRSN2Q9GZP1 204 aa5.46□□□□□ -1.54
USP28-210ENST00000542033 SUGCTQ9HAC7 445 aa5.46□□□□□ -1.54
USP28-210ENST00000542033 TMEM39AQ9NV64 488 aa5.46□□□□□ -1.54
USP28-210ENST00000542033 GSC2O15499 205 aa5.45□□□□□ -1.54
USP28-210ENST00000542033 ZNF157P51786 506 aaPredicted RBP5.45□□□□□ -1.54
USP28-210ENST00000542033 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.45□□□□□ -1.54
USP28-210ENST00000542033 SLC51AQ86UW1 340 aa5.45□□□□□ -1.54
USP28-210ENST00000542033 C12orf50Q8NA57 414 aaPredicted RBP5.45□□□□□ -1.54
USP28-210ENST00000542033 MYRFLQ96LU7 910 aa5.45□□□□□ -1.54
USP28-210ENST00000542033 UBL7Q96S82 380 aaPredicted RBP5.45□□□□□ -1.54
USP28-210ENST00000542033 RAD18Q9NS91 495 aa5.45□□□□□ -1.54
USP28-210ENST00000542033 TTF2Q9UNY4 1162 aaKnown RBP5.45□□□□□ -1.54
USP28-210ENST00000542033 RAXQ9Y2V3 346 aa5.45□□□□□ -1.54
USP28-210ENST00000542033 SAMM50Q9Y512 469 aa5.45□□□□□ -1.54
USP28-210ENST00000542033 PREPP48147 710 aa5.44□□□□□ -1.54
USP28-210ENST00000542033 FAAP100Q0VG06 881 aa5.44□□□□□ -1.54
USP28-210ENST00000542033 PDE3AQ14432 1141 aa5.44□□□□□ -1.54
USP28-210ENST00000542033 TPTE2Q6XPS3 522 aa5.44□□□□□ -1.54
USP28-210ENST00000542033 KRTAP1-3Q8IUG1 177 aa5.44□□□□□ -1.54
USP28-210ENST00000542033 C3orf58Q8NDZ4 430 aa5.44□□□□□ -1.54
USP28-210ENST00000542033 TRIM56Q9BRZ2 755 aaKnown RBP5.44□□□□□ -1.54
USP28-210ENST00000542033 YIPF2Q9BWQ6 316 aa5.44□□□□□ -1.54
USP28-210ENST00000542033 EMILIN2Q9BXX0 1053 aa5.44□□□□□ -1.54
USP28-210ENST00000542033 STOML1Q9UBI4 398 aa5.44□□□□□ -1.54
USP28-210ENST00000542033 TIAF1O95411 115 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms