RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 DHX40Q8IX18 779 aaKnown RBP10.66□□□□□ -0.7
THBS3-211ENST00000541990 CCAR2Q8N163 923 aaKnown RBP10.66□□□□□ -0.7
THBS3-211ENST00000541990 BRF1Q92994 677 aa10.66□□□□□ -0.7
THBS3-211ENST00000541990 PDGFDQ9GZP0 370 aaPredicted RBP10.66□□□□□ -0.7
THBS3-211ENST00000541990 SCAND2PQ9GZW5 306 aaPredicted RBP10.66□□□□□ -0.7
THBS3-211ENST00000541990 NAP1L2Q9ULW6 460 aaPredicted RBP10.66□□□□□ -0.7
THBS3-211ENST00000541990 FPGT-TNNI3KV9GXZ4 949 aa10.66□□□□□ -0.7
THBS3-211ENST00000541990 UBR2Q8IWV8 1755 aa10.66□□□□□ -0.7
THBS3-211ENST00000541990 PCCAP05165 728 aaPredicted RBP10.66□□□□□ -0.7
THBS3-211ENST00000541990 RESTQ13127 1097 aa10.66□□□□□ -0.7
THBS3-211ENST00000541990 IFIT5Q13325 482 aaKnown RBP10.66□□□□□ -0.7
THBS3-211ENST00000541990 PLCD3Q8N3E9 789 aa10.66□□□□□ -0.7
THBS3-211ENST00000541990 AK7Q96M32 723 aa10.66□□□□□ -0.7
THBS3-211ENST00000541990 SEC62Q99442 399 aaKnown RBP10.66□□□□□ -0.7
THBS3-211ENST00000541990 GOLGA6L19H0YKK7 550 aa10.65□□□□□ -0.7
THBS3-211ENST00000541990 ZKSCAN1P17029 563 aaPredicted RBP10.65□□□□□ -0.7
THBS3-211ENST00000541990 RXRBP28702 533 aa10.65□□□□□ -0.7
THBS3-211ENST00000541990 ERO1AQ96HE7 468 aa10.65□□□□□ -0.7
THBS3-211ENST00000541990 LRRC2Q9BYS8 371 aa10.65□□□□□ -0.7
THBS3-211ENST00000541990 CNNM1Q9NRU3 951 aa10.65□□□□□ -0.7
THBS3-211ENST00000541990 RTCBQ9Y3I0 505 aaKnown RBP10.65□□□□□ -0.7
THBS3-211ENST00000541990 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.65□□□□□ -0.7
THBS3-211ENST00000541990 USP42Q9H9J4 1324 aaKnown RBP10.65□□□□□ -0.7
THBS3-211ENST00000541990 SLU7O95391 586 aaKnown RBP10.65□□□□□ -0.7
THBS3-211ENST00000541990 CDC25BP30305 580 aa10.65□□□□□ -0.7
THBS3-211ENST00000541990 CTSWP56202 376 aa10.65□□□□□ -0.7
THBS3-211ENST00000541990 SCARF1Q14162 830 aa10.65□□□□□ -0.7
THBS3-211ENST00000541990 CCDC129Q6ZRS4 1044 aa10.65□□□□□ -0.7
THBS3-211ENST00000541990 MAP4K1Q92918 833 aa10.65□□□□□ -0.7
THBS3-211ENST00000541990 UTP14AQ9BVJ6 771 aaKnown RBP10.65□□□□□ -0.7
THBS3-211ENST00000541990 COPRSQ9NQ92 184 aa10.65□□□□□ -0.7
THBS3-211ENST00000541990 ECHDC1Q9NTX5 307 aa10.65□□□□□ -0.7
THBS3-211ENST00000541990 JAG2Q9Y219 1238 aa10.65□□□□□ -0.7
THBS3-211ENST00000541990 ARFGEF2Q9Y6D5 1785 aa10.65□□□□□ -0.71
THBS3-211ENST00000541990 ZPR1O75312 459 aa10.64□□□□□ -0.71
THBS3-211ENST00000541990 RPS6KB1P23443 525 aa10.64□□□□□ -0.71
THBS3-211ENST00000541990 RFC4P35249 363 aa10.64□□□□□ -0.71
THBS3-211ENST00000541990 E4F1Q66K89 784 aaPredicted RBP10.64□□□□□ -0.71
THBS3-211ENST00000541990 BLOC1S2Q6QNY1 142 aa10.64□□□□□ -0.71
THBS3-211ENST00000541990 NBPF11Q86T75 865 aa10.64□□□□□ -0.71
THBS3-211ENST00000541990 FHOD1Q9Y613 1164 aa10.64□□□□□ -0.71
THBS3-211ENST00000541990 A0A1B0GUL7 405 aa10.64□□□□□ -0.71
THBS3-211ENST00000541990 EYA2O00167 538 aa10.64□□□□□ -0.71
THBS3-211ENST00000541990 CLCN6P51797 869 aa10.64□□□□□ -0.71
THBS3-211ENST00000541990 FKBP4Q02790 459 aaKnown RBP eCLIP10.64□□□□□ -0.71
THBS3-211ENST00000541990 TXNRD1Q16881 649 aa10.64□□□□□ -0.71
THBS3-211ENST00000541990 GORABQ5T7V8 394 aa10.64□□□□□ -0.71
THBS3-211ENST00000541990 SARM1Q6SZW1 724 aa10.64□□□□□ -0.71
THBS3-211ENST00000541990 SYT10Q6XYQ8 523 aa10.64□□□□□ -0.71
THBS3-211ENST00000541990 DEFB132Q7Z7B7 95 aa10.64□□□□□ -0.71
THBS3-211ENST00000541990 AOPEPQ8N6M6 819 aa10.64□□□□□ -0.71
THBS3-211ENST00000541990 RUFY2Q8WXA3 655 aa10.64□□□□□ -0.71
THBS3-211ENST00000541990 MRFAP1L1Q96HT8 127 aa10.64□□□□□ -0.71
THBS3-211ENST00000541990 TIGD1Q96MW7 591 aa10.64□□□□□ -0.71
THBS3-211ENST00000541990 TTC41PQ6P2S7 1318 aa10.64□□□□□ -0.71
THBS3-211ENST00000541990 EN1Q05925 392 aaPredicted RBP10.64□□□□□ -0.71
THBS3-211ENST00000541990 ZNF827Q17R98 1081 aa10.64□□□□□ -0.71
THBS3-211ENST00000541990 METTL24Q5JXM2 366 aa10.64□□□□□ -0.71
THBS3-211ENST00000541990 EPC1Q9H2F5 836 aa10.64□□□□□ -0.71
THBS3-211ENST00000541990 PAPPAQ13219 1627 aa10.63□□□□□ -0.71
THBS3-211ENST00000541990 SH3TC1Q8TE82 1336 aa10.63□□□□□ -0.71
THBS3-211ENST00000541990 NWD2Q9ULI1 1742 aa10.63□□□□□ -0.71
THBS3-211ENST00000541990 FANCGO15287 622 aa10.63□□□□□ -0.71
THBS3-211ENST00000541990 NTSR2O95665 410 aa10.63□□□□□ -0.71
THBS3-211ENST00000541990 H2AFXP16104 143 aaPredicted RBP10.63□□□□□ -0.71
THBS3-211ENST00000541990 PDCP20941 246 aa10.63□□□□□ -0.71
THBS3-211ENST00000541990 CDK11BP21127 795 aaKnown RBP10.63□□□□□ -0.71
THBS3-211ENST00000541990 PLA2G4AP47712 749 aa10.63□□□□□ -0.71
THBS3-211ENST00000541990 HNRNPH2P55795 449 aaKnown RBP10.63□□□□□ -0.71
THBS3-211ENST00000541990 KLHL34Q8N239 644 aa10.63□□□□□ -0.71
THBS3-211ENST00000541990 GPR101Q96P66 508 aaPredicted RBP10.63□□□□□ -0.71
THBS3-211ENST00000541990 CCDC66A2RUB6 948 aa10.63□□□□□ -0.71
THBS3-211ENST00000541990 GOLIM4O00461 696 aa10.63□□□□□ -0.71
THBS3-211ENST00000541990 RPS6KA4O75676 772 aa10.63□□□□□ -0.71
THBS3-211ENST00000541990 ADD1P35611 737 aaKnown RBP10.63□□□□□ -0.71
THBS3-211ENST00000541990 PTPN21Q16825 1174 aa10.63□□□□□ -0.71
THBS3-211ENST00000541990 TRAPPC3LQ5T215 181 aa10.63□□□□□ -0.71
THBS3-211ENST00000541990 NBPF5PQ86XG9 351 aaPredicted RBP10.63□□□□□ -0.71
THBS3-211ENST00000541990 CCAR1Q8IX12 1150 aaKnown RBP10.63□□□□□ -0.71
THBS3-211ENST00000541990 NEK11Q8NG66 645 aa10.63□□□□□ -0.71
THBS3-211ENST00000541990 TFCP2L1Q9NZI6 479 aa10.63□□□□□ -0.71
THBS3-211ENST00000541990 PLEKHG2Q9H7P9 1386 aa10.63□□□□□ -0.71
THBS3-211ENST00000541990 AFDNP55196 1824 aaKnown RBP10.63□□□□□ -0.71
THBS3-211ENST00000541990 BECN2A8MW95 431 aa10.62□□□□□ -0.71
THBS3-211ENST00000541990 SEC31AO94979 1220 aaKnown RBP10.62□□□□□ -0.71
THBS3-211ENST00000541990 SNW1Q13573 536 aaKnown RBP10.62□□□□□ -0.71
THBS3-211ENST00000541990 HSP90AB4PQ58FF6 505 aa10.62□□□□□ -0.71
THBS3-211ENST00000541990 CELF1Q92879 486 aaKnown RBP10.62□□□□□ -0.71
THBS3-211ENST00000541990 ZBTB9Q96C00 473 aa10.62□□□□□ -0.71
THBS3-211ENST00000541990 PPP1R13BQ96KQ4 1090 aa10.62□□□□□ -0.71
THBS3-211ENST00000541990 NOL10Q9BSC4 688 aaKnown RBP10.62□□□□□ -0.71
THBS3-211ENST00000541990 ERVV-1B6SEH8 477 aa10.62□□□□□ -0.71
THBS3-211ENST00000541990 TRIM28Q13263 835 aaKnown RBP10.62□□□□□ -0.71
THBS3-211ENST00000541990 STX1AQ16623 288 aa10.62□□□□□ -0.71
THBS3-211ENST00000541990 ARMCX5Q6P1M9 558 aa10.62□□□□□ -0.71
THBS3-211ENST00000541990 SETDB2Q96T68 719 aa10.62□□□□□ -0.71
THBS3-211ENST00000541990 FSD1Q9BTV5 496 aa10.62□□□□□ -0.71
THBS3-211ENST00000541990 CEP126Q9P2H0 1117 aa10.62□□□□□ -0.71
THBS3-211ENST00000541990 ABCC12Q96J65 1359 aa10.62□□□□□ -0.71
THBS3-211ENST00000541990 TJP1Q07157 1748 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms