RNA–Protein interactions for RNA: ENST00000541371.5

PRPF19-206, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 3

Gene PRPF19, Length 943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-206ENST00000541371 TNNI2P48788 182 aa16.61■□□□□ 0.25
PRPF19-206ENST00000541371 ANKRD44Q8N8A2 993 aa16.61■□□□□ 0.25
PRPF19-206ENST00000541371 TBC1D22AQ8WUA7 517 aa16.61■□□□□ 0.25
PRPF19-206ENST00000541371 TCP10L2B9ZVM9 353 aa16.6■□□□□ 0.25
PRPF19-206ENST00000541371 IGF2BP3O00425 579 aaKnown RBP eCLIP16.6■□□□□ 0.25
PRPF19-206ENST00000541371 PDE8BO95263 885 aa16.6■□□□□ 0.25
PRPF19-206ENST00000541371 SSH1Q8WYL5 1049 aa16.6■□□□□ 0.25
PRPF19-206ENST00000541371 KLHDC4Q8TBB5 520 aa16.59■□□□□ 0.25
PRPF19-206ENST00000541371 USP44Q9H0E7 712 aa16.59■□□□□ 0.25
PRPF19-206ENST00000541371 ELP3Q9H9T3 547 aa16.59■□□□□ 0.25
PRPF19-206ENST00000541371 IFIT1P09914 478 aaKnown RBP16.58■□□□□ 0.24
PRPF19-206ENST00000541371 GJA5P36382 358 aa16.58■□□□□ 0.24
PRPF19-206ENST00000541371 BCAMP50895 628 aa16.58■□□□□ 0.24
PRPF19-206ENST00000541371 HDLBPQ00341 1268 aaKnown RBP16.58■□□□□ 0.24
PRPF19-206ENST00000541371 GRIK5Q16478 980 aa16.58■□□□□ 0.24
PRPF19-206ENST00000541371 VGLL2Q8N8G2 317 aa16.58■□□□□ 0.24
PRPF19-206ENST00000541371 TEKT1Q969V4 418 aa16.58■□□□□ 0.24
PRPF19-206ENST00000541371 OPTNQ96CV9 577 aa16.58■□□□□ 0.24
PRPF19-206ENST00000541371 TEPSINQ96N21 525 aa16.58■□□□□ 0.24
PRPF19-206ENST00000541371 TMEM39BQ9GZU3 492 aa16.58■□□□□ 0.24
PRPF19-206ENST00000541371 TRIM17Q9Y577 477 aa16.58■□□□□ 0.24
PRPF19-206ENST00000541371 SLFN5Q08AF3 891 aa16.57■□□□□ 0.24
PRPF19-206ENST00000541371 PUM3Q15397 648 aaKnown RBP16.57■□□□□ 0.24
PRPF19-206ENST00000541371 CDAN1Q8IWY9 1227 aa16.57■□□□□ 0.24
PRPF19-206ENST00000541371 TMOD2Q9NZR1 351 aa16.57■□□□□ 0.24
PRPF19-206ENST00000541371 TESPA1A2RU30 521 aaPredicted RBP16.56■□□□□ 0.24
PRPF19-206ENST00000541371 MAP3K9P80192 1104 aa16.56■□□□□ 0.24
PRPF19-206ENST00000541371 CRHR2Q13324 411 aa16.56■□□□□ 0.24
PRPF19-206ENST00000541371 ALDH1L2Q3SY69 923 aa16.56■□□□□ 0.24
PRPF19-206ENST00000541371 ERO1AQ96HE7 468 aa16.56■□□□□ 0.24
PRPF19-206ENST00000541371 CSADQ9Y600 493 aa16.56■□□□□ 0.24
PRPF19-206ENST00000541371 MAST3O60307 1309 aa16.55■□□□□ 0.24
PRPF19-206ENST00000541371 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.55■□□□□ 0.24
PRPF19-206ENST00000541371 OTOP1Q7RTM1 612 aa16.55■□□□□ 0.24
PRPF19-206ENST00000541371 PTPN18Q99952 460 aa16.55■□□□□ 0.24
PRPF19-206ENST00000541371 MRIQ9BWK5 157 aa16.55■□□□□ 0.24
PRPF19-206ENST00000541371 SMC4Q9NTJ3 1288 aa16.55■□□□□ 0.24
PRPF19-206ENST00000541371 SUGT1Q9Y2Z0 365 aa16.55■□□□□ 0.24
PRPF19-206ENST00000541371 KIF16BQ96L93 1317 aa16.54■□□□□ 0.24
PRPF19-206ENST00000541371 EYA2O00167 538 aa16.54■□□□□ 0.24
PRPF19-206ENST00000541371 SLC5A1P13866 664 aa16.54■□□□□ 0.24
PRPF19-206ENST00000541371 FGFR2P21802 821 aa16.54■□□□□ 0.24
PRPF19-206ENST00000541371 CACNB3P54284 484 aa16.54■□□□□ 0.24
PRPF19-206ENST00000541371 VGLL4Q14135 290 aa16.54■□□□□ 0.24
PRPF19-206ENST00000541371 ZDHHC15Q96MV8 337 aa16.54■□□□□ 0.24
PRPF19-206ENST00000541371 GTF2A2P52657 109 aa16.53■□□□□ 0.24
PRPF19-206ENST00000541371 SP3Q02447 781 aa16.53■□□□□ 0.24
PRPF19-206ENST00000541371 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.53■□□□□ 0.24
PRPF19-206ENST00000541371 CD99L2Q8TCZ2 262 aa16.53■□□□□ 0.24
PRPF19-206ENST00000541371 CNKSR2Q8WXI2 1034 aa16.53■□□□□ 0.24
PRPF19-206ENST00000541371 LPIN2Q92539 896 aa16.53■□□□□ 0.24
PRPF19-206ENST00000541371 HOOK2Q96ED9 719 aa16.53■□□□□ 0.24
PRPF19-206ENST00000541371 CDCA7LQ96GN5 454 aa16.53■□□□□ 0.24
PRPF19-206ENST00000541371 MS4A4AQ96JQ5 239 aa16.53■□□□□ 0.24
PRPF19-206ENST00000541371 ARAP2Q8WZ64 1704 aa16.53■□□□□ 0.24
PRPF19-206ENST00000541371 CCL15-CCL14A0A0B4J2E2 113 aa16.52■□□□□ 0.24
PRPF19-206ENST00000541371 UBTFL1P0CB47 393 aaPredicted RBP16.52■□□□□ 0.24
PRPF19-206ENST00000541371 RFX5P48382 616 aaPredicted RBP16.52■□□□□ 0.24
PRPF19-206ENST00000541371 CCL15Q16663 113 aa16.52■□□□□ 0.24
PRPF19-206ENST00000541371 APOBEC3HQ6NTF7 200 aaKnown RBP16.52■□□□□ 0.24
PRPF19-206ENST00000541371 HHIPL2Q6UWX4 724 aa16.52■□□□□ 0.24
PRPF19-206ENST00000541371 FAM83AQ86UY5 434 aa16.52■□□□□ 0.24
PRPF19-206ENST00000541371 WDR66Q8TBY9 1149 aa16.52■□□□□ 0.24
PRPF19-206ENST00000541371 BRI3BPQ8WY22 251 aa16.52■□□□□ 0.24
PRPF19-206ENST00000541371 OTUD5Q96G74 571 aa16.52■□□□□ 0.24
PRPF19-206ENST00000541371 EFCC1Q9HA90 598 aa16.52■□□□□ 0.24
PRPF19-206ENST00000541371 TAF1CQ15572 869 aaPredicted RBP16.51■□□□□ 0.23
PRPF19-206ENST00000541371 PRPF38BQ5VTL8 546 aaKnown RBP16.51■□□□□ 0.23
PRPF19-206ENST00000541371 FKBP1CQ5VVH2 108 aa16.51■□□□□ 0.23
PRPF19-206ENST00000541371 INTS3Q68E01 1043 aaKnown RBP16.51■□□□□ 0.23
PRPF19-206ENST00000541371 WRNIP1Q96S55 665 aa16.51■□□□□ 0.23
PRPF19-206ENST00000541371 ZFYVE28Q9HCC9 887 aa16.51■□□□□ 0.23
PRPF19-206ENST00000541371 PTPN22Q9Y2R2 807 aa16.51■□□□□ 0.23
PRPF19-206ENST00000541371 PDE4DIPQ5VU43 2346 aa16.5■□□□□ 0.23
PRPF19-206ENST00000541371 WDHD1O75717 1129 aaPredicted RBP16.5■□□□□ 0.23
PRPF19-206ENST00000541371 ARHGEF6Q15052 776 aa16.5■□□□□ 0.23
PRPF19-206ENST00000541371 DCAF15Q66K64 600 aa16.5■□□□□ 0.23
PRPF19-206ENST00000541371 SIL1Q9H173 461 aa16.5■□□□□ 0.23
PRPF19-206ENST00000541371 GNL3LQ9NVN8 582 aaKnown RBP16.5■□□□□ 0.23
PRPF19-206ENST00000541371 CEP126Q9P2H0 1117 aa16.5■□□□□ 0.23
PRPF19-206ENST00000541371 FBXO3Q9UK99 471 aa16.5■□□□□ 0.23
PRPF19-206ENST00000541371 HDAC5Q9UQL6 1122 aa16.5■□□□□ 0.23
PRPF19-206ENST00000541371 LAMB1P07942 1786 aa16.49■□□□□ 0.23
PRPF19-206ENST00000541371 SPDYE5A6NIY4 337 aa16.49■□□□□ 0.23
PRPF19-206ENST00000541371 CT47B1P0C2W7 299 aaPredicted RBP16.49■□□□□ 0.23
PRPF19-206ENST00000541371 ATG9AQ7Z3C6 839 aa16.49■□□□□ 0.23
PRPF19-206ENST00000541371 ERO1BQ86YB8 467 aa16.49■□□□□ 0.23
PRPF19-206ENST00000541371 NOB1Q9ULX3 412 aaKnown RBP16.49■□□□□ 0.23
PRPF19-206ENST00000541371 SNCAIPQ9Y6H5 919 aa16.49■□□□□ 0.23
PRPF19-206ENST00000541371 OTOFQ9HC10 1997 aa16.49■□□□□ 0.23
PRPF19-206ENST00000541371 CIAO1O76071 339 aa16.48■□□□□ 0.23
PRPF19-206ENST00000541371 CETPP11597 493 aa16.48■□□□□ 0.23
PRPF19-206ENST00000541371 ATP2B3Q16720 1220 aa16.48■□□□□ 0.23
PRPF19-206ENST00000541371 TRMT2AQ8IZ69 625 aaKnown RBP16.48■□□□□ 0.23
PRPF19-206ENST00000541371 FAM43AQ8N2R8 423 aa16.48■□□□□ 0.23
PRPF19-206ENST00000541371 ZKSCAN4Q969J2 545 aaPredicted RBP16.48■□□□□ 0.23
PRPF19-206ENST00000541371 ZNF341Q9BYN7 854 aa16.48■□□□□ 0.23
PRPF19-206ENST00000541371 API5Q9BZZ5 524 aaKnown RBP16.48■□□□□ 0.23
PRPF19-206ENST00000541371 SNAPC2Q13487 334 aa16.47■□□□□ 0.23
PRPF19-206ENST00000541371 MIGA2Q7L4E1 593 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms