RNA–Protein interactions for RNA: ENST00000541168.1

SMCO2-205, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 3

Gene SMCO2, Length 922 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-205ENST00000541168 CBLL1Q75N03 491 aa10.39□□□□□ -0.75
SMCO2-205ENST00000541168 ZAR1Q86SH2 424 aa10.39□□□□□ -0.75
SMCO2-205ENST00000541168 TP53INP2Q8IXH6 220 aa10.39□□□□□ -0.75
SMCO2-205ENST00000541168 CCDC97Q96F63 343 aaPredicted RBP10.39□□□□□ -0.75
SMCO2-205ENST00000541168 LATS2Q9NRM7 1088 aa10.39□□□□□ -0.75
SMCO2-205ENST00000541168 PRKAG2Q9UGJ0 569 aa10.39□□□□□ -0.75
SMCO2-205ENST00000541168 SOX4Q06945 474 aaPredicted RBP10.38□□□□□ -0.75
SMCO2-205ENST00000541168 MTMR3Q13615 1198 aa10.38□□□□□ -0.75
SMCO2-205ENST00000541168 EZH1Q92800 747 aaPredicted RBP10.38□□□□□ -0.75
SMCO2-205ENST00000541168 BSDC1Q9NW68 430 aaPredicted RBP10.38□□□□□ -0.75
SMCO2-205ENST00000541168 EIF4EBP3O60516 100 aaPredicted RBP10.37□□□□□ -0.75
SMCO2-205ENST00000541168 ADH5P11766 374 aa10.37□□□□□ -0.75
SMCO2-205ENST00000541168 EHHADHQ08426 723 aa10.37□□□□□ -0.75
SMCO2-205ENST00000541168 PEAR1Q5VY43 1037 aaPredicted RBP10.37□□□□□ -0.75
SMCO2-205ENST00000541168 NRSN2Q9GZP1 204 aa10.37□□□□□ -0.75
SMCO2-205ENST00000541168 AMOTL2Q9Y2J4 779 aa10.37□□□□□ -0.75
SMCO2-205ENST00000541168 METTL12A8MUP2 240 aa10.36□□□□□ -0.75
SMCO2-205ENST00000541168 AAMPQ13685 434 aa10.36□□□□□ -0.75
SMCO2-205ENST00000541168 OGFOD2Q6N063 350 aa10.36□□□□□ -0.75
SMCO2-205ENST00000541168 FAM170BA6NMN3 283 aa10.35□□□□□ -0.75
SMCO2-205ENST00000541168 USP5P45974 858 aa10.35□□□□□ -0.75
SMCO2-205ENST00000541168 FLCNQ8NFG4 579 aa10.34□□□□□ -0.75
SMCO2-205ENST00000541168 GATA6Q92908 595 aa10.34□□□□□ -0.75
SMCO2-205ENST00000541168 ASIC4Q96FT7 647 aa10.34□□□□□ -0.75
SMCO2-205ENST00000541168 ACTL7BQ9Y614 415 aa10.34□□□□□ -0.75
SMCO2-205ENST00000541168 NCAPD3P42695 1498 aa10.34□□□□□ -0.75
SMCO2-205ENST00000541168 SMARCA4P51532 1647 aa10.33□□□□□ -0.76
SMCO2-205ENST00000541168 NPR3P17342 541 aa10.33□□□□□ -0.76
SMCO2-205ENST00000541168 RAB6AP20340 208 aa10.33□□□□□ -0.76
SMCO2-205ENST00000541168 SERPINA10Q9UK55 444 aa10.33□□□□□ -0.76
SMCO2-205ENST00000541168 ATAD2BQ9ULI0 1458 aa10.32□□□□□ -0.76
SMCO2-205ENST00000541168 ITGB5P18084 799 aa10.32□□□□□ -0.76
SMCO2-205ENST00000541168 PCDH1Q08174 1060 aa10.32□□□□□ -0.76
SMCO2-205ENST00000541168 COL19A1Q14993 1142 aa10.32□□□□□ -0.76
SMCO2-205ENST00000541168 AGBL5Q8NDL9 886 aa10.32□□□□□ -0.76
SMCO2-205ENST00000541168 SMARCA2P51531 1590 aa10.31□□□□□ -0.76
SMCO2-205ENST00000541168 FAM13AO94988 1023 aa10.31□□□□□ -0.76
SMCO2-205ENST00000541168 MAOBP27338 520 aa10.31□□□□□ -0.76
SMCO2-205ENST00000541168 MAP7Q14244 749 aa10.31□□□□□ -0.76
SMCO2-205ENST00000541168 LCE1DQ5T752 114 aa10.31□□□□□ -0.76
SMCO2-205ENST00000541168 CLEC4MQ9H2X3 399 aaPredicted RBP10.31□□□□□ -0.76
SMCO2-205ENST00000541168 HMGXB3Q12766 1538 aa10.31□□□□□ -0.76
SMCO2-205ENST00000541168 BAZ1AQ9NRL2 1556 aaPredicted RBP10.31□□□□□ -0.76
SMCO2-205ENST00000541168 FZD6O60353 706 aa10.3□□□□□ -0.76
SMCO2-205ENST00000541168 CTSBP07858 339 aa10.3□□□□□ -0.76
SMCO2-205ENST00000541168 NFICP08651 508 aa10.3□□□□□ -0.76
SMCO2-205ENST00000541168 JUNBP17275 347 aaPredicted RBP10.3□□□□□ -0.76
SMCO2-205ENST00000541168 SSFA2P28290 1259 aa10.3□□□□□ -0.76
SMCO2-205ENST00000541168 JAG1P78504 1218 aa10.3□□□□□ -0.76
SMCO2-205ENST00000541168 CYP27A1Q02318 531 aa10.3□□□□□ -0.76
SMCO2-205ENST00000541168 HP1BP3Q5SSJ5 553 aaPredicted RBP10.3□□□□□ -0.76
SMCO2-205ENST00000541168 DUSP27Q5VZP5 1158 aa10.3□□□□□ -0.76
SMCO2-205ENST00000541168 ZFYVE28Q9HCC9 887 aa10.3□□□□□ -0.76
SMCO2-205ENST00000541168 LRRC4CQ9HCJ2 640 aa10.3□□□□□ -0.76
SMCO2-205ENST00000541168 PAK6Q9NQU5 681 aaPredicted RBP10.3□□□□□ -0.76
SMCO2-205ENST00000541168 A0A096LPE4 126 aa10.29□□□□□ -0.76
SMCO2-205ENST00000541168 A0A1W2PPZ6 126 aa10.29□□□□□ -0.76
SMCO2-205ENST00000541168 CYP11A1P05108 521 aa10.29□□□□□ -0.76
SMCO2-205ENST00000541168 POLR3DP05423 398 aaPredicted RBP10.29□□□□□ -0.76
SMCO2-205ENST00000541168 ZNF765Q7L2R6 523 aa10.29□□□□□ -0.76
SMCO2-205ENST00000541168 GJD3Q8N144 294 aa10.29□□□□□ -0.76
SMCO2-205ENST00000541168 POU5F2Q8N7G0 328 aa10.29□□□□□ -0.76
SMCO2-205ENST00000541168 SEMA6CQ9H3T2 930 aa10.29□□□□□ -0.76
SMCO2-205ENST00000541168 ZC3H7BQ9UGR2 993 aaKnown RBP10.29□□□□□ -0.76
SMCO2-205ENST00000541168 POU4F3Q15319 338 aa10.28□□□□□ -0.76
SMCO2-205ENST00000541168 ZNF423Q2M1K9 1284 aa10.28□□□□□ -0.76
SMCO2-205ENST00000541168 AKAP4Q5JQC9 854 aa10.28□□□□□ -0.76
SMCO2-205ENST00000541168 DYMQ7RTS9 669 aa10.28□□□□□ -0.76
SMCO2-205ENST00000541168 CCNJLQ8IV13 435 aa10.28□□□□□ -0.76
SMCO2-205ENST00000541168 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.27□□□□□ -0.77
SMCO2-205ENST00000541168 ACSS3Q9H6R3 686 aa10.27□□□□□ -0.77
SMCO2-205ENST00000541168 FAM105AQ9NUU6 356 aa10.27□□□□□ -0.77
SMCO2-205ENST00000541168 AP4E1Q9UPM8 1137 aa10.27□□□□□ -0.77
SMCO2-205ENST00000541168 A0A1W2PP55 124 aa10.26□□□□□ -0.77
SMCO2-205ENST00000541168 TMEM88BA6NKF7 163 aa10.26□□□□□ -0.77
SMCO2-205ENST00000541168 C8AP07357 584 aa10.26□□□□□ -0.77
SMCO2-205ENST00000541168 GRIA4P48058 902 aa10.26□□□□□ -0.77
SMCO2-205ENST00000541168 SF3B2Q13435 895 aaKnown RBP10.26□□□□□ -0.77
SMCO2-205ENST00000541168 SPRED3Q2MJR0 410 aa10.26□□□□□ -0.77
SMCO2-205ENST00000541168 LIN7BQ9HAP6 207 aa10.26□□□□□ -0.77
SMCO2-205ENST00000541168 ZFYVE1Q9HBF4 777 aa10.26□□□□□ -0.77
SMCO2-205ENST00000541168 CCDC87Q9NVE4 849 aa10.26□□□□□ -0.77
SMCO2-205ENST00000541168 TCF12Q99081 682 aa10.25□□□□□ -0.77
SMCO2-205ENST00000541168 RAD18Q9NS91 495 aa10.25□□□□□ -0.77
SMCO2-205ENST00000541168 MTMR7Q9Y216 660 aa10.25□□□□□ -0.77
SMCO2-205ENST00000541168 BAZ1BQ9UIG0 1483 aaKnown RBP10.24□□□□□ -0.77
SMCO2-205ENST00000541168 PEG3Q9GZU2 1588 aa10.24□□□□□ -0.77
SMCO2-205ENST00000541168 GALNT12Q8IXK2 581 aa10.24□□□□□ -0.77
SMCO2-205ENST00000541168 CORO1BQ9BR76 489 aa10.24□□□□□ -0.77
SMCO2-205ENST00000541168 TRIM56Q9BRZ2 755 aaKnown RBP10.24□□□□□ -0.77
SMCO2-205ENST00000541168 KRTAP4-7Q9BYR0 210 aa10.24□□□□□ -0.77
SMCO2-205ENST00000541168 ASPAP45381 313 aa10.23□□□□□ -0.77
SMCO2-205ENST00000541168 FKBP4Q02790 459 aaKnown RBP eCLIP10.23□□□□□ -0.77
SMCO2-205ENST00000541168 GSX1Q9H4S2 264 aaPredicted RBP10.23□□□□□ -0.77
SMCO2-205ENST00000541168 ECEL1O95672 775 aa10.22□□□□□ -0.77
SMCO2-205ENST00000541168 SEZ6L2Q6UXD5 910 aa10.22□□□□□ -0.77
SMCO2-205ENST00000541168 DDX54Q8TDD1 881 aaKnown RBP10.22□□□□□ -0.77
SMCO2-205ENST00000541168 C1GALT1Q9NS00 363 aa10.22□□□□□ -0.77
SMCO2-205ENST00000541168 SLC5A6Q9Y289 635 aa10.22□□□□□ -0.77
SMCO2-205ENST00000541168 DAGLAQ9Y4D2 1042 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms