RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 DNM2P50570 870 aa11.25□□□□□ -0.61
TRERF1-205ENST00000541110 NAP1L4Q99733 375 aaKnown RBP11.25□□□□□ -0.61
TRERF1-205ENST00000541110 PARP1P09874 1014 aaKnown RBP11.25□□□□□ -0.61
TRERF1-205ENST00000541110 MAN1A1P33908 653 aa11.25□□□□□ -0.61
TRERF1-205ENST00000541110 NME9Q86XW9 330 aa11.25□□□□□ -0.61
TRERF1-205ENST00000541110 FMNL3Q8IVF7 1028 aa11.25□□□□□ -0.61
TRERF1-205ENST00000541110 GBP7Q8N8V2 638 aaPredicted RBP11.25□□□□□ -0.61
TRERF1-205ENST00000541110 AKNAQ7Z591 1439 aa11.24□□□□□ -0.61
TRERF1-205ENST00000541110 FGD5Q6ZNL6 1462 aa11.24□□□□□ -0.61
TRERF1-205ENST00000541110 VIMP08670 466 aaKnown RBP11.24□□□□□ -0.61
TRERF1-205ENST00000541110 DTHD1Q6ZMT9 781 aa11.24□□□□□ -0.61
TRERF1-205ENST00000541110 ANKRD13DQ6ZTN6 518 aa11.24□□□□□ -0.61
TRERF1-205ENST00000541110 MTUS1Q9ULD2 1270 aa11.24□□□□□ -0.61
TRERF1-205ENST00000541110 WDR7Q9Y4E6 1490 aa11.24□□□□□ -0.61
TRERF1-205ENST00000541110 CCNT1O60563 726 aaKnown RBP11.24□□□□□ -0.61
TRERF1-205ENST00000541110 GNPATO15228 680 aa11.24□□□□□ -0.61
TRERF1-205ENST00000541110 RAB3IPQ96QF0 476 aaPredicted RBP11.24□□□□□ -0.61
TRERF1-205ENST00000541110 DDX19AQ9NUU7 478 aaKnown RBP11.24□□□□□ -0.61
TRERF1-205ENST00000541110 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.24□□□□□ -0.61
TRERF1-205ENST00000541110 STIM2Q9P246 746 aa11.24□□□□□ -0.61
TRERF1-205ENST00000541110 BICDL2A1A5D9 508 aa11.24□□□□□ -0.61
TRERF1-205ENST00000541110 SPDYE2BA6NHP3 402 aa11.24□□□□□ -0.61
TRERF1-205ENST00000541110 SPDYE6P0CI01 402 aa11.24□□□□□ -0.61
TRERF1-205ENST00000541110 SH2D4BQ5SQS7 431 aa11.24□□□□□ -0.61
TRERF1-205ENST00000541110 STMN2Q93045 179 aa11.24□□□□□ -0.61
TRERF1-205ENST00000541110 GNL1P36915 607 aaPredicted RBP11.24□□□□□ -0.61
TRERF1-205ENST00000541110 IRX3P78415 501 aaPredicted RBP11.24□□□□□ -0.61
TRERF1-205ENST00000541110 UTP14CQ5TAP6 766 aaKnown RBP11.24□□□□□ -0.61
TRERF1-205ENST00000541110 USP25Q9UHP3 1055 aa11.24□□□□□ -0.61
TRERF1-205ENST00000541110 ITM2BQ9Y287 266 aa11.24□□□□□ -0.61
TRERF1-205ENST00000541110 PPP1R12AO14974 1030 aaPredicted RBP11.24□□□□□ -0.61
TRERF1-205ENST00000541110 CADPS2Q86UW7 1296 aa11.24□□□□□ -0.61
TRERF1-205ENST00000541110 H0YIN7 160 aa11.23□□□□□ -0.61
TRERF1-205ENST00000541110 FAM160A1Q05DH4 1040 aa11.23□□□□□ -0.61
TRERF1-205ENST00000541110 USH1GQ495M9 461 aa11.23□□□□□ -0.61
TRERF1-205ENST00000541110 MTRF1LQ9UGC7 380 aaKnown RBP11.23□□□□□ -0.61
TRERF1-205ENST00000541110 SORBS3O60504 671 aa11.23□□□□□ -0.61
TRERF1-205ENST00000541110 GPR161Q8N6U8 529 aaKnown RBP11.23□□□□□ -0.61
TRERF1-205ENST00000541110 CSRNP2Q9H175 543 aa11.23□□□□□ -0.61
TRERF1-205ENST00000541110 RTL9Q8NET4 1388 aa11.23□□□□□ -0.61
TRERF1-205ENST00000541110 DNAJC21Q5F1R6 531 aaKnown RBP11.23□□□□□ -0.61
TRERF1-205ENST00000541110 SLC9C2Q5TAH2 1124 aa11.23□□□□□ -0.61
TRERF1-205ENST00000541110 GKAP1Q5VSY0 366 aaPredicted RBP11.23□□□□□ -0.61
TRERF1-205ENST00000541110 MCM6Q14566 821 aa11.23□□□□□ -0.61
TRERF1-205ENST00000541110 SLC5A4Q9NY91 659 aa11.23□□□□□ -0.61
TRERF1-205ENST00000541110 PLEKHH2Q8IVE3 1493 aa11.23□□□□□ -0.61
TRERF1-205ENST00000541110 PALM3A6NDB9 673 aaPredicted RBP11.23□□□□□ -0.61
TRERF1-205ENST00000541110 ADCY5O95622 1261 aa11.23□□□□□ -0.61
TRERF1-205ENST00000541110 ACRBPQ8NEB7 543 aa11.23□□□□□ -0.61
TRERF1-205ENST00000541110 UIMC1Q96RL1 719 aa11.23□□□□□ -0.61
TRERF1-205ENST00000541110 USTQ9Y2C2 406 aa11.23□□□□□ -0.61
TRERF1-205ENST00000541110 FGD6Q6ZV73 1430 aa11.23□□□□□ -0.61
TRERF1-205ENST00000541110 SPOPO43791 374 aa11.23□□□□□ -0.61
TRERF1-205ENST00000541110 BMP15O95972 392 aa11.23□□□□□ -0.61
TRERF1-205ENST00000541110 GNA11P29992 359 aa11.23□□□□□ -0.61
TRERF1-205ENST00000541110 GADL1Q6ZQY3 521 aa11.23□□□□□ -0.61
TRERF1-205ENST00000541110 CPLX4Q7Z7G2 160 aa11.23□□□□□ -0.61
TRERF1-205ENST00000541110 ZNF830Q96NB3 372 aaPredicted RBP11.23□□□□□ -0.61
TRERF1-205ENST00000541110 PI4KAP2A4QPH2 592 aa11.22□□□□□ -0.61
TRERF1-205ENST00000541110 PI4KAP1Q8N8J0 262 aa11.22□□□□□ -0.61
TRERF1-205ENST00000541110 SETDB1Q15047 1291 aa11.22□□□□□ -0.61
TRERF1-205ENST00000541110 CLGNO14967 610 aa11.22□□□□□ -0.61
TRERF1-205ENST00000541110 ZEB2O60315 1214 aa11.22□□□□□ -0.61
TRERF1-205ENST00000541110 FBXW4P57775 412 aa11.22□□□□□ -0.61
TRERF1-205ENST00000541110 LARGE2Q8N3Y3 721 aa11.22□□□□□ -0.61
TRERF1-205ENST00000541110 SWAP70Q9UH65 585 aa11.22□□□□□ -0.61
TRERF1-205ENST00000541110 NEMFO60524 1076 aa11.22□□□□□ -0.61
TRERF1-205ENST00000541110 SLC12A2P55011 1212 aa11.22□□□□□ -0.61
TRERF1-205ENST00000541110 TCP10Q12799 353 aa11.22□□□□□ -0.61
TRERF1-205ENST00000541110 CPXCR1Q8N123 301 aa11.22□□□□□ -0.61
TRERF1-205ENST00000541110 MIPOL1Q8TD10 442 aa11.22□□□□□ -0.61
TRERF1-205ENST00000541110 ECHDC1Q9NTX5 307 aa11.22□□□□□ -0.61
TRERF1-205ENST00000541110 CALCOCO1Q9P1Z2 691 aa11.22□□□□□ -0.61
TRERF1-205ENST00000541110 PTPRCP08575 1304 aa11.22□□□□□ -0.61
TRERF1-205ENST00000541110 LIN9Q5TKA1 542 aa11.22□□□□□ -0.61
TRERF1-205ENST00000541110 LMTK3Q96Q04 1460 aa11.22□□□□□ -0.61
TRERF1-205ENST00000541110 CDR2Q01850 454 aa11.22□□□□□ -0.61
TRERF1-205ENST00000541110 CCDC121Q6ZUS5 278 aa11.22□□□□□ -0.61
TRERF1-205ENST00000541110 PAGR1Q9BTK6 254 aa11.22□□□□□ -0.61
TRERF1-205ENST00000541110 ZBED4O75132 1171 aa11.21□□□□□ -0.61
TRERF1-205ENST00000541110 RPS6KA2Q15349 733 aa11.21□□□□□ -0.61
TRERF1-205ENST00000541110 DPY19L2Q6NUT2 758 aa11.21□□□□□ -0.61
TRERF1-205ENST00000541110 BSPRYQ5W0U4 402 aa11.21□□□□□ -0.61
TRERF1-205ENST00000541110 Q6ZUG5 572 aa11.21□□□□□ -0.61
TRERF1-205ENST00000541110 HMG20BQ9P0W2 317 aa11.21□□□□□ -0.61
TRERF1-205ENST00000541110 FNDC3AQ9Y2H6 1198 aaKnown RBP11.21□□□□□ -0.61
TRERF1-205ENST00000541110 ANXA1P04083 346 aa11.21□□□□□ -0.61
TRERF1-205ENST00000541110 MCM4P33991 863 aa11.21□□□□□ -0.61
TRERF1-205ENST00000541110 ZBTB33Q86T24 672 aa11.21□□□□□ -0.61
TRERF1-205ENST00000541110 ZSCAN16Q9H4T2 348 aaPredicted RBP11.21□□□□□ -0.61
TRERF1-205ENST00000541110 PDE6AP16499 860 aa11.21□□□□□ -0.62
TRERF1-205ENST00000541110 INTS8Q75QN2 995 aaKnown RBP11.21□□□□□ -0.62
TRERF1-205ENST00000541110 NECAB1Q8N987 351 aa11.21□□□□□ -0.62
TRERF1-205ENST00000541110 HELBQ8NG08 1087 aaPredicted RBP11.21□□□□□ -0.62
TRERF1-205ENST00000541110 OLA1Q9NTK5 396 aaKnown RBP11.21□□□□□ -0.62
TRERF1-205ENST00000541110 HECW1Q76N89 1606 aa11.21□□□□□ -0.62
TRERF1-205ENST00000541110 H7C1D1 291 aa11.21□□□□□ -0.62
TRERF1-205ENST00000541110 UFL1O94874 794 aa11.21□□□□□ -0.62
TRERF1-205ENST00000541110 RPL13P26373 211 aaKnown RBP11.21□□□□□ -0.62
TRERF1-205ENST00000541110 CALCOCO2Q13137 446 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms