RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 TBC1D10CQ8IV04 446 aa14.6□□□□□ -0.07
AP003559.1-201ENST00000540906 FOXD4L4Q8WXT5 416 aaPredicted RBP14.6□□□□□ -0.07
AP003559.1-201ENST00000540906 AIDAQ96BJ3 306 aa14.6□□□□□ -0.07
AP003559.1-201ENST00000540906 ALDH8A1Q9H2A2 487 aaPredicted RBP14.6□□□□□ -0.07
AP003559.1-201ENST00000540906 CWC22Q9HCG8 908 aaKnown RBP14.6□□□□□ -0.07
AP003559.1-201ENST00000540906 GPHNQ9NQX3 736 aaPredicted RBP14.6□□□□□ -0.07
AP003559.1-201ENST00000540906 POLLQ9UGP5 575 aa14.6□□□□□ -0.07
AP003559.1-201ENST00000540906 NSFL1CQ9UNZ2 370 aaKnown RBP14.6□□□□□ -0.07
AP003559.1-201ENST00000540906 LEMD3Q9Y2U8 911 aa14.6□□□□□ -0.07
AP003559.1-201ENST00000540906 QSER1Q2KHR3 1735 aa14.6□□□□□ -0.07
AP003559.1-201ENST00000540906 DUOX1Q9NRD9 1551 aa14.6□□□□□ -0.07
AP003559.1-201ENST00000540906 UFL1O94874 794 aa14.59□□□□□ -0.07
AP003559.1-201ENST00000540906 DYNLL1P63167 89 aaKnown RBP14.59□□□□□ -0.07
AP003559.1-201ENST00000540906 INCENPQ9NQS7 918 aa14.59□□□□□ -0.07
AP003559.1-201ENST00000540906 PARP3Q9Y6F1 533 aa14.59□□□□□ -0.07
AP003559.1-201ENST00000540906 GSG1L2A8MUP6 293 aa14.59□□□□□ -0.07
AP003559.1-201ENST00000540906 SMIM22K7EJ46 135 aa14.59□□□□□ -0.07
AP003559.1-201ENST00000540906 PRDX5P30044 214 aa14.59□□□□□ -0.07
AP003559.1-201ENST00000540906 PPEF1O14829 653 aaPredicted RBP14.58□□□□□ -0.08
AP003559.1-201ENST00000540906 BBOX1O75936 387 aa14.58□□□□□ -0.08
AP003559.1-201ENST00000540906 APPP05067 770 aa14.58□□□□□ -0.08
AP003559.1-201ENST00000540906 HMGB2P26583 209 aaKnown RBP14.58□□□□□ -0.08
AP003559.1-201ENST00000540906 ANTXR2P58335 489 aa14.58□□□□□ -0.08
AP003559.1-201ENST00000540906 DHX32Q7L7V1 743 aaKnown RBP14.58□□□□□ -0.08
AP003559.1-201ENST00000540906 IFNL3Q8IZI9 196 aa14.58□□□□□ -0.08
AP003559.1-201ENST00000540906 STK32BQ9NY57 414 aa14.58□□□□□ -0.08
AP003559.1-201ENST00000540906 CTNNA3Q9UI47 895 aa14.58□□□□□ -0.08
AP003559.1-201ENST00000540906 PATL2C9JE40 543 aaKnown RBP14.57□□□□□ -0.08
AP003559.1-201ENST00000540906 SEMA3EO15041 775 aa14.57□□□□□ -0.08
AP003559.1-201ENST00000540906 MECOMQ03112 1051 aa14.57□□□□□ -0.08
AP003559.1-201ENST00000540906 STK3Q13188 491 aa14.57□□□□□ -0.08
AP003559.1-201ENST00000540906 IMMTQ16891 758 aaKnown RBP14.57□□□□□ -0.08
AP003559.1-201ENST00000540906 MB21D2Q8IYB1 491 aaPredicted RBP14.57□□□□□ -0.08
AP003559.1-201ENST00000540906 IL27Q8NEV9 243 aa14.57□□□□□ -0.08
AP003559.1-201ENST00000540906 TDRD7Q8NHU6 1098 aaKnown RBP14.57□□□□□ -0.08
AP003559.1-201ENST00000540906 TBC1D16Q8TBP0 767 aa14.57□□□□□ -0.08
AP003559.1-201ENST00000540906 BRF1Q92994 677 aa14.57□□□□□ -0.08
AP003559.1-201ENST00000540906 NSUN4Q96CB9 384 aaKnown RBP14.57□□□□□ -0.08
AP003559.1-201ENST00000540906 ZSCAN31Q96LW9 406 aaPredicted RBP14.57□□□□□ -0.08
AP003559.1-201ENST00000540906 RIOK1Q9BRS2 568 aaKnown RBP14.57□□□□□ -0.08
AP003559.1-201ENST00000540906 MAST2Q6P0Q8 1798 aa14.57□□□□□ -0.08
AP003559.1-201ENST00000540906 PDS5AQ29RF7 1337 aaKnown RBP14.57□□□□□ -0.08
AP003559.1-201ENST00000540906 CHD4Q14839 1912 aa14.57□□□□□ -0.08
AP003559.1-201ENST00000540906 PSDA5PKW4 1024 aaPredicted RBP14.57□□□□□ -0.08
AP003559.1-201ENST00000540906 C15orf52Q6ZUT6 534 aaKnown RBP14.57□□□□□ -0.08
AP003559.1-201ENST00000540906 SDR42E1Q8WUS8 393 aa14.57□□□□□ -0.08
AP003559.1-201ENST00000540906 GGA1Q9UJY5 639 aa14.57□□□□□ -0.08
AP003559.1-201ENST00000540906 SLC4A4Q9Y6R1 1079 aa14.57□□□□□ -0.08
AP003559.1-201ENST00000540906 ZNF213O14771 459 aa14.56□□□□□ -0.08
AP003559.1-201ENST00000540906 BRD1O95696 1058 aa14.56□□□□□ -0.08
AP003559.1-201ENST00000540906 NPR1P16066 1061 aa14.56□□□□□ -0.08
AP003559.1-201ENST00000540906 ATP2B4P23634 1241 aa14.56□□□□□ -0.08
AP003559.1-201ENST00000540906 NUCB2P80303 420 aa14.56□□□□□ -0.08
AP003559.1-201ENST00000540906 CTDSPL2Q05D32 466 aa14.56□□□□□ -0.08
AP003559.1-201ENST00000540906 APOBRQ0VD83 1088 aa14.56□□□□□ -0.08
AP003559.1-201ENST00000540906 R3HDM1Q15032 1099 aaKnown RBP14.56□□□□□ -0.08
AP003559.1-201ENST00000540906 ALX1Q15699 326 aa14.56□□□□□ -0.08
AP003559.1-201ENST00000540906 SH2B1Q9NRF2 756 aaPredicted RBP14.56□□□□□ -0.08
AP003559.1-201ENST00000540906 PODXL2Q9NZ53 605 aa14.56□□□□□ -0.08
AP003559.1-201ENST00000540906 TIAM2Q8IVF5 1701 aa14.56□□□□□ -0.08
AP003559.1-201ENST00000540906 NEDD4P46934 1319 aa14.55□□□□□ -0.08
AP003559.1-201ENST00000540906 BAG4O95429 457 aaKnown RBP14.55□□□□□ -0.08
AP003559.1-201ENST00000540906 EVX2Q03828 476 aa14.55□□□□□ -0.08
AP003559.1-201ENST00000540906 NAA16Q6N069 864 aaPredicted RBP14.55□□□□□ -0.08
AP003559.1-201ENST00000540906 SP8Q8IXZ3 490 aa14.55□□□□□ -0.08
AP003559.1-201ENST00000540906 AGXT2Q9BYV1 514 aa14.55□□□□□ -0.08
AP003559.1-201ENST00000540906 ATP6V0A2Q9Y487 856 aa14.55□□□□□ -0.08
AP003559.1-201ENST00000540906 BAZ2AQ9UIF9 1905 aaKnown RBP14.55□□□□□ -0.08
AP003559.1-201ENST00000540906 SRCAPQ6ZRS2 3230 aa14.55□□□□□ -0.08
AP003559.1-201ENST00000540906 CCDC88AQ3V6T2 1871 aa14.55□□□□□ -0.08
AP003559.1-201ENST00000540906 MAGEB6P1A0A0J9YX57 407 aa14.55□□□□□ -0.08
AP003559.1-201ENST00000540906 SOCS7O14512 581 aa14.55□□□□□ -0.08
AP003559.1-201ENST00000540906 GJB2P29033 226 aa14.55□□□□□ -0.08
AP003559.1-201ENST00000540906 CHRNA5P30532 468 aa14.55□□□□□ -0.08
AP003559.1-201ENST00000540906 ANKRD1Q15327 319 aa14.55□□□□□ -0.08
AP003559.1-201ENST00000540906 CYB5R4Q7L1T6 521 aa14.55□□□□□ -0.08
AP003559.1-201ENST00000540906 CD209Q9NNX6 404 aa14.55□□□□□ -0.08
AP003559.1-201ENST00000540906 SLX4Q8IY92 1834 aa14.54□□□□□ -0.08
AP003559.1-201ENST00000540906 ZBTB22O15209 634 aa14.54□□□□□ -0.08
AP003559.1-201ENST00000540906 PDE6BP35913 854 aa14.54□□□□□ -0.08
AP003559.1-201ENST00000540906 C2CD5Q86YS7 1000 aa14.54□□□□□ -0.08
AP003559.1-201ENST00000540906 STK11IPQ8N1F8 1099 aa14.54□□□□□ -0.08
AP003559.1-201ENST00000540906 ZMYM6O95789 1325 aa14.53□□□□□ -0.08
AP003559.1-201ENST00000540906 CYP2D7A0A087X1C5 515 aa14.53□□□□□ -0.08
AP003559.1-201ENST00000540906 PRC1O43663 620 aa14.53□□□□□ -0.08
AP003559.1-201ENST00000540906 JAK2O60674 1132 aa14.53□□□□□ -0.08
AP003559.1-201ENST00000540906 HMGB1P09429 215 aaKnown RBP14.53□□□□□ -0.08
AP003559.1-201ENST00000540906 SCRN1Q12765 414 aa14.53□□□□□ -0.08
AP003559.1-201ENST00000540906 CLEC17AQ6ZS10 378 aa14.53□□□□□ -0.08
AP003559.1-201ENST00000540906 ZNF804AQ7Z570 1209 aa14.53□□□□□ -0.08
AP003559.1-201ENST00000540906 ZNF622Q969S3 477 aaKnown RBP eCLIP14.53□□□□□ -0.08
AP003559.1-201ENST00000540906 MASTLQ96GX5 879 aa14.53□□□□□ -0.08
AP003559.1-201ENST00000540906 NAPBQ9H115 298 aa14.53□□□□□ -0.08
AP003559.1-201ENST00000540906 SMC3Q9UQE7 1217 aa14.53□□□□□ -0.08
AP003559.1-201ENST00000540906 KIAA1551Q9HCM1 1747 aa14.53□□□□□ -0.08
AP003559.1-201ENST00000540906 B4E1Z4 1266 aa14.52□□□□□ -0.08
AP003559.1-201ENST00000540906 C6orf229H3BNL8 230 aa14.52□□□□□ -0.08
AP003559.1-201ENST00000540906 RIMBP2O15034 1052 aa14.52□□□□□ -0.08
AP003559.1-201ENST00000540906 IL1R1P14778 569 aa14.52□□□□□ -0.08
AP003559.1-201ENST00000540906 GTF3C6Q969F1 213 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms