RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 INHBEP58166 350 aa20.43■□□□□ 0.86
TRIM65-203ENST00000540812 FBXO46Q6PJ61 603 aaPredicted RBP20.43■□□□□ 0.86
TRIM65-203ENST00000540812 VPS37DQ86XT2 251 aa20.43■□□□□ 0.86
TRIM65-203ENST00000540812 TEPSINQ96N21 525 aa20.43■□□□□ 0.86
TRIM65-203ENST00000540812 USP44Q9H0E7 712 aa20.43■□□□□ 0.86
TRIM65-203ENST00000540812 ARAP2Q8WZ64 1704 aa20.43■□□□□ 0.86
TRIM65-203ENST00000540812 TCP10L2B9ZVM9 353 aa20.42■□□□□ 0.86
TRIM65-203ENST00000540812 E9PSI1 815 aa20.42■□□□□ 0.86
TRIM65-203ENST00000540812 SLC34A2O95436 690 aa20.42■□□□□ 0.86
TRIM65-203ENST00000540812 TNFAIP1Q13829 316 aa20.42■□□□□ 0.86
TRIM65-203ENST00000540812 ANKRD13AQ8IZ07 590 aa20.42■□□□□ 0.86
TRIM65-203ENST00000540812 ELP3Q9H9T3 547 aa20.42■□□□□ 0.86
TRIM65-203ENST00000540812 PDE8BO95263 885 aa20.41■□□□□ 0.86
TRIM65-203ENST00000540812 BCAMP50895 628 aa20.41■□□□□ 0.86
TRIM65-203ENST00000540812 TMEM39BQ9GZU3 492 aa20.41■□□□□ 0.86
TRIM65-203ENST00000540812 SLFN5Q08AF3 891 aa20.4■□□□□ 0.86
TRIM65-203ENST00000540812 CAVIN4Q5BKX8 364 aa20.4■□□□□ 0.86
TRIM65-203ENST00000540812 PTPN18Q99952 460 aa20.4■□□□□ 0.86
TRIM65-203ENST00000540812 OTOFQ9HC10 1997 aa20.4■□□□□ 0.86
TRIM65-203ENST00000540812 CENPFP49454 3210 aa20.4■□□□□ 0.86
TRIM65-203ENST00000540812 LAMB1P07942 1786 aa20.39■□□□□ 0.86
TRIM65-203ENST00000540812 FRAT2O75474 233 aaPredicted RBP20.39■□□□□ 0.85
TRIM65-203ENST00000540812 CACNB3P54284 484 aa20.39■□□□□ 0.85
TRIM65-203ENST00000540812 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.39■□□□□ 0.85
TRIM65-203ENST00000540812 TBC1D22AQ8WUA7 517 aa20.39■□□□□ 0.85
TRIM65-203ENST00000540812 CNKSR2Q8WXI2 1034 aa20.39■□□□□ 0.85
TRIM65-203ENST00000540812 OPTNQ96CV9 577 aa20.39■□□□□ 0.85
TRIM65-203ENST00000540812 CDCA7LQ96GN5 454 aa20.39■□□□□ 0.85
TRIM65-203ENST00000540812 TESPA1A2RU30 521 aaPredicted RBP20.38■□□□□ 0.85
TRIM65-203ENST00000540812 FGFR2P21802 821 aa20.38■□□□□ 0.85
TRIM65-203ENST00000540812 RFX5P48382 616 aaPredicted RBP20.38■□□□□ 0.85
TRIM65-203ENST00000540812 CRHR2Q13324 411 aa20.38■□□□□ 0.85
TRIM65-203ENST00000540812 TRIM17Q9Y577 477 aa20.38■□□□□ 0.85
TRIM65-203ENST00000540812 HDLBPQ00341 1268 aaKnown RBP20.37■□□□□ 0.85
TRIM65-203ENST00000540812 OTOP1Q7RTM1 612 aa20.37■□□□□ 0.85
TRIM65-203ENST00000540812 TEKT1Q969V4 418 aa20.37■□□□□ 0.85
TRIM65-203ENST00000540812 MS4A4AQ96JQ5 239 aa20.37■□□□□ 0.85
TRIM65-203ENST00000540812 EYA2O00167 538 aa20.36■□□□□ 0.85
TRIM65-203ENST00000540812 TNNI2P48788 182 aa20.36■□□□□ 0.85
TRIM65-203ENST00000540812 CAP1Q01518 475 aa20.36■□□□□ 0.85
TRIM65-203ENST00000540812 VGLL4Q14135 290 aa20.36■□□□□ 0.85
TRIM65-203ENST00000540812 PUM3Q15397 648 aaKnown RBP20.36■□□□□ 0.85
TRIM65-203ENST00000540812 OTUD7BQ6GQQ9 843 aa20.36■□□□□ 0.85
TRIM65-203ENST00000540812 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.36■□□□□ 0.85
TRIM65-203ENST00000540812 MKI67P46013 3256 aaKnown RBP20.35■□□□□ 0.85
TRIM65-203ENST00000540812 IFIT1P09914 478 aaKnown RBP20.35■□□□□ 0.85
TRIM65-203ENST00000540812 MAP3K9P80192 1104 aa20.35■□□□□ 0.85
TRIM65-203ENST00000540812 ALDH1L2Q3SY69 923 aa20.35■□□□□ 0.85
TRIM65-203ENST00000540812 APOBEC3HQ6NTF7 200 aaKnown RBP20.35■□□□□ 0.85
TRIM65-203ENST00000540812 CD99L2Q8TCZ2 262 aa20.35■□□□□ 0.85
TRIM65-203ENST00000540812 BRI3BPQ8WY22 251 aa20.35■□□□□ 0.85
TRIM65-203ENST00000540812 ZDHHC15Q96MV8 337 aa20.35■□□□□ 0.85
TRIM65-203ENST00000540812 SMC4Q9NTJ3 1288 aa20.35■□□□□ 0.85
TRIM65-203ENST00000540812 BRCA2P51587 3418 aa20.35■□□□□ 0.85
TRIM65-203ENST00000540812 KIF16BQ96L93 1317 aa20.34■□□□□ 0.85
TRIM65-203ENST00000540812 ATG9AQ7Z3C6 839 aa20.33■□□□□ 0.85
TRIM65-203ENST00000540812 ERO1AQ96HE7 468 aa20.33■□□□□ 0.85
TRIM65-203ENST00000540812 MRIQ9BWK5 157 aa20.33■□□□□ 0.85
TRIM65-203ENST00000540812 SLC5A1P13866 664 aa20.32■□□□□ 0.84
TRIM65-203ENST00000540812 TRMT2AQ8IZ69 625 aaKnown RBP20.32■□□□□ 0.84
TRIM65-203ENST00000540812 LPIN2Q92539 896 aa20.32■□□□□ 0.84
TRIM65-203ENST00000540812 SUGT1Q9Y2Z0 365 aa20.32■□□□□ 0.84
TRIM65-203ENST00000540812 CSADQ9Y600 493 aa20.32■□□□□ 0.84
TRIM65-203ENST00000540812 CCL15-CCL14A0A0B4J2E2 113 aa20.31■□□□□ 0.84
TRIM65-203ENST00000540812 CCL15Q16663 113 aa20.31■□□□□ 0.84
TRIM65-203ENST00000540812 OTUD5Q96G74 571 aa20.31■□□□□ 0.84
TRIM65-203ENST00000540812 SIL1Q9H173 461 aa20.31■□□□□ 0.84
TRIM65-203ENST00000540812 TMOD2Q9NZR1 351 aa20.31■□□□□ 0.84
TRIM65-203ENST00000540812 SNCAIPQ9Y6H5 919 aa20.31■□□□□ 0.84
TRIM65-203ENST00000540812 MAST3O60307 1309 aa20.3■□□□□ 0.84
TRIM65-203ENST00000540812 GTF2A2P52657 109 aa20.3■□□□□ 0.84
TRIM65-203ENST00000540812 SP3Q02447 781 aa20.3■□□□□ 0.84
TRIM65-203ENST00000540812 HHIPL2Q6UWX4 724 aa20.3■□□□□ 0.84
TRIM65-203ENST00000540812 FAM83AQ86UY5 434 aa20.3■□□□□ 0.84
TRIM65-203ENST00000540812 FAM43AQ8N2R8 423 aa20.3■□□□□ 0.84
TRIM65-203ENST00000540812 WRNIP1Q96S55 665 aa20.3■□□□□ 0.84
TRIM65-203ENST00000540812 EFCC1Q9HA90 598 aa20.3■□□□□ 0.84
TRIM65-203ENST00000540812 PTPN22Q9Y2R2 807 aa20.3■□□□□ 0.84
TRIM65-203ENST00000540812 SPDYE5A6NIY4 337 aa20.29■□□□□ 0.84
TRIM65-203ENST00000540812 UBTFL1P0CB47 393 aaPredicted RBP20.29■□□□□ 0.84
TRIM65-203ENST00000540812 PRPF38BQ5VTL8 546 aaKnown RBP20.29■□□□□ 0.84
TRIM65-203ENST00000540812 FKBP1CQ5VVH2 108 aa20.29■□□□□ 0.84
TRIM65-203ENST00000540812 WDR66Q8TBY9 1149 aa20.29■□□□□ 0.84
TRIM65-203ENST00000540812 ZKSCAN4Q969J2 545 aaPredicted RBP20.29■□□□□ 0.84
TRIM65-203ENST00000540812 NOB1Q9ULX3 412 aaKnown RBP20.29■□□□□ 0.84
TRIM65-203ENST00000540812 POTEFA5A3E0 1075 aa20.28■□□□□ 0.84
TRIM65-203ENST00000540812 TAF1CQ15572 869 aaPredicted RBP20.28■□□□□ 0.84
TRIM65-203ENST00000540812 DIXDC1Q155Q3 683 aa20.28■□□□□ 0.84
TRIM65-203ENST00000540812 ATP2B3Q16720 1220 aa20.27■□□□□ 0.84
TRIM65-203ENST00000540812 MIGA2Q7L4E1 593 aa20.27■□□□□ 0.84
TRIM65-203ENST00000540812 ZFYVE28Q9HCC9 887 aa20.27■□□□□ 0.84
TRIM65-203ENST00000540812 PA2G4Q9UQ80 394 aaKnown RBP20.27■□□□□ 0.84
TRIM65-203ENST00000540812 DAGLAQ9Y4D2 1042 aa20.27■□□□□ 0.84
TRIM65-203ENST00000540812 LRRFIP2Q9Y608 721 aaKnown RBP20.27■□□□□ 0.84
TRIM65-203ENST00000540812 KIAA0100Q14667 2235 aaKnown RBP20.27■□□□□ 0.84
TRIM65-203ENST00000540812 RPAP1Q9BWH6 1393 aaPredicted RBP20.26■□□□□ 0.83
TRIM65-203ENST00000540812 CIAO1O76071 339 aa20.26■□□□□ 0.83
TRIM65-203ENST00000540812 PRDX5P30044 214 aa20.26■□□□□ 0.83
TRIM65-203ENST00000540812 CDC42EP5Q6NZY7 148 aa20.26■□□□□ 0.83
TRIM65-203ENST00000540812 ERO1BQ86YB8 467 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms