RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 ASAP1Q9ULH1 1129 aa16.07■□□□□ 0.16
USP3-204ENST00000540797 PREX2Q70Z35 1606 aa16.07■□□□□ 0.16
USP3-204ENST00000540797 MACROD2A1Z1Q3 448 aa16.07■□□□□ 0.16
USP3-204ENST00000540797 PHACTR2O75167 634 aa16.07■□□□□ 0.16
USP3-204ENST00000540797 CRKLP46109 303 aaKnown RBP16.07■□□□□ 0.16
USP3-204ENST00000540797 PRKG1Q13976 671 aa16.07■□□□□ 0.16
USP3-204ENST00000540797 ZBTB38Q8NAP3 1195 aaPredicted RBP16.07■□□□□ 0.16
USP3-204ENST00000540797 ZBTB21Q9ULJ3 1066 aa16.07■□□□□ 0.16
USP3-204ENST00000540797 GTF2IP78347 998 aa16.06■□□□□ 0.16
USP3-204ENST00000540797 SP4Q02446 784 aa16.06■□□□□ 0.16
USP3-204ENST00000540797 C8orf34Q49A92 452 aa16.06■□□□□ 0.16
USP3-204ENST00000540797 GIMAP6Q6P9H5 292 aa16.06■□□□□ 0.16
USP3-204ENST00000540797 KDRP35968 1356 aa16.06■□□□□ 0.16
USP3-204ENST00000540797 BACH1O14867 736 aa16.06■□□□□ 0.16
USP3-204ENST00000540797 USP48Q86UV5 1035 aa16.06■□□□□ 0.16
USP3-204ENST00000540797 BIN2Q9UBW5 565 aaPredicted RBP16.06■□□□□ 0.16
USP3-204ENST00000540797 USP6P35125 1406 aa16.06■□□□□ 0.16
USP3-204ENST00000540797 KDM5CP41229 1560 aa16.06■□□□□ 0.16
USP3-204ENST00000540797 MYOM2P54296 1465 aa16.06■□□□□ 0.16
USP3-204ENST00000540797 GSDMDP57764 484 aa16.06■□□□□ 0.16
USP3-204ENST00000540797 NCBP1Q09161 790 aaKnown RBP16.06■□□□□ 0.16
USP3-204ENST00000540797 GPR162Q16538 588 aa16.06■□□□□ 0.16
USP3-204ENST00000540797 MAPKAPK5Q8IW41 473 aa16.06■□□□□ 0.16
USP3-204ENST00000540797 FAM227BQ96M60 508 aa16.06■□□□□ 0.16
USP3-204ENST00000540797 PSMA7O14818 248 aa16.06■□□□□ 0.16
USP3-204ENST00000540797 TNNT1P13805 278 aa16.06■□□□□ 0.16
USP3-204ENST00000540797 TAX1BP1Q86VP1 789 aa16.06■□□□□ 0.16
USP3-204ENST00000540797 NAP1L4Q99733 375 aaKnown RBP16.06■□□□□ 0.16
USP3-204ENST00000540797 NDUFB9Q9Y6M9 179 aa16.06■□□□□ 0.16
USP3-204ENST00000540797 ZNF532Q9HCE3 1301 aa16.06■□□□□ 0.16
USP3-204ENST00000540797 ATP7BP35670 1465 aa16.06■□□□□ 0.16
USP3-204ENST00000540797 H7C1D1 291 aa16.05■□□□□ 0.16
USP3-204ENST00000540797 SLC27A2O14975 620 aa16.05■□□□□ 0.16
USP3-204ENST00000540797 FAM193AP78312 1265 aa16.05■□□□□ 0.16
USP3-204ENST00000540797 BRAPQ7Z569 592 aa16.05■□□□□ 0.16
USP3-204ENST00000540797 CTNNBL1Q8WYA6 563 aaPredicted RBP16.05■□□□□ 0.16
USP3-204ENST00000540797 FAM13AO94988 1023 aa16.05■□□□□ 0.16
USP3-204ENST00000540797 DTHD1Q6ZMT9 781 aa16.05■□□□□ 0.16
USP3-204ENST00000540797 MAP3K15Q6ZN16 1313 aa16.05■□□□□ 0.16
USP3-204ENST00000540797 RTL1A6NKG5 1358 aa16.05■□□□□ 0.16
USP3-204ENST00000540797 ESPNB1AK53 854 aa16.05■□□□□ 0.16
USP3-204ENST00000540797 CPA1P15085 419 aa16.05■□□□□ 0.16
USP3-204ENST00000540797 RPS6KB1P23443 525 aa16.05■□□□□ 0.16
USP3-204ENST00000540797 CASQ1P31415 396 aa16.05■□□□□ 0.16
USP3-204ENST00000540797 KLHL40Q2TBA0 621 aa16.05■□□□□ 0.16
USP3-204ENST00000540797 UBXN4Q92575 508 aa16.05■□□□□ 0.16
USP3-204ENST00000540797 EIF3JO75822 258 aaKnown RBP16.05■□□□□ 0.16
USP3-204ENST00000540797 PCCAP05165 728 aaPredicted RBP16.05■□□□□ 0.16
USP3-204ENST00000540797 GBP2P32456 591 aaPredicted RBP16.05■□□□□ 0.16
USP3-204ENST00000540797 KRT27Q7Z3Y8 459 aa16.05■□□□□ 0.16
USP3-204ENST00000540797 TGFBRAP1Q8WUH2 860 aa16.05■□□□□ 0.16
USP3-204ENST00000540797 SPATA31E1Q6ZUB1 1445 aa16.04■□□□□ 0.16
USP3-204ENST00000540797 MFSD14BQ5SR56 506 aa16.04■□□□□ 0.16
USP3-204ENST00000540797 CCDC172P0C7W6 258 aa16.04■□□□□ 0.16
USP3-204ENST00000540797 CA8P35219 290 aa16.04■□□□□ 0.16
USP3-204ENST00000540797 FCHSD1Q86WN1 690 aa16.04■□□□□ 0.16
USP3-204ENST00000540797 NEMFO60524 1076 aa16.04■□□□□ 0.16
USP3-204ENST00000540797 ATP2B4P23634 1241 aa16.04■□□□□ 0.16
USP3-204ENST00000540797 CTNNA2P26232 953 aa16.04■□□□□ 0.16
USP3-204ENST00000540797 FAM182BQ5T319 152 aa16.04■□□□□ 0.16
USP3-204ENST00000540797 TTF2Q9UNY4 1162 aaKnown RBP16.04■□□□□ 0.16
USP3-204ENST00000540797 ZRSR2Q15696 482 aaKnown RBP16.04■□□□□ 0.16
USP3-204ENST00000540797 SPAG5Q96R06 1193 aa16.04■□□□□ 0.16
USP3-204ENST00000540797 DACT1Q9NYF0 836 aa16.04■□□□□ 0.16
USP3-204ENST00000540797 PAFAH1B1P43034 410 aa16.03■□□□□ 0.16
USP3-204ENST00000540797 ZSCAN30Q86W11 494 aa16.03■□□□□ 0.16
USP3-204ENST00000540797 LETM2Q2VYF4 491 aa16.03■□□□□ 0.16
USP3-204ENST00000540797 LUZP1Q86V48 1076 aa16.03■□□□□ 0.16
USP3-204ENST00000540797 TBC1D5Q92609 795 aa16.03■□□□□ 0.16
USP3-204ENST00000540797 CNKSR1Q969H4 720 aa16.03■□□□□ 0.16
USP3-204ENST00000540797 PKD2L1Q9P0L9 805 aa16.03■□□□□ 0.16
USP3-204ENST00000540797 ANGEL1Q9UNK9 670 aaKnown RBP16.03■□□□□ 0.16
USP3-204ENST00000540797 PRR36Q9H6K5 1346 aa16.03■□□□□ 0.16
USP3-204ENST00000540797 NOP2P46087 812 aaKnown RBP16.03■□□□□ 0.16
USP3-204ENST00000540797 CTDSPL2Q05D32 466 aa16.03■□□□□ 0.16
USP3-204ENST00000540797 ALS2CR12Q96Q35 445 aa16.03■□□□□ 0.16
USP3-204ENST00000540797 ERCC6L2Q5T890 1561 aa16.03■□□□□ 0.16
USP3-204ENST00000540797 IGSF1Q8N6C5 1336 aa16.03■□□□□ 0.16
USP3-204ENST00000540797 URI1O94763 535 aaPredicted RBP16.03■□□□□ 0.16
USP3-204ENST00000540797 TEKT1Q969V4 418 aa16.03■□□□□ 0.16
USP3-204ENST00000540797 USP40Q9NVE5 1235 aa16.03■□□□□ 0.16
USP3-204ENST00000540797 TMCO5BA8MYB1 307 aa16.02■□□□□ 0.16
USP3-204ENST00000540797 DEXIO95424 95 aa16.02■□□□□ 0.16
USP3-204ENST00000540797 SLC1A4P43007 532 aa16.02■□□□□ 0.16
USP3-204ENST00000540797 SPAG1Q07617 926 aa16.02■□□□□ 0.16
USP3-204ENST00000540797 EAPPQ56P03 285 aaPredicted RBP16.02■□□□□ 0.16
USP3-204ENST00000540797 MAP7D2Q96T17 732 aa16.02■□□□□ 0.16
USP3-204ENST00000540797 USP44Q9H0E7 712 aa16.02■□□□□ 0.16
USP3-204ENST00000540797 UNC5CLQ8IV45 518 aa16.02■□□□□ 0.16
USP3-204ENST00000540797 CTAGE1Q96RT6 745 aa16.02■□□□□ 0.16
USP3-204ENST00000540797 IVNS1ABPQ9Y6Y0 642 aa16.02■□□□□ 0.16
USP3-204ENST00000540797 KIF18AQ8NI77 898 aa16.02■□□□□ 0.16
USP3-204ENST00000540797 ADCY5O95622 1261 aa16.02■□□□□ 0.15
USP3-204ENST00000540797 ATP5JP18859 108 aa16.02■□□□□ 0.15
USP3-204ENST00000540797 IBTKQ9P2D0 1353 aaPredicted RBP16.02■□□□□ 0.15
USP3-204ENST00000540797 IL6STP40189 918 aaPredicted RBP16.01■□□□□ 0.15
USP3-204ENST00000540797 TRMT1Q9NXH9 659 aaKnown RBP16.01■□□□□ 0.15
USP3-204ENST00000540797 V9GY48 417 aaPredicted RBP16.01■□□□□ 0.15
USP3-204ENST00000540797 ARHGAP27Q6ZUM4 889 aa16.01■□□□□ 0.15
USP3-204ENST00000540797 IMPG2Q9BZV3 1241 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms