RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 TNFAIP1Q13829 316 aa26.11■■□□□ 1.77
CHFR-217ENST00000540537 PRKG1Q13976 671 aa26.11■■□□□ 1.77
CHFR-217ENST00000540537 GRIK5Q16478 980 aa26.11■■□□□ 1.77
CHFR-217ENST00000540537 MAP3K11Q16584 847 aa26.11■■□□□ 1.77
CHFR-217ENST00000540537 ATP2B3Q16720 1220 aa26.11■■□□□ 1.77
CHFR-217ENST00000540537 SUPT20HL1Q3ZLR7 823 aa26.11■■□□□ 1.77
CHFR-217ENST00000540537 FRAT1Q92837 279 aaPredicted RBP26.11■■□□□ 1.77
CHFR-217ENST00000540537 ZNF70Q9UC06 446 aaPredicted RBP26.11■■□□□ 1.77
CHFR-217ENST00000540537 ANGEL1Q9UNK9 670 aaKnown RBP26.11■■□□□ 1.77
CHFR-217ENST00000540537 SUGT1Q9Y2Z0 365 aa26.11■■□□□ 1.77
CHFR-217ENST00000540537 PA2G4Q9UQ80 394 aaKnown RBP26.1■■□□□ 1.77
CHFR-217ENST00000540537 PPP1R12BO60237 982 aaPredicted RBP26.09■■□□□ 1.77
CHFR-217ENST00000540537 MTX1Q13505 466 aa26.09■■□□□ 1.77
CHFR-217ENST00000540537 RASA3Q14644 834 aa26.09■■□□□ 1.77
CHFR-217ENST00000540537 MRIQ9BWK5 157 aa26.09■■□□□ 1.77
CHFR-217ENST00000540537 TDRD3Q9H7E2 651 aaKnown RBP26.09■■□□□ 1.77
CHFR-217ENST00000540537 MAST3O60307 1309 aa26.09■■□□□ 1.77
CHFR-217ENST00000540537 TRPA1O75762 1119 aa26.08■■□□□ 1.77
CHFR-217ENST00000540537 TEKT1Q969V4 418 aa26.08■■□□□ 1.77
CHFR-217ENST00000540537 TNNQ9UQP3 1299 aa26.08■■□□□ 1.77
CHFR-217ENST00000540537 UNCXA6NJT0 531 aa26.07■■□□□ 1.76
CHFR-217ENST00000540537 NBPF12Q5TAG4 269 aaPredicted RBP26.07■■□□□ 1.76
CHFR-217ENST00000540537 ZKSCAN2Q63HK3 967 aa26.07■■□□□ 1.76
CHFR-217ENST00000540537 WDR66Q8TBY9 1149 aa26.07■■□□□ 1.76
CHFR-217ENST00000540537 SRGAP3O43295 1099 aa26.06■■□□□ 1.76
CHFR-217ENST00000540537 CLUAP1Q96AJ1 413 aa26.06■■□□□ 1.76
CHFR-217ENST00000540537 ABHD8Q96I13 439 aa26.06■■□□□ 1.76
CHFR-217ENST00000540537 GNL3LQ9NVN8 582 aaKnown RBP26.06■■□□□ 1.76
CHFR-217ENST00000540537 FZD1Q9UP38 647 aa26.06■■□□□ 1.76
CHFR-217ENST00000540537 GNAI2P04899 355 aa26.05■■□□□ 1.76
CHFR-217ENST00000540537 ZDHHC15Q96MV8 337 aa26.05■■□□□ 1.76
CHFR-217ENST00000540537 ZBTB22O15209 634 aa26.04■■□□□ 1.76
CHFR-217ENST00000540537 TM4SF4P48230 202 aa26.04■■□□□ 1.76
CHFR-217ENST00000540537 TNNI2P48788 182 aa26.04■■□□□ 1.76
CHFR-217ENST00000540537 SPRYD7Q5W111 196 aa26.04■■□□□ 1.76
CHFR-217ENST00000540537 ZBED9Q6R2W3 1325 aa26.04■■□□□ 1.76
CHFR-217ENST00000540537 SEMA3EO15041 775 aa26.03■■□□□ 1.76
CHFR-217ENST00000540537 IREB2P48200 963 aaKnown RBP26.03■■□□□ 1.76
CHFR-217ENST00000540537 SREBF2Q12772 1141 aa26.03■■□□□ 1.76
CHFR-217ENST00000540537 HHIPL2Q6UWX4 724 aa26.03■■□□□ 1.76
CHFR-217ENST00000540537 SLC10A4Q96EP9 437 aa26.03■■□□□ 1.76
CHFR-217ENST00000540537 TCP10L2B9ZVM9 353 aa26.02■■□□□ 1.76
CHFR-217ENST00000540537 USP2O75604 605 aaPredicted RBP26.02■■□□□ 1.76
CHFR-217ENST00000540537 MKRN3Q13064 507 aaKnown RBP26.02■■□□□ 1.76
CHFR-217ENST00000540537 TEPSINQ96N21 525 aa26.02■■□□□ 1.76
CHFR-217ENST00000540537 APOBEC3HQ6NTF7 200 aaKnown RBP26.01■■□□□ 1.75
CHFR-217ENST00000540537 TMEM57Q8N5G2 664 aa26.01■■□□□ 1.75
CHFR-217ENST00000540537 DENND2AQ9ULE3 1009 aa26.01■■□□□ 1.75
CHFR-217ENST00000540537 SALL1Q9NSC2 1324 aa26■■□□□ 1.75
CHFR-217ENST00000540537 ZBTB48P10074 688 aaPredicted RBP26■■□□□ 1.75
CHFR-217ENST00000540537 PHKA1P46020 1223 aa26■■□□□ 1.75
CHFR-217ENST00000540537 CLMNQ96JQ2 1002 aa26■■□□□ 1.75
CHFR-217ENST00000540537 MCOLN1Q9GZU1 580 aa26■■□□□ 1.75
CHFR-217ENST00000540537 TMEM39BQ9GZU3 492 aa26■■□□□ 1.75
CHFR-217ENST00000540537 TMOD2Q9NZR1 351 aa26■■□□□ 1.75
CHFR-217ENST00000540537 AKAP2Q9Y2D5 859 aa26■■□□□ 1.75
CHFR-217ENST00000540537 ADORA1P30542 326 aa25.99■■□□□ 1.75
CHFR-217ENST00000540537 FKBP1CQ5VVH2 108 aa25.99■■□□□ 1.75
CHFR-217ENST00000540537 ANKRD13AQ8IZ07 590 aa25.99■■□□□ 1.75
CHFR-217ENST00000540537 LAMB1P07942 1786 aa25.99■■□□□ 1.75
CHFR-217ENST00000540537 OTOFQ9HC10 1997 aa25.98■■□□□ 1.75
CHFR-217ENST00000540537 TFCP2Q12800 502 aa25.98■■□□□ 1.75
CHFR-217ENST00000540537 DGKZQ13574 1117 aa25.98■■□□□ 1.75
CHFR-217ENST00000540537 CCDC102BQ68D86 513 aa25.98■■□□□ 1.75
CHFR-217ENST00000540537 FAM83AQ86UY5 434 aa25.98■■□□□ 1.75
CHFR-217ENST00000540537 WNK4Q96J92 1243 aa25.98■■□□□ 1.75
CHFR-217ENST00000540537 MANSC4A6NHS7 340 aaPredicted RBP25.97■■□□□ 1.75
CHFR-217ENST00000540537 CACNB3P54284 484 aa25.97■■□□□ 1.75
CHFR-217ENST00000540537 CDAN1Q8IWY9 1227 aa25.97■■□□□ 1.75
CHFR-217ENST00000540537 PDS5AQ29RF7 1337 aaKnown RBP25.96■■□□□ 1.75
CHFR-217ENST00000540537 PNMA6EA0A0J9YXQ4 647 aa25.96■■□□□ 1.75
CHFR-217ENST00000540537 A0A1B0GUL7 405 aa25.96■■□□□ 1.75
CHFR-217ENST00000540537 LDHBP07195 334 aaKnown RBP25.96■■□□□ 1.75
CHFR-217ENST00000540537 PRDX5P30044 214 aa25.96■■□□□ 1.75
CHFR-217ENST00000540537 INHBEP58166 350 aa25.96■■□□□ 1.75
CHFR-217ENST00000540537 TIMM10P62072 90 aa25.96■■□□□ 1.75
CHFR-217ENST00000540537 FTSJ3Q8IY81 847 aaKnown RBP25.96■■□□□ 1.75
CHFR-217ENST00000540537 ZGPATQ8N5A5 531 aaKnown RBP25.95■■□□□ 1.74
CHFR-217ENST00000540537 CFHR5Q9BXR6 569 aa25.95■■□□□ 1.74
CHFR-217ENST00000540537 DAGLAQ9Y4D2 1042 aa25.95■■□□□ 1.74
CHFR-217ENST00000540537 RPAP1Q9BWH6 1393 aaPredicted RBP25.95■■□□□ 1.74
CHFR-217ENST00000540537 TBC1D8O95759 1140 aa25.94■■□□□ 1.74
CHFR-217ENST00000540537 ALDH1A1P00352 501 aa25.94■■□□□ 1.74
CHFR-217ENST00000540537 RASGRF1Q13972 1273 aa25.94■■□□□ 1.74
CHFR-217ENST00000540537 MVPQ14764 893 aaKnown RBP25.94■■□□□ 1.74
CHFR-217ENST00000540537 NOM1Q5C9Z4 860 aaKnown RBP25.94■■□□□ 1.74
CHFR-217ENST00000540537 XAGE2Q96GT9 111 aa25.94■■□□□ 1.74
CHFR-217ENST00000540537 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.94■■□□□ 1.74
CHFR-217ENST00000540537 G3BP1Q13283 466 aaKnown RBP eCLIP25.93■■□□□ 1.74
CHFR-217ENST00000540537 DIXDC1Q155Q3 683 aa25.93■■□□□ 1.74
CHFR-217ENST00000540537 HOOK2Q96ED9 719 aa25.93■■□□□ 1.74
CHFR-217ENST00000540537 GJA5P36382 358 aa25.92■■□□□ 1.74
CHFR-217ENST00000540537 POLA2Q14181 598 aa25.92■■□□□ 1.74
CHFR-217ENST00000540537 MAP3K9P80192 1104 aa25.91■■□□□ 1.74
CHFR-217ENST00000540537 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.91■■□□□ 1.74
CHFR-217ENST00000540537 IFNL1Q8IU54 200 aa25.91■■□□□ 1.74
CHFR-217ENST00000540537 ITPRIPQ8IWB1 547 aa25.91■■□□□ 1.74
CHFR-217ENST00000540537 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.91■■□□□ 1.74
CHFR-217ENST00000540537 ELP3Q9H9T3 547 aa25.91■■□□□ 1.74
CHFR-217ENST00000540537 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms