RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 TFRCP02786 760 aaKnown RBP12.51□□□□□ -0.41
PBX1-212ENST00000540236 COG3Q96JB2 828 aa12.51□□□□□ -0.41
PBX1-212ENST00000540236 PSDA5PKW4 1024 aaPredicted RBP12.51□□□□□ -0.41
PBX1-212ENST00000540236 IRF6O14896 467 aa12.51□□□□□ -0.41
PBX1-212ENST00000540236 CCNHP51946 323 aaPredicted RBP12.51□□□□□ -0.41
PBX1-212ENST00000540236 MTF1Q14872 753 aa12.51□□□□□ -0.41
PBX1-212ENST00000540236 CCDC43Q96MW1 224 aaKnown RBP12.51□□□□□ -0.41
PBX1-212ENST00000540236 PNKPQ96T60 521 aa12.51□□□□□ -0.41
PBX1-212ENST00000540236 COL17A1Q9UMD9 1497 aaPredicted RBP12.51□□□□□ -0.41
PBX1-212ENST00000540236 RGS12O14924 1447 aa12.51□□□□□ -0.41
PBX1-212ENST00000540236 CHRM1P11229 460 aaPredicted RBP12.51□□□□□ -0.41
PBX1-212ENST00000540236 CCDC40Q4G0X9 1142 aa12.51□□□□□ -0.41
PBX1-212ENST00000540236 NYAP1Q6ZVC0 841 aa12.51□□□□□ -0.41
PBX1-212ENST00000540236 ARMC9Q7Z3E5 817 aa12.51□□□□□ -0.41
PBX1-212ENST00000540236 TBC1D1Q86TI0 1168 aaPredicted RBP12.51□□□□□ -0.41
PBX1-212ENST00000540236 NEK1Q96PY6 1258 aa12.51□□□□□ -0.41
PBX1-212ENST00000540236 HDAC6Q9UBN7 1215 aa12.51□□□□□ -0.41
PBX1-212ENST00000540236 PA2G4Q9UQ80 394 aaKnown RBP12.51□□□□□ -0.41
PBX1-212ENST00000540236 IL17RAQ96F46 866 aa12.51□□□□□ -0.41
PBX1-212ENST00000540236 UBAC1Q9BSL1 405 aa12.51□□□□□ -0.41
PBX1-212ENST00000540236 MED4Q9NPJ6 270 aa12.51□□□□□ -0.41
PBX1-212ENST00000540236 EMILIN1Q9Y6C2 1016 aa12.51□□□□□ -0.41
PBX1-212ENST00000540236 SBNO1A3KN83 1393 aa12.51□□□□□ -0.41
PBX1-212ENST00000540236 PTPDC1A2A3K4 754 aa12.5□□□□□ -0.41
PBX1-212ENST00000540236 CHUKO15111 745 aa12.5□□□□□ -0.41
PBX1-212ENST00000540236 GUCY1A3Q02108 690 aa12.5□□□□□ -0.41
PBX1-212ENST00000540236 SAFBQ15424 915 aaKnown RBP eCLIP12.5□□□□□ -0.41
PBX1-212ENST00000540236 PPP1R42Q7Z4L9 355 aa12.5□□□□□ -0.41
PBX1-212ENST00000540236 PRAG1Q86YV5 1406 aa12.5□□□□□ -0.41
PBX1-212ENST00000540236 ATP11AP98196 1134 aa12.5□□□□□ -0.41
PBX1-212ENST00000540236 PDE1CQ14123 709 aaPredicted RBP12.5□□□□□ -0.41
PBX1-212ENST00000540236 G2E3Q7L622 706 aa12.5□□□□□ -0.41
PBX1-212ENST00000540236 SPDYE1Q8NFV5 336 aaPredicted RBP12.5□□□□□ -0.41
PBX1-212ENST00000540236 PGBD1Q96JS3 809 aa12.5□□□□□ -0.41
PBX1-212ENST00000540236 PHACTR3Q96KR7 559 aa12.5□□□□□ -0.41
PBX1-212ENST00000540236 CTNND2Q9UQB3 1225 aa12.5□□□□□ -0.41
PBX1-212ENST00000540236 ABCC11Q96J66 1382 aa12.5□□□□□ -0.41
PBX1-212ENST00000540236 PNMA6EA0A0J9YXQ4 647 aa12.5□□□□□ -0.41
PBX1-212ENST00000540236 MYL5Q02045 173 aa12.5□□□□□ -0.41
PBX1-212ENST00000540236 FLIIQ13045 1269 aa12.5□□□□□ -0.41
PBX1-212ENST00000540236 ZRSR2Q15696 482 aaKnown RBP12.5□□□□□ -0.41
PBX1-212ENST00000540236 CAPRIN2Q6IMN6 1127 aaKnown RBP12.5□□□□□ -0.41
PBX1-212ENST00000540236 PICK1Q9NRD5 415 aa12.5□□□□□ -0.41
PBX1-212ENST00000540236 ARHGAP6O43182 974 aa12.5□□□□□ -0.41
PBX1-212ENST00000540236 CKAP4Q07065 602 aaKnown RBP12.5□□□□□ -0.41
PBX1-212ENST00000540236 SH2D3CQ8N5H7 860 aa12.5□□□□□ -0.41
PBX1-212ENST00000540236 ANKS4BQ8N8V4 417 aa12.5□□□□□ -0.41
PBX1-212ENST00000540236 PARD3BQ8TEW8 1205 aa12.5□□□□□ -0.41
PBX1-212ENST00000540236 ETAA1Q9NY74 926 aa12.5□□□□□ -0.41
PBX1-212ENST00000540236 CXCR5P32302 372 aa12.5□□□□□ -0.41
PBX1-212ENST00000540236 PAFAH1B1P43034 410 aa12.5□□□□□ -0.41
PBX1-212ENST00000540236 C9orf84Q5VXU9 1444 aa12.5□□□□□ -0.41
PBX1-212ENST00000540236 CCDC50Q8IVM0 306 aa12.5□□□□□ -0.41
PBX1-212ENST00000540236 FBF1Q8TES7 1133 aa12.5□□□□□ -0.41
PBX1-212ENST00000540236 ANKRD18BA2A2Z9 1011 aa12.49□□□□□ -0.41
PBX1-212ENST00000540236 SPTLC2O15270 562 aa12.49□□□□□ -0.41
PBX1-212ENST00000540236 ZNF202O95125 648 aa12.49□□□□□ -0.41
PBX1-212ENST00000540236 CLIC6Q96NY7 704 aa12.49□□□□□ -0.41
PBX1-212ENST00000540236 POLR1AO95602 1720 aaPredicted RBP12.49□□□□□ -0.41
PBX1-212ENST00000540236 ABCA5Q8WWZ7 1642 aa12.49□□□□□ -0.41
PBX1-212ENST00000540236 TUBB4AP04350 444 aa12.49□□□□□ -0.41
PBX1-212ENST00000540236 UBXN1Q04323 297 aa12.49□□□□□ -0.41
PBX1-212ENST00000540236 SNX1Q13596 522 aa12.49□□□□□ -0.41
PBX1-212ENST00000540236 MFSD4BQ5TF39 518 aa12.49□□□□□ -0.41
PBX1-212ENST00000540236 ZSCAN16Q9H4T2 348 aaPredicted RBP12.49□□□□□ -0.41
PBX1-212ENST00000540236 CLIC4Q9Y696 253 aa12.49□□□□□ -0.41
PBX1-212ENST00000540236 TMED1Q13445 227 aa12.49□□□□□ -0.41
PBX1-212ENST00000540236 HIBCHQ6NVY1 386 aaPredicted RBP12.49□□□□□ -0.41
PBX1-212ENST00000540236 GOLGA8BA8MQT2 603 aa12.49□□□□□ -0.41
PBX1-212ENST00000540236 KLHL7Q8IXQ5 586 aa12.49□□□□□ -0.41
PBX1-212ENST00000540236 FUT8Q9BYC5 575 aa12.49□□□□□ -0.41
PBX1-212ENST00000540236 TRIM31Q9BZY9 425 aa12.49□□□□□ -0.41
PBX1-212ENST00000540236 MAEAQ7L5Y9 396 aa12.49□□□□□ -0.41
PBX1-212ENST00000540236 EPRSP07814 1512 aaKnown RBP12.48□□□□□ -0.41
PBX1-212ENST00000540236 DPF2Q92785 391 aa12.48□□□□□ -0.41
PBX1-212ENST00000540236 RBL2Q08999 1139 aa12.48□□□□□ -0.41
PBX1-212ENST00000540236 PRPF4BQ13523 1007 aaKnown RBP12.48□□□□□ -0.41
PBX1-212ENST00000540236 TAF11Q15544 211 aa12.48□□□□□ -0.41
PBX1-212ENST00000540236 NBPF6Q5VWK0 638 aa12.48□□□□□ -0.41
PBX1-212ENST00000540236 NBPF5PQ86XG9 351 aaPredicted RBP12.48□□□□□ -0.41
PBX1-212ENST00000540236 NBPF4Q96M43 638 aa12.48□□□□□ -0.41
PBX1-212ENST00000540236 RHBDL2Q9NX52 303 aa12.48□□□□□ -0.41
PBX1-212ENST00000540236 EXOC5O00471 708 aa12.48□□□□□ -0.41
PBX1-212ENST00000540236 MYL6BP14649 208 aa12.48□□□□□ -0.41
PBX1-212ENST00000540236 AMPHP49418 695 aa12.48□□□□□ -0.41
PBX1-212ENST00000540236 NNTQ13423 1086 aa12.48□□□□□ -0.41
PBX1-212ENST00000540236 CUL4AQ13619 759 aa12.48□□□□□ -0.41
PBX1-212ENST00000540236 INF2Q27J81 1249 aa12.48□□□□□ -0.41
PBX1-212ENST00000540236 MIEF2Q96C03 454 aa12.48□□□□□ -0.41
PBX1-212ENST00000540236 EID1Q9Y6B2 187 aa12.48□□□□□ -0.41
PBX1-212ENST00000540236 PZPP20742 1482 aa12.48□□□□□ -0.41
PBX1-212ENST00000540236 CADPSQ9ULU8 1353 aa12.48□□□□□ -0.41
PBX1-212ENST00000540236 SLC27A2O14975 620 aa12.48□□□□□ -0.41
PBX1-212ENST00000540236 SLC8A1P32418 973 aa12.48□□□□□ -0.41
PBX1-212ENST00000540236 WHAMMP3Q1A5X7 153 aa12.48□□□□□ -0.41
PBX1-212ENST00000540236 PDS5BQ9NTI5 1447 aa12.48□□□□□ -0.41
PBX1-212ENST00000540236 NPC1L1Q9UHC9 1359 aa12.48□□□□□ -0.41
PBX1-212ENST00000540236 UHMK1Q8TAS1 419 aaKnown RBP12.48□□□□□ -0.41
PBX1-212ENST00000540236 SELENOOQ9BVL4 669 aa12.48□□□□□ -0.41
PBX1-212ENST00000540236 SEPT11Q9NVA2 429 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms