RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 SCN9AQ15858 1988 aa22.86■■□□□ 1.25
TNFRSF1A-213ENST00000540022 LDHBP07195 334 aaKnown RBP22.85■■□□□ 1.25
TNFRSF1A-213ENST00000540022 PDE6AP16499 860 aa22.85■■□□□ 1.25
TNFRSF1A-213ENST00000540022 ADD2P35612 726 aa22.85■■□□□ 1.25
TNFRSF1A-213ENST00000540022 EIF6P56537 245 aaKnown RBP22.85■■□□□ 1.25
TNFRSF1A-213ENST00000540022 LRRFIP1Q32MZ4 808 aaKnown RBP22.85■■□□□ 1.25
TNFRSF1A-213ENST00000540022 TICAM2Q86XR7 235 aa22.85■■□□□ 1.25
TNFRSF1A-213ENST00000540022 ZNF384Q8TF68 577 aa22.85■■□□□ 1.25
TNFRSF1A-213ENST00000540022 FAM227BQ96M60 508 aa22.85■■□□□ 1.25
TNFRSF1A-213ENST00000540022 DIAPH3Q9NSV4 1193 aa22.85■■□□□ 1.25
TNFRSF1A-213ENST00000540022 HIP1O00291 1037 aa22.84■■□□□ 1.25
TNFRSF1A-213ENST00000540022 ZFYP08048 801 aaPredicted RBP22.84■■□□□ 1.25
TNFRSF1A-213ENST00000540022 FKBP1AP62942 108 aaKnown RBP22.84■■□□□ 1.25
TNFRSF1A-213ENST00000540022 MECOMQ03112 1051 aa22.84■■□□□ 1.25
TNFRSF1A-213ENST00000540022 FSTL1Q12841 308 aa22.84■■□□□ 1.25
TNFRSF1A-213ENST00000540022 NMIQ13287 307 aaPredicted RBP22.84■■□□□ 1.25
TNFRSF1A-213ENST00000540022 CIAPIN1Q6FI81 312 aa22.84■■□□□ 1.25
TNFRSF1A-213ENST00000540022 ZSCAN25Q6NSZ9 544 aa22.84■■□□□ 1.25
TNFRSF1A-213ENST00000540022 MAGEB6Q8N7X4 407 aa22.84■■□□□ 1.25
TNFRSF1A-213ENST00000540022 NSUN4Q96CB9 384 aaKnown RBP22.84■■□□□ 1.25
TNFRSF1A-213ENST00000540022 L3MBTL3Q96JM7 780 aaPredicted RBP22.84■■□□□ 1.25
TNFRSF1A-213ENST00000540022 ZBTB12Q9Y330 459 aaPredicted RBP22.84■■□□□ 1.25
TNFRSF1A-213ENST00000540022 GJA3Q9Y6H8 435 aa22.84■■□□□ 1.25
TNFRSF1A-213ENST00000540022 VIL1P09327 827 aaKnown RBP22.83■■□□□ 1.25
TNFRSF1A-213ENST00000540022 CWC27Q6UX04 472 aaKnown RBP22.83■■□□□ 1.25
TNFRSF1A-213ENST00000540022 ZNF532Q9HCE3 1301 aa22.83■■□□□ 1.25
TNFRSF1A-213ENST00000540022 A0A0D9SFI3 127 aa22.82■■□□□ 1.24
TNFRSF1A-213ENST00000540022 TCRBV5S4A2TA0A5A2 114 aa22.82■■□□□ 1.24
TNFRSF1A-213ENST00000540022 UBE3CQ15386 1083 aa22.82■■□□□ 1.24
TNFRSF1A-213ENST00000540022 ZMYM1Q5SVZ6 1142 aa22.82■■□□□ 1.24
TNFRSF1A-213ENST00000540022 CASC1Q6TDU7 716 aa22.82■■□□□ 1.24
TNFRSF1A-213ENST00000540022 SEC62Q99442 399 aaKnown RBP22.82■■□□□ 1.24
TNFRSF1A-213ENST00000540022 IL25Q9H293 177 aa22.82■■□□□ 1.24
TNFRSF1A-213ENST00000540022 SUGT1Q9Y2Z0 365 aa22.82■■□□□ 1.24
TNFRSF1A-213ENST00000540022 MYH13Q9UKX3 1938 aa22.82■■□□□ 1.24
TNFRSF1A-213ENST00000540022 RSBN1LQ6PCB5 846 aaPredicted RBP22.82■■□□□ 1.24
TNFRSF1A-213ENST00000540022 DZIP1Q86YF9 867 aaKnown RBP22.82■■□□□ 1.24
TNFRSF1A-213ENST00000540022 SMC1BQ8NDV3 1235 aa22.82■■□□□ 1.24
TNFRSF1A-213ENST00000540022 DOCK2Q92608 1830 aa22.81■■□□□ 1.24
TNFRSF1A-213ENST00000540022 IGSF3O75054 1194 aa22.81■■□□□ 1.24
TNFRSF1A-213ENST00000540022 CYP7A1P22680 504 aa22.81■■□□□ 1.24
TNFRSF1A-213ENST00000540022 NAA16Q6N069 864 aaPredicted RBP22.81■■□□□ 1.24
TNFRSF1A-213ENST00000540022 APPBP2Q92624 585 aa22.81■■□□□ 1.24
TNFRSF1A-213ENST00000540022 OSBP2Q969R2 916 aa22.81■■□□□ 1.24
TNFRSF1A-213ENST00000540022 ESYT1Q9BSJ8 1104 aa22.81■■□□□ 1.24
TNFRSF1A-213ENST00000540022 F8W031 263 aaPredicted RBP22.8■■□□□ 1.24
TNFRSF1A-213ENST00000540022 ADGRA1Q86SQ6 560 aa22.8■■□□□ 1.24
TNFRSF1A-213ENST00000540022 PUS7LQ9H0K6 701 aaKnown RBP22.8■■□□□ 1.24
TNFRSF1A-213ENST00000540022 ZNF646O15015 1829 aaPredicted RBP22.79■■□□□ 1.24
TNFRSF1A-213ENST00000540022 SHTN1A0MZ66 631 aa22.79■■□□□ 1.24
TNFRSF1A-213ENST00000540022 IQCA1LA6NCM1 817 aa22.79■■□□□ 1.24
TNFRSF1A-213ENST00000540022 TNIP1Q15025 636 aa22.79■■□□□ 1.24
TNFRSF1A-213ENST00000540022 DIXDC1Q155Q3 683 aa22.79■■□□□ 1.24
TNFRSF1A-213ENST00000540022 KIAA0825Q8IV33 1275 aa22.79■■□□□ 1.24
TNFRSF1A-213ENST00000540022 GPC2Q8N158 579 aa22.79■■□□□ 1.24
TNFRSF1A-213ENST00000540022 GMLQ99445 158 aa22.79■■□□□ 1.24
TNFRSF1A-213ENST00000540022 HELLSQ9NRZ9 838 aa22.79■■□□□ 1.24
TNFRSF1A-213ENST00000540022 TTF2Q9UNY4 1162 aaKnown RBP22.79■■□□□ 1.24
TNFRSF1A-213ENST00000540022 MYO3BQ8WXR4 1341 aa22.78■■□□□ 1.24
TNFRSF1A-213ENST00000540022 SGSM2O43147 1006 aa22.78■■□□□ 1.24
TNFRSF1A-213ENST00000540022 POTEIP0CG38 1075 aa22.78■■□□□ 1.24
TNFRSF1A-213ENST00000540022 POTEJP0CG39 1038 aa22.78■■□□□ 1.24
TNFRSF1A-213ENST00000540022 GMPSP49915 693 aaPredicted RBP22.78■■□□□ 1.24
TNFRSF1A-213ENST00000540022 RUFY2Q8WXA3 655 aa22.78■■□□□ 1.24
TNFRSF1A-213ENST00000540022 BACH2Q9BYV9 841 aa22.78■■□□□ 1.24
TNFRSF1A-213ENST00000540022 MAST3O60307 1309 aa22.78■■□□□ 1.24
TNFRSF1A-213ENST00000540022 MYO5AQ9Y4I1 1855 aaKnown RBP22.78■■□□□ 1.24
TNFRSF1A-213ENST00000540022 M0R2C6 588 aa22.77■■□□□ 1.24
TNFRSF1A-213ENST00000540022 SEC24BO95487 1268 aa22.77■■□□□ 1.24
TNFRSF1A-213ENST00000540022 APLP1P51693 650 aa22.77■■□□□ 1.24
TNFRSF1A-213ENST00000540022 MCMDC2Q4G0Z9 681 aa22.77■■□□□ 1.24
TNFRSF1A-213ENST00000540022 TAF1DQ9H5J8 278 aaPredicted RBP22.77■■□□□ 1.24
TNFRSF1A-213ENST00000540022 ADAMTSL1Q8N6G6 1762 aa22.77■■□□□ 1.24
TNFRSF1A-213ENST00000540022 AK9Q5TCS8 1911 aa22.77■■□□□ 1.24
TNFRSF1A-213ENST00000540022 SCNN1DP51172 638 aa22.77■■□□□ 1.24
TNFRSF1A-213ENST00000540022 GSTO1P78417 241 aa22.77■■□□□ 1.24
TNFRSF1A-213ENST00000540022 TMED8Q6PL24 325 aaPredicted RBP22.77■■□□□ 1.24
TNFRSF1A-213ENST00000540022 CCDC129Q6ZRS4 1044 aa22.77■■□□□ 1.24
TNFRSF1A-213ENST00000540022 ZNF589Q86UQ0 364 aaPredicted RBP22.77■■□□□ 1.24
TNFRSF1A-213ENST00000540022 RAD50Q92878 1312 aa22.76■■□□□ 1.23
TNFRSF1A-213ENST00000540022 MIGA1Q8NAN2 632 aa22.76■■□□□ 1.23
TNFRSF1A-213ENST00000540022 AGBL3Q8NEM8 1001 aa22.76■■□□□ 1.23
TNFRSF1A-213ENST00000540022 LDHCP07864 332 aa22.75■■□□□ 1.23
TNFRSF1A-213ENST00000540022 FAM163AQ96GL9 167 aaPredicted RBP22.75■■□□□ 1.23
TNFRSF1A-213ENST00000540022 HACL1Q9UJ83 578 aa22.75■■□□□ 1.23
TNFRSF1A-213ENST00000540022 PSME4Q14997 1843 aa22.74■■□□□ 1.23
TNFRSF1A-213ENST00000540022 MROH7-TTC4A0A0A0MT08 1334 aa22.74■■□□□ 1.23
TNFRSF1A-213ENST00000540022 GAKO14976 1311 aa22.74■■□□□ 1.23
TNFRSF1A-213ENST00000540022 GPAA1O43292 621 aa22.73■■□□□ 1.23
TNFRSF1A-213ENST00000540022 EPS15P42566 896 aa22.73■■□□□ 1.23
TNFRSF1A-213ENST00000540022 DYNLL1P63167 89 aaKnown RBP22.73■■□□□ 1.23
TNFRSF1A-213ENST00000540022 SLF2Q8IX21 1173 aa22.73■■□□□ 1.23
TNFRSF1A-213ENST00000540022 RIOK1Q9BRS2 568 aaKnown RBP22.73■■□□□ 1.23
TNFRSF1A-213ENST00000540022 MRIQ9BWK5 157 aa22.73■■□□□ 1.23
TNFRSF1A-213ENST00000540022 DAGLAQ9Y4D2 1042 aa22.73■■□□□ 1.23
TNFRSF1A-213ENST00000540022 MAST2Q6P0Q8 1798 aa22.73■■□□□ 1.23
TNFRSF1A-213ENST00000540022 CCDC171Q6TFL3 1326 aa22.73■■□□□ 1.23
TNFRSF1A-213ENST00000540022 MAGEB6P1A0A0J9YX57 407 aa22.72■■□□□ 1.23
TNFRSF1A-213ENST00000540022 MBD4O95243 580 aa22.72■■□□□ 1.23
TNFRSF1A-213ENST00000540022 RPS12P25398 132 aaKnown RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms