RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 LINC00301Q8NCQ3 95 aa16.42■□□□□ 0.22
UBE3B-210ENST00000539599 NCOA7Q8NI08 942 aa16.42■□□□□ 0.22
UBE3B-210ENST00000539599 ZNF396Q96N95 335 aaPredicted RBP16.42■□□□□ 0.22
UBE3B-210ENST00000539599 IQSEC3Q9UPP2 1182 aaPredicted RBP16.42■□□□□ 0.22
UBE3B-210ENST00000539599 NEDD4P46934 1319 aa16.42■□□□□ 0.22
UBE3B-210ENST00000539599 UBN2Q6ZU65 1347 aa16.42■□□□□ 0.22
UBE3B-210ENST00000539599 ABCC6O95255 1503 aa16.41■□□□□ 0.22
UBE3B-210ENST00000539599 WTIPA6NIX2 430 aaPredicted RBP16.41■□□□□ 0.22
UBE3B-210ENST00000539599 CTSWP56202 376 aa16.41■□□□□ 0.22
UBE3B-210ENST00000539599 STX1AQ16623 288 aa16.41■□□□□ 0.22
UBE3B-210ENST00000539599 FMR1NBQ8N0W7 255 aaPredicted RBP16.41■□□□□ 0.22
UBE3B-210ENST00000539599 CMTR1Q8N1G2 835 aaKnown RBP16.41■□□□□ 0.22
UBE3B-210ENST00000539599 ZNF592Q92610 1267 aa16.41■□□□□ 0.22
UBE3B-210ENST00000539599 MROH7-TTC4A0A0A0MT08 1334 aa16.41■□□□□ 0.22
UBE3B-210ENST00000539599 CCDC102BQ68D86 513 aa16.41■□□□□ 0.22
UBE3B-210ENST00000539599 ZKSCAN3Q9BRR0 538 aa16.41■□□□□ 0.22
UBE3B-210ENST00000539599 SEC31BQ9NQW1 1179 aa16.41■□□□□ 0.22
UBE3B-210ENST00000539599 WDHD1O75717 1129 aaPredicted RBP16.4■□□□□ 0.22
UBE3B-210ENST00000539599 ADD2P35612 726 aa16.4■□□□□ 0.22
UBE3B-210ENST00000539599 FBXO18Q8NFZ0 1043 aa16.4■□□□□ 0.22
UBE3B-210ENST00000539599 MRPS27Q92552 414 aaKnown RBP16.4■□□□□ 0.22
UBE3B-210ENST00000539599 TRMT1Q9NXH9 659 aaKnown RBP16.4■□□□□ 0.22
UBE3B-210ENST00000539599 PAPPAQ13219 1627 aa16.4■□□□□ 0.22
UBE3B-210ENST00000539599 PRKAB2O43741 272 aa16.4■□□□□ 0.22
UBE3B-210ENST00000539599 MYSM1Q5VVJ2 828 aa16.4■□□□□ 0.22
UBE3B-210ENST00000539599 GOLGB1Q14789 3259 aaKnown RBP16.4■□□□□ 0.22
UBE3B-210ENST00000539599 ANKRD18BA2A2Z9 1011 aa16.39■□□□□ 0.21
UBE3B-210ENST00000539599 STARD3NLO95772 234 aa16.39■□□□□ 0.21
UBE3B-210ENST00000539599 VGLL2Q8N8G2 317 aa16.39■□□□□ 0.21
UBE3B-210ENST00000539599 PRIMPOLQ96LW4 560 aa16.39■□□□□ 0.21
UBE3B-210ENST00000539599 CTNNA3Q9UI47 895 aa16.39■□□□□ 0.21
UBE3B-210ENST00000539599 KIF3AQ9Y496 699 aa16.39■□□□□ 0.21
UBE3B-210ENST00000539599 SPECC1Q5M775 1068 aa16.39■□□□□ 0.21
UBE3B-210ENST00000539599 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.39■□□□□ 0.21
UBE3B-210ENST00000539599 CLIC6Q96NY7 704 aa16.39■□□□□ 0.21
UBE3B-210ENST00000539599 AKAP11Q9UKA4 1901 aa16.38■□□□□ 0.21
UBE3B-210ENST00000539599 CYP19A1P11511 503 aaPredicted RBP16.38■□□□□ 0.21
UBE3B-210ENST00000539599 PDE6AP16499 860 aa16.38■□□□□ 0.21
UBE3B-210ENST00000539599 KIF23Q02241 960 aaPredicted RBP16.38■□□□□ 0.21
UBE3B-210ENST00000539599 ZMYND15Q9H091 742 aa16.38■□□□□ 0.21
UBE3B-210ENST00000539599 ARMT1Q9H993 441 aa16.38■□□□□ 0.21
UBE3B-210ENST00000539599 SPTLC2O15270 562 aa16.38■□□□□ 0.21
UBE3B-210ENST00000539599 RRP12Q5JTH9 1297 aaKnown RBP16.38■□□□□ 0.21
UBE3B-210ENST00000539599 EPB41L4AQ9HCS5 686 aaPredicted RBP16.38■□□□□ 0.21
UBE3B-210ENST00000539599 RTEL1Q9NZ71 1219 aa16.38■□□□□ 0.21
UBE3B-210ENST00000539599 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.38■□□□□ 0.21
UBE3B-210ENST00000539599 SMIM5Q71RC9 77 aa16.38■□□□□ 0.21
UBE3B-210ENST00000539599 ACSBG1Q96GR2 724 aa16.38■□□□□ 0.21
UBE3B-210ENST00000539599 PDE8BO95263 885 aa16.37■□□□□ 0.21
UBE3B-210ENST00000539599 ZFYP08048 801 aaPredicted RBP16.37■□□□□ 0.21
UBE3B-210ENST00000539599 TNNT1P13805 278 aa16.37■□□□□ 0.21
UBE3B-210ENST00000539599 METAP2P50579 478 aaKnown RBP eCLIP16.37■□□□□ 0.21
UBE3B-210ENST00000539599 EVCP57679 992 aa16.37■□□□□ 0.21
UBE3B-210ENST00000539599 TPD52L1Q16890 204 aaPredicted RBP16.37■□□□□ 0.21
UBE3B-210ENST00000539599 HSP90AA4PQ58FG1 418 aa16.37■□□□□ 0.21
UBE3B-210ENST00000539599 DZIP3Q86Y13 1208 aaKnown RBP16.37■□□□□ 0.21
UBE3B-210ENST00000539599 MAGEB6Q8N7X4 407 aa16.37■□□□□ 0.21
UBE3B-210ENST00000539599 ALG1Q9BT22 464 aa16.37■□□□□ 0.21
UBE3B-210ENST00000539599 RANBP6O60518 1105 aaKnown RBP16.37■□□□□ 0.21
UBE3B-210ENST00000539599 TRIM28Q13263 835 aaKnown RBP16.37■□□□□ 0.21
UBE3B-210ENST00000539599 GLIPR1L2Q4G1C9 344 aa16.37■□□□□ 0.21
UBE3B-210ENST00000539599 ADALQ6DHV7 355 aa16.37■□□□□ 0.21
UBE3B-210ENST00000539599 LRRC8AQ8IWT6 810 aa16.37■□□□□ 0.21
UBE3B-210ENST00000539599 MIGA1Q8NAN2 632 aa16.37■□□□□ 0.21
UBE3B-210ENST00000539599 TOMM22Q9NS69 142 aa16.37■□□□□ 0.21
UBE3B-210ENST00000539599 SLIT2O94813 1529 aa16.36■□□□□ 0.21
UBE3B-210ENST00000539599 SPDYE4A6NLX3 237 aa16.36■□□□□ 0.21
UBE3B-210ENST00000539599 PFKFB1P16118 471 aa16.36■□□□□ 0.21
UBE3B-210ENST00000539599 GUCY1A2P33402 732 aa16.36■□□□□ 0.21
UBE3B-210ENST00000539599 NFXL1Q6ZNB6 911 aa16.36■□□□□ 0.21
UBE3B-210ENST00000539599 PLA2G12BQ9BX93 195 aa16.36■□□□□ 0.21
UBE3B-210ENST00000539599 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.36■□□□□ 0.21
UBE3B-210ENST00000539599 V9GYY5 206 aaPredicted RBP16.36■□□□□ 0.21
UBE3B-210ENST00000539599 MBD4O95243 580 aa16.36■□□□□ 0.21
UBE3B-210ENST00000539599 RASGRF1Q13972 1273 aa16.36■□□□□ 0.21
UBE3B-210ENST00000539599 VPS37DQ86XT2 251 aa16.36■□□□□ 0.21
UBE3B-210ENST00000539599 CCDC69A6NI79 296 aa16.35■□□□□ 0.21
UBE3B-210ENST00000539599 SH2B2O14492 632 aaPredicted RBP16.35■□□□□ 0.21
UBE3B-210ENST00000539599 ZNF202O95125 648 aa16.35■□□□□ 0.21
UBE3B-210ENST00000539599 TRDNQ13061 729 aa16.35■□□□□ 0.21
UBE3B-210ENST00000539599 AXDND1Q5T1B0 1012 aaPredicted RBP16.35■□□□□ 0.21
UBE3B-210ENST00000539599 ANO1Q5XXA6 986 aa16.35■□□□□ 0.21
UBE3B-210ENST00000539599 APOA5Q6Q788 366 aa16.35■□□□□ 0.21
UBE3B-210ENST00000539599 SYNE3Q6ZMZ3 975 aa16.35■□□□□ 0.21
UBE3B-210ENST00000539599 NBPF11Q86T75 865 aa16.35■□□□□ 0.21
UBE3B-210ENST00000539599 AIDAQ96BJ3 306 aa16.35■□□□□ 0.21
UBE3B-210ENST00000539599 ANO10Q9NW15 660 aa16.35■□□□□ 0.21
UBE3B-210ENST00000539599 ANGEL1Q9UNK9 670 aaKnown RBP16.35■□□□□ 0.21
UBE3B-210ENST00000539599 BCAMP50895 628 aa16.35■□□□□ 0.21
UBE3B-210ENST00000539599 GOLGA8FQ08AF8 430 aa16.35■□□□□ 0.21
UBE3B-210ENST00000539599 GOLGA8DPQ0D2H9 430 aa16.35■□□□□ 0.21
UBE3B-210ENST00000539599 KRT40Q6A162 431 aa16.35■□□□□ 0.21
UBE3B-210ENST00000539599 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.35■□□□□ 0.21
UBE3B-210ENST00000539599 TCRBV5S4A2TA0A5A2 114 aa16.34■□□□□ 0.21
UBE3B-210ENST00000539599 SMC2O95347 1197 aa16.34■□□□□ 0.21
UBE3B-210ENST00000539599 TPM3P06753 285 aa16.34■□□□□ 0.21
UBE3B-210ENST00000539599 ATP1A3P13637 1013 aa16.34■□□□□ 0.21
UBE3B-210ENST00000539599 CBX1P83916 185 aa16.34■□□□□ 0.21
UBE3B-210ENST00000539599 SUSD4Q5VX71 490 aa16.34■□□□□ 0.21
UBE3B-210ENST00000539599 CEP57L1Q8IYX8 460 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms