RNA–Protein interactions for RNA: ENST00000539426.5

DDB1-214, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-214ENST00000539426 ALDH1A1P00352 501 aa13.71□□□□□ -0.21
DDB1-214ENST00000539426 CRKP46108 304 aa13.71□□□□□ -0.21
DDB1-214ENST00000539426 IREB2P48200 963 aaKnown RBP13.71□□□□□ -0.21
DDB1-214ENST00000539426 DZIP1LQ8IYY4 767 aaKnown RBP13.71□□□□□ -0.21
DDB1-214ENST00000539426 KLHDC4Q8TBB5 520 aa13.71□□□□□ -0.21
DDB1-214ENST00000539426 TCP10L2B9ZVM9 353 aa13.7□□□□□ -0.22
DDB1-214ENST00000539426 INHBEP58166 350 aa13.7□□□□□ -0.22
DDB1-214ENST00000539426 CHAF1AQ13111 956 aaPredicted RBP13.7□□□□□ -0.22
DDB1-214ENST00000539426 TNFAIP1Q13829 316 aa13.7□□□□□ -0.22
DDB1-214ENST00000539426 METTL24Q5JXM2 366 aa13.7□□□□□ -0.22
DDB1-214ENST00000539426 SSH1Q8WYL5 1049 aa13.7□□□□□ -0.22
DDB1-214ENST00000539426 TMEM39BQ9GZU3 492 aa13.7□□□□□ -0.22
DDB1-214ENST00000539426 MKI67P46013 3256 aaKnown RBP13.69□□□□□ -0.22
DDB1-214ENST00000539426 VPS37DQ86XT2 251 aa13.69□□□□□ -0.22
DDB1-214ENST00000539426 ANKRD13AQ8IZ07 590 aa13.69□□□□□ -0.22
DDB1-214ENST00000539426 CNKSR2Q8WXI2 1034 aa13.69□□□□□ -0.22
DDB1-214ENST00000539426 PTPN18Q99952 460 aa13.69□□□□□ -0.22
DDB1-214ENST00000539426 USP44Q9H0E7 712 aa13.69□□□□□ -0.22
DDB1-214ENST00000539426 ELP3Q9H9T3 547 aa13.69□□□□□ -0.22
DDB1-214ENST00000539426 PTPRCP08575 1304 aa13.68□□□□□ -0.22
DDB1-214ENST00000539426 BRCA2P51587 3418 aa13.68□□□□□ -0.22
DDB1-214ENST00000539426 PDE8BO95263 885 aa13.68□□□□□ -0.22
DDB1-214ENST00000539426 BCAMP50895 628 aa13.68□□□□□ -0.22
DDB1-214ENST00000539426 CAP1Q01518 475 aa13.68□□□□□ -0.22
DDB1-214ENST00000539426 CRHR2Q13324 411 aa13.68□□□□□ -0.22
DDB1-214ENST00000539426 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.68□□□□□ -0.22
DDB1-214ENST00000539426 OTOP1Q7RTM1 612 aa13.68□□□□□ -0.22
DDB1-214ENST00000539426 OPTNQ96CV9 577 aa13.68□□□□□ -0.22
DDB1-214ENST00000539426 TRIM17Q9Y577 477 aa13.68□□□□□ -0.22
DDB1-214ENST00000539426 TESPA1A2RU30 521 aaPredicted RBP13.67□□□□□ -0.22
DDB1-214ENST00000539426 E9PSI1 815 aa13.67□□□□□ -0.22
DDB1-214ENST00000539426 RFX5P48382 616 aaPredicted RBP13.67□□□□□ -0.22
DDB1-214ENST00000539426 CACNB3P54284 484 aa13.67□□□□□ -0.22
DDB1-214ENST00000539426 MS4A4AQ96JQ5 239 aa13.67□□□□□ -0.22
DDB1-214ENST00000539426 CEP290O15078 2479 aa13.66□□□□□ -0.22
DDB1-214ENST00000539426 FRAT2O75474 233 aaPredicted RBP13.66□□□□□ -0.22
DDB1-214ENST00000539426 FGFR2P21802 821 aa13.66□□□□□ -0.22
DDB1-214ENST00000539426 HDLBPQ00341 1268 aaKnown RBP13.66□□□□□ -0.22
DDB1-214ENST00000539426 SLFN5Q08AF3 891 aa13.66□□□□□ -0.22
DDB1-214ENST00000539426 VGLL4Q14135 290 aa13.66□□□□□ -0.22
DDB1-214ENST00000539426 CAVIN4Q5BKX8 364 aa13.66□□□□□ -0.22
DDB1-214ENST00000539426 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.66□□□□□ -0.22
DDB1-214ENST00000539426 CD99L2Q8TCZ2 262 aa13.66□□□□□ -0.22
DDB1-214ENST00000539426 TBC1D22AQ8WUA7 517 aa13.66□□□□□ -0.22
DDB1-214ENST00000539426 TNNI2P48788 182 aa13.65□□□□□ -0.22
DDB1-214ENST00000539426 MAP3K9P80192 1104 aa13.65□□□□□ -0.22
DDB1-214ENST00000539426 PUM3Q15397 648 aaKnown RBP13.65□□□□□ -0.22
DDB1-214ENST00000539426 APOBEC3HQ6NTF7 200 aaKnown RBP13.65□□□□□ -0.22
DDB1-214ENST00000539426 BRI3BPQ8WY22 251 aa13.65□□□□□ -0.22
DDB1-214ENST00000539426 TEKT1Q969V4 418 aa13.65□□□□□ -0.22
DDB1-214ENST00000539426 CDCA7LQ96GN5 454 aa13.65□□□□□ -0.22
DDB1-214ENST00000539426 RBBP6Q7Z6E9 1792 aaKnown RBP13.65□□□□□ -0.22
DDB1-214ENST00000539426 KIF16BQ96L93 1317 aa13.64□□□□□ -0.23
DDB1-214ENST00000539426 ZSWIM8A7E2V4 1837 aa13.64□□□□□ -0.23
DDB1-214ENST00000539426 AK9Q5TCS8 1911 aa13.64□□□□□ -0.23
DDB1-214ENST00000539426 EYA2O00167 538 aa13.64□□□□□ -0.23
DDB1-214ENST00000539426 PRPF38BQ5VTL8 546 aaKnown RBP13.64□□□□□ -0.23
DDB1-214ENST00000539426 OTUD7BQ6GQQ9 843 aa13.64□□□□□ -0.23
DDB1-214ENST00000539426 ERO1AQ96HE7 468 aa13.64□□□□□ -0.23
DDB1-214ENST00000539426 ZDHHC15Q96MV8 337 aa13.64□□□□□ -0.23
DDB1-214ENST00000539426 CCL15-CCL14A0A0B4J2E2 113 aa13.63□□□□□ -0.23
DDB1-214ENST00000539426 IFIT1P09914 478 aaKnown RBP13.63□□□□□ -0.23
DDB1-214ENST00000539426 SP3Q02447 781 aa13.63□□□□□ -0.23
DDB1-214ENST00000539426 CCL15Q16663 113 aa13.63□□□□□ -0.23
DDB1-214ENST00000539426 ATG9AQ7Z3C6 839 aa13.63□□□□□ -0.23
DDB1-214ENST00000539426 OTUD5Q96G74 571 aa13.63□□□□□ -0.23
DDB1-214ENST00000539426 MRIQ9BWK5 157 aa13.63□□□□□ -0.23
DDB1-214ENST00000539426 PTPN22Q9Y2R2 807 aa13.63□□□□□ -0.23
DDB1-214ENST00000539426 SNCAIPQ9Y6H5 919 aa13.63□□□□□ -0.23
DDB1-214ENST00000539426 RPAP1Q9BWH6 1393 aaPredicted RBP13.62□□□□□ -0.23
DDB1-214ENST00000539426 POTEFA5A3E0 1075 aa13.62□□□□□ -0.23
DDB1-214ENST00000539426 SLC5A1P13866 664 aa13.62□□□□□ -0.23
DDB1-214ENST00000539426 GTF2A2P52657 109 aa13.62□□□□□ -0.23
DDB1-214ENST00000539426 TAF1CQ15572 869 aaPredicted RBP13.62□□□□□ -0.23
DDB1-214ENST00000539426 ALDH1L2Q3SY69 923 aa13.62□□□□□ -0.23
DDB1-214ENST00000539426 FAM43AQ8N2R8 423 aa13.62□□□□□ -0.23
DDB1-214ENST00000539426 EFCC1Q9HA90 598 aa13.62□□□□□ -0.23
DDB1-214ENST00000539426 SMC4Q9NTJ3 1288 aa13.62□□□□□ -0.23
DDB1-214ENST00000539426 SUGT1Q9Y2Z0 365 aa13.62□□□□□ -0.23
DDB1-214ENST00000539426 CSADQ9Y600 493 aa13.62□□□□□ -0.23
DDB1-214ENST00000539426 MAST3O60307 1309 aa13.62□□□□□ -0.23
DDB1-214ENST00000539426 SPDYE5A6NIY4 337 aa13.61□□□□□ -0.23
DDB1-214ENST00000539426 FKBP1CQ5VVH2 108 aa13.61□□□□□ -0.23
DDB1-214ENST00000539426 HHIPL2Q6UWX4 724 aa13.61□□□□□ -0.23
DDB1-214ENST00000539426 FAM83AQ86UY5 434 aa13.61□□□□□ -0.23
DDB1-214ENST00000539426 LPIN2Q92539 896 aa13.61□□□□□ -0.23
DDB1-214ENST00000539426 ZKSCAN4Q969J2 545 aaPredicted RBP13.61□□□□□ -0.23
DDB1-214ENST00000539426 WRNIP1Q96S55 665 aa13.61□□□□□ -0.23
DDB1-214ENST00000539426 SIL1Q9H173 461 aa13.61□□□□□ -0.23
DDB1-214ENST00000539426 TMOD2Q9NZR1 351 aa13.61□□□□□ -0.23
DDB1-214ENST00000539426 DAGLAQ9Y4D2 1042 aa13.61□□□□□ -0.23
DDB1-214ENST00000539426 MYH2Q9UKX2 1941 aa13.6□□□□□ -0.23
DDB1-214ENST00000539426 DIXDC1Q155Q3 683 aa13.6□□□□□ -0.23
DDB1-214ENST00000539426 TRMT2AQ8IZ69 625 aaKnown RBP13.6□□□□□ -0.23
DDB1-214ENST00000539426 WDR66Q8TBY9 1149 aa13.6□□□□□ -0.23
DDB1-214ENST00000539426 ARMC5Q96C12 935 aa13.6□□□□□ -0.23
DDB1-214ENST00000539426 IRF6O14896 467 aa13.59□□□□□ -0.23
DDB1-214ENST00000539426 UBTFL1P0CB47 393 aaPredicted RBP13.59□□□□□ -0.23
DDB1-214ENST00000539426 PRDX5P30044 214 aa13.59□□□□□ -0.23
DDB1-214ENST00000539426 INTS3Q68E01 1043 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms