RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 NEK1Q96PY6 1258 aa13.24□□□□□ -0.29
CTCFL-212ENST00000539382 NBPF3Q9H094 633 aa13.24□□□□□ -0.29
CTCFL-212ENST00000539382 E7EWF7 191 aa13.24□□□□□ -0.29
CTCFL-212ENST00000539382 PRKAB2O43741 272 aa13.24□□□□□ -0.29
CTCFL-212ENST00000539382 CHAF1AQ13111 956 aaPredicted RBP13.24□□□□□ -0.29
CTCFL-212ENST00000539382 SF3B2Q13435 895 aaKnown RBP13.24□□□□□ -0.29
CTCFL-212ENST00000539382 TOB2Q14106 344 aaPredicted RBP13.24□□□□□ -0.29
CTCFL-212ENST00000539382 HOMEZQ8IX15 550 aa13.24□□□□□ -0.29
CTCFL-212ENST00000539382 LCORLQ8N3X6 602 aa13.24□□□□□ -0.29
CTCFL-212ENST00000539382 RAI14Q9P0K7 980 aa13.24□□□□□ -0.29
CTCFL-212ENST00000539382 TPCN1Q9ULQ1 816 aa13.24□□□□□ -0.29
CTCFL-212ENST00000539382 CACNA1SQ13698 1873 aa13.24□□□□□ -0.29
CTCFL-212ENST00000539382 PPEF1O14829 653 aaPredicted RBP13.23□□□□□ -0.29
CTCFL-212ENST00000539382 CYP7A1P22680 504 aa13.23□□□□□ -0.29
CTCFL-212ENST00000539382 PRDX5P30044 214 aa13.23□□□□□ -0.29
CTCFL-212ENST00000539382 ST3GAL1Q11201 340 aa13.23□□□□□ -0.29
CTCFL-212ENST00000539382 KLHL34Q8N239 644 aa13.23□□□□□ -0.29
CTCFL-212ENST00000539382 TBC1D16Q8TBP0 767 aa13.23□□□□□ -0.29
CTCFL-212ENST00000539382 AIDAQ96BJ3 306 aa13.23□□□□□ -0.29
CTCFL-212ENST00000539382 EPB41L4AQ9HCS5 686 aaPredicted RBP13.23□□□□□ -0.29
CTCFL-212ENST00000539382 PODXL2Q9NZ53 605 aa13.23□□□□□ -0.29
CTCFL-212ENST00000539382 LIMCH1Q9UPQ0 1083 aa13.23□□□□□ -0.29
CTCFL-212ENST00000539382 LTBP1Q14766 1721 aa13.23□□□□□ -0.29
CTCFL-212ENST00000539382 SEMA3EO15041 775 aa13.23□□□□□ -0.29
CTCFL-212ENST00000539382 NPR1P16066 1061 aa13.23□□□□□ -0.29
CTCFL-212ENST00000539382 PDE6BP35913 854 aa13.23□□□□□ -0.29
CTCFL-212ENST00000539382 GRIK5Q16478 980 aa13.23□□□□□ -0.29
CTCFL-212ENST00000539382 TDRD7Q8NHU6 1098 aaKnown RBP13.23□□□□□ -0.29
CTCFL-212ENST00000539382 LRRC2Q9BYS8 371 aa13.23□□□□□ -0.29
CTCFL-212ENST00000539382 ATP6V0A2Q9Y487 856 aa13.23□□□□□ -0.29
CTCFL-212ENST00000539382 KRT32Q14532 448 aa13.22□□□□□ -0.29
CTCFL-212ENST00000539382 ME3Q16798 604 aa13.22□□□□□ -0.29
CTCFL-212ENST00000539382 C15orf52Q6ZUT6 534 aaKnown RBP13.22□□□□□ -0.29
CTCFL-212ENST00000539382 SP8Q8IXZ3 490 aa13.22□□□□□ -0.29
CTCFL-212ENST00000539382 GGA1Q9UJY5 639 aa13.22□□□□□ -0.29
CTCFL-212ENST00000539382 LAMA4Q16363 1823 aa13.22□□□□□ -0.29
CTCFL-212ENST00000539382 LRRC37AA6NMS7 1700 aa13.22□□□□□ -0.29
CTCFL-212ENST00000539382 GSG1L2A8MUP6 293 aa13.22□□□□□ -0.29
CTCFL-212ENST00000539382 APPP05067 770 aa13.22□□□□□ -0.29
CTCFL-212ENST00000539382 ATP2B4P23634 1241 aa13.22□□□□□ -0.29
CTCFL-212ENST00000539382 CHRNA5P30532 468 aa13.22□□□□□ -0.29
CTCFL-212ENST00000539382 MECOMQ03112 1051 aa13.22□□□□□ -0.29
CTCFL-212ENST00000539382 CHST3Q7LGC8 479 aa13.22□□□□□ -0.29
CTCFL-212ENST00000539382 NSUN4Q96CB9 384 aaKnown RBP13.22□□□□□ -0.29
CTCFL-212ENST00000539382 CIZ1Q9ULV3 898 aaPredicted RBP13.22□□□□□ -0.29
CTCFL-212ENST00000539382 PDS5AQ29RF7 1337 aaKnown RBP13.21□□□□□ -0.29
CTCFL-212ENST00000539382 GSE1Q14687 1217 aa13.21□□□□□ -0.29
CTCFL-212ENST00000539382 RAB3GAP1Q15042 981 aa13.21□□□□□ -0.29
CTCFL-212ENST00000539382 NECAB1Q8N987 351 aa13.21□□□□□ -0.29
CTCFL-212ENST00000539382 MASTLQ96GX5 879 aa13.21□□□□□ -0.29
CTCFL-212ENST00000539382 QSER1Q2KHR3 1735 aa13.21□□□□□ -0.3
CTCFL-212ENST00000539382 PATL2C9JE40 543 aaKnown RBP13.2□□□□□ -0.3
CTCFL-212ENST00000539382 DYNLL1P63167 89 aaKnown RBP13.2□□□□□ -0.3
CTCFL-212ENST00000539382 EXOSC10Q01780 885 aaKnown RBP13.2□□□□□ -0.3
CTCFL-212ENST00000539382 C2CD5Q86YS7 1000 aa13.2□□□□□ -0.3
CTCFL-212ENST00000539382 IFNL3Q8IZI9 196 aa13.2□□□□□ -0.3
CTCFL-212ENST00000539382 IL27Q8NEV9 243 aa13.2□□□□□ -0.3
CTCFL-212ENST00000539382 TNPO1Q92973 898 aaKnown RBP13.2□□□□□ -0.3
CTCFL-212ENST00000539382 ZNF622Q969S3 477 aaKnown RBP eCLIP13.2□□□□□ -0.33e-23■□□□□ 9.7
CTCFL-212ENST00000539382 INTS4Q96HW7 963 aaKnown RBP13.2□□□□□ -0.3
CTCFL-212ENST00000539382 RIOK1Q9BRS2 568 aaKnown RBP13.2□□□□□ -0.3
CTCFL-212ENST00000539382 ALDH8A1Q9H2A2 487 aaPredicted RBP13.2□□□□□ -0.3
CTCFL-212ENST00000539382 CD209Q9NNX6 404 aa13.2□□□□□ -0.3
CTCFL-212ENST00000539382 INCENPQ9NQS7 918 aa13.2□□□□□ -0.3
CTCFL-212ENST00000539382 CTNNA3Q9UI47 895 aa13.2□□□□□ -0.3
CTCFL-212ENST00000539382 ZDHHC9Q9Y397 364 aa13.2□□□□□ -0.3
CTCFL-212ENST00000539382 TACC3Q9Y6A5 838 aa13.2□□□□□ -0.3
CTCFL-212ENST00000539382 MYH13Q9UKX3 1938 aa13.2□□□□□ -0.3
CTCFL-212ENST00000539382 C6orf229H3BNL8 230 aa13.2□□□□□ -0.3
CTCFL-212ENST00000539382 SMIM22K7EJ46 135 aa13.2□□□□□ -0.3
CTCFL-212ENST00000539382 IMMTQ16891 758 aaKnown RBP13.2□□□□□ -0.3
CTCFL-212ENST00000539382 Q6ZUG5 572 aa13.2□□□□□ -0.3
CTCFL-212ENST00000539382 TBC1D10CQ8IV04 446 aa13.2□□□□□ -0.3
CTCFL-212ENST00000539382 SDR42E1Q8WUS8 393 aa13.2□□□□□ -0.3
CTCFL-212ENST00000539382 DUOX1Q9NRD9 1551 aa13.2□□□□□ -0.3
CTCFL-212ENST00000539382 ZNF213O14771 459 aa13.19□□□□□ -0.3
CTCFL-212ENST00000539382 ALDH1B1P30837 517 aa13.19□□□□□ -0.3
CTCFL-212ENST00000539382 NAA16Q6N069 864 aaPredicted RBP13.19□□□□□ -0.3
CTCFL-212ENST00000539382 DHX32Q7L7V1 743 aaKnown RBP13.19□□□□□ -0.3
CTCFL-212ENST00000539382 ZNF804AQ7Z570 1209 aa13.19□□□□□ -0.3
CTCFL-212ENST00000539382 CWC22Q9HCG8 908 aaKnown RBP13.19□□□□□ -0.3
CTCFL-212ENST00000539382 GPHNQ9NQX3 736 aaPredicted RBP13.19□□□□□ -0.3
CTCFL-212ENST00000539382 CCDC83Q8IWF9 413 aa13.19□□□□□ -0.3
CTCFL-212ENST00000539382 SLC4A4Q9Y6R1 1079 aa13.19□□□□□ -0.3
CTCFL-212ENST00000539382 MAGEB6P1A0A0J9YX57 407 aa13.18□□□□□ -0.3
CTCFL-212ENST00000539382 RIMBP2O15034 1052 aa13.18□□□□□ -0.3
CTCFL-212ENST00000539382 IL1R1P14778 569 aa13.18□□□□□ -0.3
CTCFL-212ENST00000539382 ALX1Q15699 326 aa13.18□□□□□ -0.3
CTCFL-212ENST00000539382 TMC4Q7Z404 712 aa13.18□□□□□ -0.3
CTCFL-212ENST00000539382 H0YIN7 160 aa13.18□□□□□ -0.3
CTCFL-212ENST00000539382 BRF1Q92994 677 aa13.18□□□□□ -0.3
CTCFL-212ENST00000539382 SLX4Q8IY92 1834 aa13.18□□□□□ -0.3
CTCFL-212ENST00000539382 ANTXR2P58335 489 aa13.17□□□□□ -0.3
CTCFL-212ENST00000539382 STK3Q13188 491 aa13.17□□□□□ -0.3
CTCFL-212ENST00000539382 MB21D2Q8IYB1 491 aaPredicted RBP13.17□□□□□ -0.3
CTCFL-212ENST00000539382 MPNDQ8N594 471 aa13.17□□□□□ -0.3
CTCFL-212ENST00000539382 AGXT2Q9BYV1 514 aa13.17□□□□□ -0.3
CTCFL-212ENST00000539382 SALL1Q9NSC2 1324 aa13.17□□□□□ -0.3
CTCFL-212ENST00000539382 CHD4Q14839 1912 aa13.17□□□□□ -0.3
CTCFL-212ENST00000539382 HMGB1P09429 215 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms