RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 A0A1B0GVL5 298 aa16.53■□□□□ 0.24
CACNB1-206ENST00000539338 ZFP91Q96JP5 570 aaPredicted RBP16.53■□□□□ 0.24
CACNB1-206ENST00000539338 MAGEB6P1A0A0J9YX57 407 aa16.53■□□□□ 0.24
CACNB1-206ENST00000539338 CHL1O00533 1208 aa16.53■□□□□ 0.24
CACNB1-206ENST00000539338 DDX21Q9NR30 783 aaKnown RBP eCLIP16.53■□□□□ 0.24
CACNB1-206ENST00000539338 IRS4O14654 1257 aaPredicted RBP16.53■□□□□ 0.24
CACNB1-206ENST00000539338 MAATS1Q7Z4T9 603 aa16.53■□□□□ 0.24
CACNB1-206ENST00000539338 INSRP06213 1382 aa16.53■□□□□ 0.24
CACNB1-206ENST00000539338 PARP10Q53GL7 1025 aa16.52■□□□□ 0.24
CACNB1-206ENST00000539338 BRDTQ58F21 947 aaPredicted RBP16.52■□□□□ 0.24
CACNB1-206ENST00000539338 SYCP3Q8IZU3 236 aa16.52■□□□□ 0.24
CACNB1-206ENST00000539338 IP6K1Q92551 441 aa16.52■□□□□ 0.24
CACNB1-206ENST00000539338 ZBTB9Q96C00 473 aa16.52■□□□□ 0.24
CACNB1-206ENST00000539338 FAM227BQ96M60 508 aa16.52■□□□□ 0.24
CACNB1-206ENST00000539338 F8W031 263 aaPredicted RBP16.52■□□□□ 0.24
CACNB1-206ENST00000539338 SLC27A2O14975 620 aa16.52■□□□□ 0.24
CACNB1-206ENST00000539338 RPS6KB1P23443 525 aa16.52■□□□□ 0.24
CACNB1-206ENST00000539338 ASIC1P78348 528 aa16.52■□□□□ 0.24
CACNB1-206ENST00000539338 CETN1Q12798 172 aa16.52■□□□□ 0.24
CACNB1-206ENST00000539338 SLU7O95391 586 aaKnown RBP16.52■□□□□ 0.23
CACNB1-206ENST00000539338 EHBP1Q8NDI1 1231 aa16.52■□□□□ 0.23
CACNB1-206ENST00000539338 ZKSCAN3Q9BRR0 538 aa16.52■□□□□ 0.23
CACNB1-206ENST00000539338 CTAGE15A4D2H0 777 aa16.52■□□□□ 0.23
CACNB1-206ENST00000539338 CTAGE8P0CG41 777 aa16.52■□□□□ 0.23
CACNB1-206ENST00000539338 SPAG1Q07617 926 aa16.52■□□□□ 0.23
CACNB1-206ENST00000539338 CTAGE6Q86UF2 777 aa16.52■□□□□ 0.23
CACNB1-206ENST00000539338 CTAGE4Q8IX94 777 aa16.52■□□□□ 0.23
CACNB1-206ENST00000539338 USP19O94966 1318 aa16.52■□□□□ 0.23
CACNB1-206ENST00000539338 MCM6Q14566 821 aa16.51■□□□□ 0.23
CACNB1-206ENST00000539338 PICK1Q9NRD5 415 aa16.51■□□□□ 0.23
CACNB1-206ENST00000539338 SAMM50Q9Y512 469 aa16.51■□□□□ 0.23
CACNB1-206ENST00000539338 EZRP15311 586 aaKnown RBP16.51■□□□□ 0.23
CACNB1-206ENST00000539338 CYLC1P35663 651 aaPredicted RBP16.51■□□□□ 0.23
CACNB1-206ENST00000539338 NAPAP54920 295 aa16.51■□□□□ 0.23
CACNB1-206ENST00000539338 ARFGAP3Q9NP61 516 aa16.51■□□□□ 0.23
CACNB1-206ENST00000539338 RRAGDQ9NQL2 400 aaPredicted RBP16.51■□□□□ 0.23
CACNB1-206ENST00000539338 PSMA7O14818 248 aa16.51■□□□□ 0.23
CACNB1-206ENST00000539338 KARSQ15046 597 aaKnown RBP16.51■□□□□ 0.23
CACNB1-206ENST00000539338 NSFL1CQ9UNZ2 370 aaKnown RBP16.51■□□□□ 0.23
CACNB1-206ENST00000539338 MAST1Q9Y2H9 1570 aa16.51■□□□□ 0.23
CACNB1-206ENST00000539338 DBNDD2Q9BQY9 259 aa16.51■□□□□ 0.23
CACNB1-206ENST00000539338 LRRC27Q9C0I9 530 aa16.51■□□□□ 0.23
CACNB1-206ENST00000539338 LGR6Q9HBX8 967 aa16.51■□□□□ 0.23
CACNB1-206ENST00000539338 SULF1Q8IWU6 871 aa16.5■□□□□ 0.23
CACNB1-206ENST00000539338 TBCAO75347 108 aaKnown RBP16.5■□□□□ 0.23
CACNB1-206ENST00000539338 BRAPQ7Z569 592 aa16.5■□□□□ 0.23
CACNB1-206ENST00000539338 PLEKHG1Q9ULL1 1385 aa16.5■□□□□ 0.23
CACNB1-206ENST00000539338 CCDC175P0C221 793 aa16.5■□□□□ 0.23
CACNB1-206ENST00000539338 PICALMQ13492 652 aa16.5■□□□□ 0.23
CACNB1-206ENST00000539338 SPAG5Q96R06 1193 aa16.5■□□□□ 0.23
CACNB1-206ENST00000539338 IVNS1ABPQ9Y6Y0 642 aa16.5■□□□□ 0.23
CACNB1-206ENST00000539338 DPP8Q6V1X1 898 aaPredicted RBP16.5■□□□□ 0.23
CACNB1-206ENST00000539338 SYT10Q6XYQ8 523 aa16.5■□□□□ 0.23
CACNB1-206ENST00000539338 TARBP1Q13395 1621 aaKnown RBP16.5■□□□□ 0.23
CACNB1-206ENST00000539338 CHD1O14646 1710 aa16.5■□□□□ 0.23
CACNB1-206ENST00000539338 SGSM2O43147 1006 aa16.49■□□□□ 0.23
CACNB1-206ENST00000539338 TNNI3KQ59H18 835 aa16.49■□□□□ 0.23
CACNB1-206ENST00000539338 MSL1Q68DK7 614 aa16.49■□□□□ 0.23
CACNB1-206ENST00000539338 LZTFL1Q9NQ48 299 aa16.49■□□□□ 0.23
CACNB1-206ENST00000539338 PRKAG2Q9UGJ0 569 aa16.49■□□□□ 0.23
CACNB1-206ENST00000539338 FPGT-TNNI3KV9GXZ4 949 aa16.49■□□□□ 0.23
CACNB1-206ENST00000539338 ABCA8O94911 1581 aa16.49■□□□□ 0.23
CACNB1-206ENST00000539338 MCM7P33993 719 aa16.49■□□□□ 0.23
CACNB1-206ENST00000539338 FAM107BQ9H098 131 aa16.49■□□□□ 0.23
CACNB1-206ENST00000539338 NCOA5Q9HCD5 579 aaKnown RBP16.49■□□□□ 0.23
CACNB1-206ENST00000539338 NDUFB9Q9Y6M9 179 aa16.49■□□□□ 0.23
CACNB1-206ENST00000539338 KRT2P35908 639 aa16.49■□□□□ 0.23
CACNB1-206ENST00000539338 GNAQP50148 359 aa16.49■□□□□ 0.23
CACNB1-206ENST00000539338 C2CD5Q86YS7 1000 aa16.49■□□□□ 0.23
CACNB1-206ENST00000539338 FAM89AQ96GI7 184 aa16.49■□□□□ 0.23
CACNB1-206ENST00000539338 A0A1B0GUL7 405 aa16.49■□□□□ 0.23
CACNB1-206ENST00000539338 NEBLO76041 1014 aa16.49■□□□□ 0.23
CACNB1-206ENST00000539338 HELLSQ9NRZ9 838 aa16.49■□□□□ 0.23
CACNB1-206ENST00000539338 SLC5A4Q9NY91 659 aa16.49■□□□□ 0.23
CACNB1-206ENST00000539338 JAG2Q9Y219 1238 aa16.49■□□□□ 0.23
CACNB1-206ENST00000539338 EDC4Q6P2E9 1401 aaKnown RBP16.48■□□□□ 0.23
CACNB1-206ENST00000539338 SPATA31E1Q6ZUB1 1445 aa16.48■□□□□ 0.23
CACNB1-206ENST00000539338 DALRD3Q5D0E6 543 aaKnown RBP16.48■□□□□ 0.23
CACNB1-206ENST00000539338 GCOM1H8Y6P7 765 aaPredicted RBP16.48■□□□□ 0.23
CACNB1-206ENST00000539338 GADD45BO75293 160 aaPredicted RBP16.48■□□□□ 0.23
CACNB1-206ENST00000539338 MYZAPP0CAP1 466 aa16.48■□□□□ 0.23
CACNB1-206ENST00000539338 GNAT2P19087 354 aa16.48■□□□□ 0.23
CACNB1-206ENST00000539338 PLIN2Q99541 437 aa16.48■□□□□ 0.23
CACNB1-206ENST00000539338 GPBP1L1Q9HC44 474 aaPredicted RBP16.48■□□□□ 0.23
CACNB1-206ENST00000539338 MCM9Q9NXL9 1143 aa16.48■□□□□ 0.23
CACNB1-206ENST00000539338 MAST3O60307 1309 aa16.48■□□□□ 0.23
CACNB1-206ENST00000539338 ZNF790Q6PG37 636 aa16.48■□□□□ 0.23
CACNB1-206ENST00000539338 STXBP4Q6ZWJ1 553 aa16.48■□□□□ 0.23
CACNB1-206ENST00000539338 PTPRTO14522 1441 aa16.48■□□□□ 0.23
CACNB1-206ENST00000539338 FAM160A1Q05DH4 1040 aa16.48■□□□□ 0.23
CACNB1-206ENST00000539338 CKAP4Q07065 602 aaKnown RBP16.48■□□□□ 0.23
CACNB1-206ENST00000539338 TMOD4Q9NZQ9 345 aa16.48■□□□□ 0.23
CACNB1-206ENST00000539338 RTL9Q8NET4 1388 aa16.47■□□□□ 0.23
CACNB1-206ENST00000539338 MBD4O95243 580 aa16.47■□□□□ 0.23
CACNB1-206ENST00000539338 RIMBP3CA6NJZ7 1639 aa16.47■□□□□ 0.23
CACNB1-206ENST00000539338 RIMBP3BA6NNM3 1639 aa16.47■□□□□ 0.23
CACNB1-206ENST00000539338 RIMBP3Q9UFD9 1639 aa16.47■□□□□ 0.23
CACNB1-206ENST00000539338 CTAGE9A4FU28 777 aa16.47■□□□□ 0.23
CACNB1-206ENST00000539338 B4E1Z4 1266 aa16.47■□□□□ 0.23
CACNB1-206ENST00000539338 ZNF594Q96JF6 807 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms