RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 ARHGAP4P98171 946 aa10.56□□□□□ -0.72
CCDC7-209ENST00000539197 ORC1Q13415 861 aa10.56□□□□□ -0.72
CCDC7-209ENST00000539197 KRTAP1-3Q8IUG1 177 aa10.56□□□□□ -0.72
CCDC7-209ENST00000539197 C2CD4AQ8NCU7 369 aaPredicted RBP10.56□□□□□ -0.72
CCDC7-209ENST00000539197 PIM2Q9P1W9 311 aa10.56□□□□□ -0.72
CCDC7-209ENST00000539197 EGFL7Q9UHF1 273 aa10.56□□□□□ -0.72
CCDC7-209ENST00000539197 WNT11O96014 354 aa10.55□□□□□ -0.72
CCDC7-209ENST00000539197 NFKBIBQ15653 356 aa10.55□□□□□ -0.72
CCDC7-209ENST00000539197 B4GALNT3Q6L9W6 998 aa10.55□□□□□ -0.72
CCDC7-209ENST00000539197 GLYCTKQ8IVS8 523 aa10.55□□□□□ -0.72
CCDC7-209ENST00000539197 BRPF3Q9ULD4 1205 aa10.55□□□□□ -0.72
CCDC7-209ENST00000539197 FAM95CA0A1B0GW59 222 aa10.54□□□□□ -0.72
CCDC7-209ENST00000539197 MAOBP27338 520 aa10.54□□□□□ -0.72
CCDC7-209ENST00000539197 PAOXQ6QHF9 649 aa10.54□□□□□ -0.72
CCDC7-209ENST00000539197 CLEC4MQ9H2X3 399 aaPredicted RBP10.54□□□□□ -0.72
CCDC7-209ENST00000539197 LEMD3Q9Y2U8 911 aa10.54□□□□□ -0.72
CCDC7-209ENST00000539197 ADMP35318 185 aa10.53□□□□□ -0.72
CCDC7-209ENST00000539197 SOX4Q06945 474 aaPredicted RBP10.53□□□□□ -0.72
CCDC7-209ENST00000539197 USTQ9Y2C2 406 aa10.53□□□□□ -0.72
CCDC7-209ENST00000539197 NEFLP07196 543 aa10.52□□□□□ -0.73
CCDC7-209ENST00000539197 TRIM56Q9BRZ2 755 aaKnown RBP10.52□□□□□ -0.73
CCDC7-209ENST00000539197 YIPF2Q9BWQ6 316 aa10.52□□□□□ -0.73
CCDC7-209ENST00000539197 OSBPL1AQ9BXW6 950 aa10.52□□□□□ -0.73
CCDC7-209ENST00000539197 NPHS2Q9NP85 383 aa10.52□□□□□ -0.73
CCDC7-209ENST00000539197 ADH5P11766 374 aa10.51□□□□□ -0.73
CCDC7-209ENST00000539197 TAL1P17542 331 aaPredicted RBP10.51□□□□□ -0.73
CCDC7-209ENST00000539197 CPSF6Q16630 551 aaKnown RBP eCLIP10.51□□□□□ -0.73
CCDC7-209ENST00000539197 KRTAP19-1Q8IUB9 90 aa10.51□□□□□ -0.73
CCDC7-209ENST00000539197 ARID3AQ99856 593 aa10.51□□□□□ -0.73
CCDC7-209ENST00000539197 ACTL7BQ9Y614 415 aa10.51□□□□□ -0.73
CCDC7-209ENST00000539197 CYP11A1P05108 521 aa10.5□□□□□ -0.73
CCDC7-209ENST00000539197 HP1BP3Q5SSJ5 553 aaPredicted RBP10.5□□□□□ -0.73
CCDC7-209ENST00000539197 LCE3BQ5TA77 95 aa10.5□□□□□ -0.73
CCDC7-209ENST00000539197 KIAA0319Q5VV43 1072 aa10.5□□□□□ -0.73
CCDC7-209ENST00000539197 GOLGA2P5Q9HBQ8 144 aa10.5□□□□□ -0.73
CCDC7-209ENST00000539197 POU4F3Q15319 338 aa10.49□□□□□ -0.73
CCDC7-209ENST00000539197 DDX54Q8TDD1 881 aaKnown RBP10.49□□□□□ -0.73
CCDC7-209ENST00000539197 FAM129BQ96TA1 746 aa10.49□□□□□ -0.73
CCDC7-209ENST00000539197 EHD4Q9H223 541 aa10.49□□□□□ -0.73
CCDC7-209ENST00000539197 ZFYVE1Q9HBF4 777 aa10.49□□□□□ -0.73
CCDC7-209ENST00000539197 IGHA2P01877 340 aa10.48□□□□□ -0.73
CCDC7-209ENST00000539197 FOSL1P15407 271 aa10.48□□□□□ -0.73
CCDC7-209ENST00000539197 TXKP42681 527 aa10.48□□□□□ -0.73
CCDC7-209ENST00000539197 AKAP4Q5JQC9 854 aa10.48□□□□□ -0.73
CCDC7-209ENST00000539197 METTL22Q9BUU2 404 aaPredicted RBP10.48□□□□□ -0.73
CCDC7-209ENST00000539197 ZNF576Q9H609 170 aa10.48□□□□□ -0.73
CCDC7-209ENST00000539197 PRKAG2Q9UGJ0 569 aa10.48□□□□□ -0.73
CCDC7-209ENST00000539197 FAM170BA6NMN3 283 aa10.47□□□□□ -0.73
CCDC7-209ENST00000539197 GPR182O15218 404 aa10.47□□□□□ -0.73
CCDC7-209ENST00000539197 NDUFB5O43674 189 aa10.47□□□□□ -0.73
CCDC7-209ENST00000539197 B3GALT4O96024 378 aa10.47□□□□□ -0.73
CCDC7-209ENST00000539197 RAB6AP20340 208 aa10.47□□□□□ -0.73
CCDC7-209ENST00000539197 EZH1Q92800 747 aaPredicted RBP10.47□□□□□ -0.73
CCDC7-209ENST00000539197 GATA6Q92908 595 aa10.47□□□□□ -0.73
CCDC7-209ENST00000539197 TBC1D32Q96NH3 1257 aa10.47□□□□□ -0.73
CCDC7-209ENST00000539197 FAM105AQ9NUU6 356 aa10.47□□□□□ -0.73
CCDC7-209ENST00000539197 CPNE3O75131 537 aaKnown RBP10.46□□□□□ -0.73
CCDC7-209ENST00000539197 NFICP08651 508 aa10.46□□□□□ -0.73
CCDC7-209ENST00000539197 PDE3BQ13370 1112 aa10.46□□□□□ -0.73
CCDC7-209ENST00000539197 MSMPQ1L6U9 139 aa10.46□□□□□ -0.73
CCDC7-209ENST00000539197 DYMQ7RTS9 669 aa10.46□□□□□ -0.73
CCDC7-209ENST00000539197 TXNDC2Q86VQ3 553 aa10.46□□□□□ -0.73
CCDC7-209ENST00000539197 FMNL2Q96PY5 1086 aa10.46□□□□□ -0.73
CCDC7-209ENST00000539197 NIF3L1Q9GZT8 377 aa10.46□□□□□ -0.73
CCDC7-209ENST00000539197 ANGEL1Q9UNK9 670 aaKnown RBP10.46□□□□□ -0.73
CCDC7-209ENST00000539197 ZNF157P51786 506 aaPredicted RBP10.45□□□□□ -0.74
CCDC7-209ENST00000539197 NFXL1Q6ZNB6 911 aa10.45□□□□□ -0.74
CCDC7-209ENST00000539197 ZAR1Q86SH2 424 aa10.45□□□□□ -0.74
CCDC7-209ENST00000539197 CORO1BQ9BR76 489 aa10.45□□□□□ -0.74
CCDC7-209ENST00000539197 ABCB6Q9NP58 842 aa10.45□□□□□ -0.74
CCDC7-209ENST00000539197 RAD18Q9NS91 495 aa10.45□□□□□ -0.74
CCDC7-209ENST00000539197 EIF1AYO14602 144 aaKnown RBP10.44□□□□□ -0.74
CCDC7-209ENST00000539197 ITPKAP23677 461 aa10.44□□□□□ -0.74
CCDC7-209ENST00000539197 RETREG2Q8NC44 543 aa10.44□□□□□ -0.74
CCDC7-209ENST00000539197 CCDC74AQ96AQ1 378 aa10.44□□□□□ -0.74
CCDC7-209ENST00000539197 SEMA6CQ9H3T2 930 aa10.44□□□□□ -0.74
CCDC7-209ENST00000539197 LGR6Q9HBX8 967 aa10.44□□□□□ -0.74
CCDC7-209ENST00000539197 AP4E1Q9UPM8 1137 aa10.44□□□□□ -0.74
CCDC7-209ENST00000539197 DYNC1LI2O43237 492 aaPredicted RBP10.43□□□□□ -0.74
CCDC7-209ENST00000539197 MAP7Q14244 749 aa10.43□□□□□ -0.74
CCDC7-209ENST00000539197 TMC1Q8TDI8 760 aa10.43□□□□□ -0.74
CCDC7-209ENST00000539197 CYP26A1O43174 497 aa10.42□□□□□ -0.74
CCDC7-209ENST00000539197 FAAP100Q0VG06 881 aa10.42□□□□□ -0.74
CCDC7-209ENST00000539197 ABI1Q8IZP0 508 aa10.42□□□□□ -0.74
CCDC7-209ENST00000539197 EPS8L3Q8TE67 593 aaKnown RBP10.42□□□□□ -0.74
CCDC7-209ENST00000539197 WDR89Q96FK6 387 aaPredicted RBP10.42□□□□□ -0.74
CCDC7-209ENST00000539197 CITED4Q96RK1 184 aa10.42□□□□□ -0.74
CCDC7-209ENST00000539197 CCDC39Q9UFE4 941 aa10.42□□□□□ -0.74
CCDC7-209ENST00000539197 ADGRE2Q9UHX3 823 aa10.42□□□□□ -0.74
CCDC7-209ENST00000539197 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.41□□□□□ -0.74
CCDC7-209ENST00000539197 SUPT5HO00267 1087 aaKnown RBP10.41□□□□□ -0.74
CCDC7-209ENST00000539197 PRNPP04156 253 aa10.41□□□□□ -0.74
CCDC7-209ENST00000539197 GLIS3Q8NEA6 775 aa10.41□□□□□ -0.74
CCDC7-209ENST00000539197 WDR18Q9BV38 432 aa10.41□□□□□ -0.74
CCDC7-209ENST00000539197 ZC3H12CQ9C0D7 883 aaKnown RBP10.41□□□□□ -0.74
CCDC7-209ENST00000539197 ACSS3Q9H6R3 686 aa10.41□□□□□ -0.74
CCDC7-209ENST00000539197 PPP1R9AQ9ULJ8 1098 aa10.41□□□□□ -0.74
CCDC7-209ENST00000539197 RNF114Q9Y508 228 aa10.41□□□□□ -0.74
CCDC7-209ENST00000539197 AOC2O75106 756 aa10.4□□□□□ -0.74
CCDC7-209ENST00000539197 GADD45BO75293 160 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms