RNA–Protein interactions for RNA: ENST00000539041.5

SMPDL3A-203, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2 BASIC

Gene SMPDL3A, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-203ENST00000539041 PATL2C9JE40 543 aaKnown RBP24.3■■□□□ 1.48
SMPDL3A-203ENST00000539041 RPS8P62241 208 aaKnown RBP24.3■■□□□ 1.48
SMPDL3A-203ENST00000539041 UBE2HP62256 183 aa24.3■■□□□ 1.48
SMPDL3A-203ENST00000539041 FAM196AQ6ZSG2 479 aa24.3■■□□□ 1.48
SMPDL3A-203ENST00000539041 NBPF3Q9H094 633 aa24.3■■□□□ 1.48
SMPDL3A-203ENST00000539041 PHF14O94880 888 aa24.29■■□□□ 1.48
SMPDL3A-203ENST00000539041 GYG1P46976 350 aa24.29■■□□□ 1.48
SMPDL3A-203ENST00000539041 ANTXR2P58335 489 aa24.29■■□□□ 1.48
SMPDL3A-203ENST00000539041 CCT2P78371 535 aaKnown RBP24.29■■□□□ 1.48
SMPDL3A-203ENST00000539041 TRDNQ13061 729 aa24.29■■□□□ 1.48
SMPDL3A-203ENST00000539041 CAVIN4Q5BKX8 364 aa24.29■■□□□ 1.48
SMPDL3A-203ENST00000539041 FERMT3Q86UX7 667 aa24.29■■□□□ 1.48
SMPDL3A-203ENST00000539041 NAP1L2Q9ULW6 460 aaPredicted RBP24.29■■□□□ 1.48
SMPDL3A-203ENST00000539041 KIF3AQ9Y496 699 aa24.29■■□□□ 1.48
SMPDL3A-203ENST00000539041 CARMIL3Q8ND23 1372 aa24.29■■□□□ 1.48
SMPDL3A-203ENST00000539041 COL1A1P02452 1464 aaPredicted RBP24.29■■□□□ 1.48
SMPDL3A-203ENST00000539041 CTDNEP1O95476 244 aa24.29■■□□□ 1.48
SMPDL3A-203ENST00000539041 KRT85P78386 507 aa24.29■■□□□ 1.48
SMPDL3A-203ENST00000539041 TBC1D10CQ8IV04 446 aa24.29■■□□□ 1.48
SMPDL3A-203ENST00000539041 DDX11Q96FC9 970 aa24.29■■□□□ 1.48
SMPDL3A-203ENST00000539041 QTRT2Q9H974 415 aaKnown RBP24.29■■□□□ 1.48
SMPDL3A-203ENST00000539041 LRP2BPQ9P2M1 347 aa24.29■■□□□ 1.48
SMPDL3A-203ENST00000539041 PNPLA7Q6ZV29 1317 aa24.28■■□□□ 1.48
SMPDL3A-203ENST00000539041 PTPDC1A2A3K4 754 aa24.28■■□□□ 1.48
SMPDL3A-203ENST00000539041 LRSAM1Q6UWE0 723 aa24.28■■□□□ 1.48
SMPDL3A-203ENST00000539041 ARMT1Q9H993 441 aa24.28■■□□□ 1.48
SMPDL3A-203ENST00000539041 ECM29Q5VYK3 1845 aa24.28■■□□□ 1.48
SMPDL3A-203ENST00000539041 KIAA1551Q9HCM1 1747 aa24.27■■□□□ 1.48
SMPDL3A-203ENST00000539041 ADRA2BP18089 450 aa24.27■■□□□ 1.48
SMPDL3A-203ENST00000539041 GNAT2P19087 354 aa24.27■■□□□ 1.48
SMPDL3A-203ENST00000539041 IFNL3Q8IZI9 196 aa24.27■■□□□ 1.48
SMPDL3A-203ENST00000539041 ANKRD2Q9GZV1 360 aa24.27■■□□□ 1.48
SMPDL3A-203ENST00000539041 EPB41L4AQ9HCS5 686 aaPredicted RBP24.27■■□□□ 1.48
SMPDL3A-203ENST00000539041 IQSEC3Q9UPP2 1182 aaPredicted RBP24.27■■□□□ 1.48
SMPDL3A-203ENST00000539041 SALL1Q9NSC2 1324 aa24.27■■□□□ 1.48
SMPDL3A-203ENST00000539041 SYCE3A1L190 88 aa24.26■■□□□ 1.47
SMPDL3A-203ENST00000539041 H3BQV1 296 aa24.26■■□□□ 1.47
SMPDL3A-203ENST00000539041 IFFO2Q5TF58 517 aa24.26■■□□□ 1.47
SMPDL3A-203ENST00000539041 NAPBQ9H115 298 aa24.26■■□□□ 1.47
SMPDL3A-203ENST00000539041 GPHNQ9NQX3 736 aaPredicted RBP24.26■■□□□ 1.47
SMPDL3A-203ENST00000539041 LRRC4BQ9NT99 713 aa24.26■■□□□ 1.47
SMPDL3A-203ENST00000539041 DENND2AQ9ULE3 1009 aa24.26■■□□□ 1.47
SMPDL3A-203ENST00000539041 BAZ2AQ9UIF9 1905 aaKnown RBP24.26■■□□□ 1.47
SMPDL3A-203ENST00000539041 VPS37DQ86XT2 251 aa24.26■■□□□ 1.47
SMPDL3A-203ENST00000539041 CCDC24Q8N4L8 307 aa24.26■■□□□ 1.47
SMPDL3A-203ENST00000539041 NCOA5Q9HCD5 579 aaKnown RBP24.26■■□□□ 1.47
SMPDL3A-203ENST00000539041 NPHP1O15259 732 aa24.25■■□□□ 1.47
SMPDL3A-203ENST00000539041 LCORLQ8N3X6 602 aa24.25■■□□□ 1.47
SMPDL3A-203ENST00000539041 FAM84BQ96KN1 310 aaPredicted RBP24.25■■□□□ 1.47
SMPDL3A-203ENST00000539041 KLF18A0A0U1RQI7 1052 aa24.24■■□□□ 1.47
SMPDL3A-203ENST00000539041 WTIPA6NIX2 430 aaPredicted RBP24.24■■□□□ 1.47
SMPDL3A-203ENST00000539041 GSG1L2A8MUP6 293 aa24.24■■□□□ 1.47
SMPDL3A-203ENST00000539041 RESTQ13127 1097 aa24.24■■□□□ 1.47
SMPDL3A-203ENST00000539041 SEMA3EO15041 775 aa24.24■■□□□ 1.47
SMPDL3A-203ENST00000539041 CYP7A1P22680 504 aa24.24■■□□□ 1.47
SMPDL3A-203ENST00000539041 TM4SF1P30408 202 aa24.24■■□□□ 1.47
SMPDL3A-203ENST00000539041 NFIXQ14938 502 aa24.24■■□□□ 1.47
SMPDL3A-203ENST00000539041 NAA16Q6N069 864 aaPredicted RBP24.24■■□□□ 1.47
SMPDL3A-203ENST00000539041 FBXO33Q7Z6M2 555 aa24.24■■□□□ 1.47
SMPDL3A-203ENST00000539041 ZSCAN16Q9H4T2 348 aaPredicted RBP24.24■■□□□ 1.47
SMPDL3A-203ENST00000539041 SLC4A4Q9Y6R1 1079 aa24.24■■□□□ 1.47
SMPDL3A-203ENST00000539041 ELP1O95163 1332 aa24.23■■□□□ 1.47
SMPDL3A-203ENST00000539041 CYB5R4Q7L1T6 521 aa24.23■■□□□ 1.47
SMPDL3A-203ENST00000539041 NACAP1Q9BZK3 213 aa24.23■■□□□ 1.47
SMPDL3A-203ENST00000539041 RAI14Q9P0K7 980 aa24.23■■□□□ 1.47
SMPDL3A-203ENST00000539041 ABCF2Q9UG63 623 aa24.23■■□□□ 1.47
SMPDL3A-203ENST00000539041 GOLGA8BA8MQT2 603 aa24.22■■□□□ 1.47
SMPDL3A-203ENST00000539041 NASPP49321 788 aaPredicted RBP24.22■■□□□ 1.47
SMPDL3A-203ENST00000539041 CCDC183Q5T5S1 534 aa24.22■■□□□ 1.47
SMPDL3A-203ENST00000539041 FAM173BQ6P4H8 233 aa24.22■■□□□ 1.47
SMPDL3A-203ENST00000539041 TTC6Q86TZ1 520 aa24.22■■□□□ 1.47
SMPDL3A-203ENST00000539041 NEDD4P46934 1319 aa24.22■■□□□ 1.47
SMPDL3A-203ENST00000539041 PDS5AQ29RF7 1337 aaKnown RBP24.22■■□□□ 1.47
SMPDL3A-203ENST00000539041 LAMB1P07942 1786 aa24.22■■□□□ 1.47
SMPDL3A-203ENST00000539041 DHX16O60231 1041 aaKnown RBP24.21■■□□□ 1.47
SMPDL3A-203ENST00000539041 SCAND2PQ9GZW5 306 aaPredicted RBP24.21■■□□□ 1.47
SMPDL3A-203ENST00000539041 ANGEL1Q9UNK9 670 aaKnown RBP24.21■■□□□ 1.47
SMPDL3A-203ENST00000539041 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.21■■□□□ 1.47
SMPDL3A-203ENST00000539041 B4E1Z4 1266 aa24.21■■□□□ 1.47
SMPDL3A-203ENST00000539041 SH2B2O14492 632 aaPredicted RBP24.21■■□□□ 1.47
SMPDL3A-203ENST00000539041 SLC27A3Q5K4L6 730 aa24.21■■□□□ 1.47
SMPDL3A-203ENST00000539041 CNBD1Q8NA66 436 aa24.21■■□□□ 1.47
SMPDL3A-203ENST00000539041 MIGA1Q8NAN2 632 aa24.21■■□□□ 1.47
SMPDL3A-203ENST00000539041 TMEM87BQ96K49 555 aa24.21■■□□□ 1.47
SMPDL3A-203ENST00000539041 RBSNQ9H1K0 784 aa24.21■■□□□ 1.47
SMPDL3A-203ENST00000539041 HPS5Q9UPZ3 1129 aa24.21■■□□□ 1.47
SMPDL3A-203ENST00000539041 MYH2Q9UKX2 1941 aa24.2■■□□□ 1.46
SMPDL3A-203ENST00000539041 PRKAB2O43741 272 aa24.2■■□□□ 1.46
SMPDL3A-203ENST00000539041 TDO2P48775 406 aa24.2■■□□□ 1.46
SMPDL3A-203ENST00000539041 KRT27Q7Z3Y8 459 aa24.2■■□□□ 1.46
SMPDL3A-203ENST00000539041 MAGEB6P1A0A0J9YX57 407 aa24.19■■□□□ 1.46
SMPDL3A-203ENST00000539041 CTDSPL2Q05D32 466 aa24.19■■□□□ 1.46
SMPDL3A-203ENST00000539041 CNNM2Q9H8M5 875 aa24.19■■□□□ 1.46
SMPDL3A-203ENST00000539041 LETM1O95202 739 aaPredicted RBP24.19■■□□□ 1.46
SMPDL3A-203ENST00000539041 KLRK1P26718 216 aa24.19■■□□□ 1.46
SMPDL3A-203ENST00000539041 HIBADHP31937 336 aaKnown RBP24.19■■□□□ 1.46
SMPDL3A-203ENST00000539041 AKNAD1Q5T1N1 836 aa24.19■■□□□ 1.46
SMPDL3A-203ENST00000539041 ADGRA1Q86SQ6 560 aa24.18■■□□□ 1.46
SMPDL3A-203ENST00000539041 NKX2-3Q8TAU0 364 aa24.18■■□□□ 1.46
SMPDL3A-203ENST00000539041 SPATA32Q96LK8 384 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms