RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 ADGRB1O14514 1584 aa14.16□□□□□ -0.14
USP3-203ENST00000538686 ZFYVE9O95405 1425 aa14.15□□□□□ -0.14
USP3-203ENST00000538686 GOLGA8KD6RF30 607 aa14.15□□□□□ -0.14
USP3-203ENST00000538686 ZKSCAN1P17029 563 aaPredicted RBP14.15□□□□□ -0.14
USP3-203ENST00000538686 TAX1BP1Q86VP1 789 aa14.15□□□□□ -0.14
USP3-203ENST00000538686 CCDC148Q8NFR7 591 aa14.15□□□□□ -0.14
USP3-203ENST00000538686 COG1Q8WTW3 980 aa14.15□□□□□ -0.14
USP3-203ENST00000538686 NDUFAB1O14561 156 aa14.14□□□□□ -0.15
USP3-203ENST00000538686 CCDC175P0C221 793 aa14.14□□□□□ -0.15
USP3-203ENST00000538686 UBASH3AP57075 661 aa14.14□□□□□ -0.15
USP3-203ENST00000538686 CFAP70Q5T0N1 1121 aa14.14□□□□□ -0.15
USP3-203ENST00000538686 CNTROBQ8N137 903 aa14.14□□□□□ -0.15
USP3-203ENST00000538686 KIF9Q9HAQ2 790 aa14.14□□□□□ -0.15
USP3-203ENST00000538686 KIAA1468Q9P260 1216 aa14.14□□□□□ -0.15
USP3-203ENST00000538686 PUF60Q9UHX1 559 aaKnown RBP14.14□□□□□ -0.15
USP3-203ENST00000538686 ABCA8O94911 1581 aa14.14□□□□□ -0.15
USP3-203ENST00000538686 CTAGE9A4FU28 777 aa14.14□□□□□ -0.15
USP3-203ENST00000538686 NLRP12P59046 1061 aa14.14□□□□□ -0.15
USP3-203ENST00000538686 SKIDA1Q1XH10 827 aa14.14□□□□□ -0.15
USP3-203ENST00000538686 LARP1Q6PKG0 1096 aaKnown RBP14.14□□□□□ -0.15
USP3-203ENST00000538686 CEP57Q86XR8 500 aa14.14□□□□□ -0.15
USP3-203ENST00000538686 PARP9Q8IXQ6 854 aa14.14□□□□□ -0.15
USP3-203ENST00000538686 ZSWIM4Q9H7M6 989 aa14.14□□□□□ -0.15
USP3-203ENST00000538686 CHCHD3Q9NX63 227 aaKnown RBP14.14□□□□□ -0.15
USP3-203ENST00000538686 GRIN2DO15399 1336 aa14.14□□□□□ -0.15
USP3-203ENST00000538686 TARBP1Q13395 1621 aaKnown RBP14.14□□□□□ -0.15
USP3-203ENST00000538686 PREX1Q8TCU6 1659 aa14.13□□□□□ -0.15
USP3-203ENST00000538686 ABCC3O15438 1527 aa14.13□□□□□ -0.15
USP3-203ENST00000538686 GNAI2P04899 355 aa14.13□□□□□ -0.15
USP3-203ENST00000538686 CCT4P50991 539 aaKnown RBP14.13□□□□□ -0.15
USP3-203ENST00000538686 GNGT1P63211 74 aa14.13□□□□□ -0.15
USP3-203ENST00000538686 SKOR1P84550 965 aa14.13□□□□□ -0.15
USP3-203ENST00000538686 TSHZ3Q63HK5 1081 aa14.13□□□□□ -0.15
USP3-203ENST00000538686 SPDL1Q96EA4 605 aa14.13□□□□□ -0.15
USP3-203ENST00000538686 ZNF396Q96N95 335 aaPredicted RBP14.13□□□□□ -0.15
USP3-203ENST00000538686 SH3GL2Q99962 352 aa14.13□□□□□ -0.15
USP3-203ENST00000538686 TPCN1Q9ULQ1 816 aa14.13□□□□□ -0.15
USP3-203ENST00000538686 CARMIL2Q6F5E8 1435 aa14.13□□□□□ -0.15
USP3-203ENST00000538686 TARSL2A2RTX5 802 aaKnown RBP14.13□□□□□ -0.15
USP3-203ENST00000538686 PFKFB2O60825 505 aa14.13□□□□□ -0.15
USP3-203ENST00000538686 PPFIA2O75334 1257 aa14.13□□□□□ -0.15
USP3-203ENST00000538686 AP1G2O75843 785 aa14.13□□□□□ -0.15
USP3-203ENST00000538686 SERPINC1P01008 464 aa14.13□□□□□ -0.15
USP3-203ENST00000538686 RHOXF2BP0C7M4 288 aa14.13□□□□□ -0.15
USP3-203ENST00000538686 MAGEA8P43361 318 aa14.13□□□□□ -0.15
USP3-203ENST00000538686 NECAB1Q8N987 351 aa14.13□□□□□ -0.15
USP3-203ENST00000538686 OR8K1Q8NGG5 319 aa14.13□□□□□ -0.15
USP3-203ENST00000538686 RHOXF2Q9BQY4 288 aa14.13□□□□□ -0.15
USP3-203ENST00000538686 SDF4Q9BRK5 362 aa14.13□□□□□ -0.15
USP3-203ENST00000538686 IL25Q9H293 177 aa14.13□□□□□ -0.15
USP3-203ENST00000538686 MYH15Q9Y2K3 1946 aa14.12□□□□□ -0.15
USP3-203ENST00000538686 EME2A4GXA9 379 aaPredicted RBP14.12□□□□□ -0.15
USP3-203ENST00000538686 RAB27AP51159 221 aa14.12□□□□□ -0.15
USP3-203ENST00000538686 RBM5P52756 815 aaKnown RBP eCLIP14.12□□□□□ -0.15
USP3-203ENST00000538686 NCAPHQ15003 741 aa14.12□□□□□ -0.15
USP3-203ENST00000538686 TTLL7Q6ZT98 887 aa14.12□□□□□ -0.15
USP3-203ENST00000538686 ARHGEF25Q86VW2 580 aa14.12□□□□□ -0.15
USP3-203ENST00000538686 UNC5CLQ8IV45 518 aa14.12□□□□□ -0.15
USP3-203ENST00000538686 C8orf58Q8NAV2 365 aa14.12□□□□□ -0.15
USP3-203ENST00000538686 THOC1Q96FV9 657 aaKnown RBP14.12□□□□□ -0.15
USP3-203ENST00000538686 GOLPH3LQ9H4A5 285 aa14.12□□□□□ -0.15
USP3-203ENST00000538686 SLC40A1Q9NP59 571 aa14.12□□□□□ -0.15
USP3-203ENST00000538686 MAP3K5Q99683 1374 aa14.12□□□□□ -0.15
USP3-203ENST00000538686 IFT172Q9UG01 1749 aa14.12□□□□□ -0.15
USP3-203ENST00000538686 SRRM3A6NNA2 597 aaPredicted RBP14.11□□□□□ -0.15
USP3-203ENST00000538686 H3BQV1 296 aa14.11□□□□□ -0.15
USP3-203ENST00000538686 ELL2O00472 640 aaPredicted RBP14.11□□□□□ -0.15
USP3-203ENST00000538686 AHCYL1O43865 530 aa14.11□□□□□ -0.15
USP3-203ENST00000538686 CFAP100Q494V2 611 aa14.11□□□□□ -0.15
USP3-203ENST00000538686 IFFO2Q5TF58 517 aa14.11□□□□□ -0.15
USP3-203ENST00000538686 FSIP1Q8NA03 581 aa14.11□□□□□ -0.15
USP3-203ENST00000538686 SMARCC2Q8TAQ2 1214 aa14.11□□□□□ -0.15
USP3-203ENST00000538686 LMBR1Q8WVP7 490 aa14.11□□□□□ -0.15
USP3-203ENST00000538686 OSBPL9Q96SU4 736 aa14.11□□□□□ -0.15
USP3-203ENST00000538686 MYO1AQ9UBC5 1043 aa14.11□□□□□ -0.15
USP3-203ENST00000538686 ZC3H4Q9UPT8 1303 aaKnown RBP14.11□□□□□ -0.15
USP3-203ENST00000538686 LIN7AO14910 233 aaPredicted RBP14.11□□□□□ -0.15
USP3-203ENST00000538686 OPA1O60313 960 aa14.11□□□□□ -0.15
USP3-203ENST00000538686 PRKAR2BP31323 418 aa14.11□□□□□ -0.15
USP3-203ENST00000538686 ATP2B2Q01814 1243 aa14.11□□□□□ -0.15
USP3-203ENST00000538686 PSMD2Q13200 908 aa14.11□□□□□ -0.15
USP3-203ENST00000538686 DPCR1Q3MIW9 517 aa14.11□□□□□ -0.15
USP3-203ENST00000538686 HSP90AB2PQ58FF8 381 aa14.11□□□□□ -0.15
USP3-203ENST00000538686 CCDC13Q8IYE1 715 aa14.11□□□□□ -0.15
USP3-203ENST00000538686 PARD3BQ8TEW8 1205 aa14.11□□□□□ -0.15
USP3-203ENST00000538686 MRPS27Q92552 414 aaKnown RBP14.11□□□□□ -0.15
USP3-203ENST00000538686 CCDC47Q96A33 483 aaKnown RBP14.11□□□□□ -0.15
USP3-203ENST00000538686 NAA15Q9BXJ9 866 aaKnown RBP14.11□□□□□ -0.15
USP3-203ENST00000538686 ANAPC4Q9UJX5 808 aa14.11□□□□□ -0.15
USP3-203ENST00000538686 KDRP35968 1356 aa14.11□□□□□ -0.15
USP3-203ENST00000538686 A0A1W2PQ27 194 aa14.1□□□□□ -0.15
USP3-203ENST00000538686 A0A1W2PQ64 194 aa14.1□□□□□ -0.15
USP3-203ENST00000538686 A0A1W2PQD8 194 aa14.1□□□□□ -0.15
USP3-203ENST00000538686 FESP07332 822 aa14.1□□□□□ -0.15
USP3-203ENST00000538686 ATP5JP18859 108 aa14.1□□□□□ -0.15
USP3-203ENST00000538686 GGCXP38435 758 aa14.1□□□□□ -0.15
USP3-203ENST00000538686 TBX2Q13207 712 aaPredicted RBP14.1□□□□□ -0.15
USP3-203ENST00000538686 MFN1Q8IWA4 741 aa14.1□□□□□ -0.15
USP3-203ENST00000538686 RPGRIP1Q96KN7 1286 aa14.1□□□□□ -0.15
USP3-203ENST00000538686 SYCP2Q9BX26 1530 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms