RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 COL11A2P13942 1736 aaPredicted RBP10.9□□□□□ -0.66
DDB1-211ENST00000538280 ANKRD18BA2A2Z9 1011 aa10.9□□□□□ -0.66
DDB1-211ENST00000538280 IRS4O14654 1257 aaPredicted RBP10.9□□□□□ -0.66
DDB1-211ENST00000538280 ZNF500O60304 480 aaPredicted RBP10.9□□□□□ -0.66
DDB1-211ENST00000538280 TOMM70O94826 608 aa10.9□□□□□ -0.66
DDB1-211ENST00000538280 ITGA6P23229 1130 aa10.9□□□□□ -0.66
DDB1-211ENST00000538280 ARID4AP29374 1257 aaPredicted RBP10.9□□□□□ -0.66
DDB1-211ENST00000538280 MCM5P33992 734 aa10.9□□□□□ -0.66
DDB1-211ENST00000538280 ZAP70P43403 619 aa10.9□□□□□ -0.66
DDB1-211ENST00000538280 EIF5P55010 431 aaKnown RBP10.9□□□□□ -0.66
DDB1-211ENST00000538280 STK3Q13188 491 aa10.9□□□□□ -0.66
DDB1-211ENST00000538280 TAF7LQ5H9L4 462 aa10.9□□□□□ -0.66
DDB1-211ENST00000538280 C9orf131Q5VYM1 1079 aa10.9□□□□□ -0.66
DDB1-211ENST00000538280 RBM43Q6ZSC3 357 aaKnown RBP10.9□□□□□ -0.66
DDB1-211ENST00000538280 CHMP4CQ96CF2 233 aa10.9□□□□□ -0.66
DDB1-211ENST00000538280 GREM2Q9H772 168 aa10.9□□□□□ -0.66
DDB1-211ENST00000538280 CTNNA3Q9UI47 895 aa10.9□□□□□ -0.66
DDB1-211ENST00000538280 RTCBQ9Y3I0 505 aaKnown RBP10.9□□□□□ -0.66
DDB1-211ENST00000538280 ANKRD31Q8N7Z5 1873 aa10.89□□□□□ -0.67
DDB1-211ENST00000538280 MYO5AQ9Y4I1 1855 aaKnown RBP10.89□□□□□ -0.67
DDB1-211ENST00000538280 HSP90B1P14625 803 aaKnown RBP10.89□□□□□ -0.67
DDB1-211ENST00000538280 FGFR2P21802 821 aa10.89□□□□□ -0.67
DDB1-211ENST00000538280 ADD2P35612 726 aa10.89□□□□□ -0.67
DDB1-211ENST00000538280 MCAMP43121 646 aa10.89□□□□□ -0.67
DDB1-211ENST00000538280 TGFB2P61812 414 aa10.89□□□□□ -0.67
DDB1-211ENST00000538280 METTL24Q5JXM2 366 aa10.89□□□□□ -0.67
DDB1-211ENST00000538280 TRAPPC3LQ5T215 181 aa10.89□□□□□ -0.67
DDB1-211ENST00000538280 DZIP3Q86Y13 1208 aaKnown RBP10.89□□□□□ -0.67
DDB1-211ENST00000538280 MB21D2Q8IYB1 491 aaPredicted RBP10.89□□□□□ -0.67
DDB1-211ENST00000538280 SYNE4Q8N205 404 aa10.89□□□□□ -0.67
DDB1-211ENST00000538280 RNF214Q8ND24 703 aa10.89□□□□□ -0.67
DDB1-211ENST00000538280 RGS22Q8NE09 1264 aa10.89□□□□□ -0.67
DDB1-211ENST00000538280 LEO1Q8WVC0 666 aaPredicted RBP10.89□□□□□ -0.67
DDB1-211ENST00000538280 CCDC39Q9UFE4 941 aa10.89□□□□□ -0.67
DDB1-211ENST00000538280 ZKSCAN5Q9Y2L8 839 aa10.89□□□□□ -0.67
DDB1-211ENST00000538280 CACNA1SQ13698 1873 aa10.89□□□□□ -0.67
DDB1-211ENST00000538280 PTPDC1A2A3K4 754 aa10.88□□□□□ -0.67
DDB1-211ENST00000538280 RPS6KA4O75676 772 aa10.88□□□□□ -0.67
DDB1-211ENST00000538280 PDE8BO95263 885 aa10.88□□□□□ -0.67
DDB1-211ENST00000538280 GPTP24298 496 aa10.88□□□□□ -0.67
DDB1-211ENST00000538280 PDIA3P30101 505 aaKnown RBP10.88□□□□□ -0.67
DDB1-211ENST00000538280 CHRNA5P30532 468 aa10.88□□□□□ -0.67
DDB1-211ENST00000538280 ADD1P35611 737 aaKnown RBP10.88□□□□□ -0.67
DDB1-211ENST00000538280 PRELPP51888 382 aa10.88□□□□□ -0.67
DDB1-211ENST00000538280 FKBP4Q02790 459 aaKnown RBP eCLIP10.88□□□□□ -0.67
DDB1-211ENST00000538280 RASSF7Q02833 373 aa10.88□□□□□ -0.67
DDB1-211ENST00000538280 APOBRQ0VD83 1088 aa10.88□□□□□ -0.67
DDB1-211ENST00000538280 TTF1Q15361 905 aaPredicted RBP10.88□□□□□ -0.67
DDB1-211ENST00000538280 UBE3CQ15386 1083 aa10.88□□□□□ -0.67
DDB1-211ENST00000538280 GORABQ5T7V8 394 aa10.88□□□□□ -0.67
DDB1-211ENST00000538280 COL13A1Q5TAT6 717 aaPredicted RBP10.88□□□□□ -0.67
DDB1-211ENST00000538280 ZSCAN25Q6NSZ9 544 aa10.88□□□□□ -0.67
DDB1-211ENST00000538280 FAM173BQ6P4H8 233 aa10.88□□□□□ -0.67
DDB1-211ENST00000538280 INTS5Q6P9B9 1019 aaKnown RBP10.88□□□□□ -0.67
DDB1-211ENST00000538280 LDHAL6AQ6ZMR3 332 aa10.88□□□□□ -0.67
DDB1-211ENST00000538280 FERMT3Q86UX7 667 aa10.88□□□□□ -0.67
DDB1-211ENST00000538280 LRRC2Q9BYS8 371 aa10.88□□□□□ -0.67
DDB1-211ENST00000538280 DDX19AQ9NUU7 478 aaKnown RBP10.88□□□□□ -0.67
DDB1-211ENST00000538280 ZNF330Q9Y3S2 320 aaPredicted RBP10.88□□□□□ -0.67
DDB1-211ENST00000538280 SCN7AQ01118 1682 aa10.88□□□□□ -0.67
DDB1-211ENST00000538280 ZMYM6O95789 1325 aa10.87□□□□□ -0.67
DDB1-211ENST00000538280 MROH5Q6ZUA9 1318 aa10.87□□□□□ -0.67
DDB1-211ENST00000538280 ECM29Q5VYK3 1845 aa10.87□□□□□ -0.67
DDB1-211ENST00000538280 UQCRFS1P1P0C7P4 283 aa10.87□□□□□ -0.67
DDB1-211ENST00000538280 LIG1P18858 919 aa10.87□□□□□ -0.67
DDB1-211ENST00000538280 CRKLP46109 303 aaKnown RBP10.87□□□□□ -0.67
DDB1-211ENST00000538280 IMMTQ16891 758 aaKnown RBP10.87□□□□□ -0.67
DDB1-211ENST00000538280 ATL3Q6DD88 541 aa10.87□□□□□ -0.67
DDB1-211ENST00000538280 TTLL5Q6EMB2 1281 aa10.87□□□□□ -0.67
DDB1-211ENST00000538280 NLGN1Q8N2Q7 840 aa10.87□□□□□ -0.67
DDB1-211ENST00000538280 PGBD1Q96JS3 809 aa10.87□□□□□ -0.67
DDB1-211ENST00000538280 SPATA32Q96LK8 384 aa10.87□□□□□ -0.67
DDB1-211ENST00000538280 CCDC85AQ96PX6 553 aaPredicted RBP10.87□□□□□ -0.67
DDB1-211ENST00000538280 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.87□□□□□ -0.676e-8■■■■□ 20.6
DDB1-211ENST00000538280 PUS7LQ9H0K6 701 aaKnown RBP10.87□□□□□ -0.67
DDB1-211ENST00000538280 CCDC87Q9NVE4 849 aa10.87□□□□□ -0.67
DDB1-211ENST00000538280 TRMT112Q9UI30 125 aaKnown RBP10.87□□□□□ -0.67
DDB1-211ENST00000538280 KIF3AQ9Y496 699 aa10.87□□□□□ -0.67
DDB1-211ENST00000538280 TCRBV5S4A2TA0A5A2 114 aa10.86□□□□□ -0.67
DDB1-211ENST00000538280 GPAA1O43292 621 aa10.86□□□□□ -0.67
DDB1-211ENST00000538280 OFD1O75665 1012 aa10.86□□□□□ -0.67
DDB1-211ENST00000538280 CAMTA2O94983 1202 aa10.86□□□□□ -0.67
DDB1-211ENST00000538280 FGAP02671 866 aa10.86□□□□□ -0.67
DDB1-211ENST00000538280 HCLS1P14317 486 aaPredicted RBP10.86□□□□□ -0.67
DDB1-211ENST00000538280 MSNP26038 577 aaKnown RBP10.86□□□□□ -0.67
DDB1-211ENST00000538280 RFC4P35249 363 aa10.86□□□□□ -0.67
DDB1-211ENST00000538280 ANTXR2P58335 489 aa10.86□□□□□ -0.67
DDB1-211ENST00000538280 RC3H1Q5TC82 1133 aaKnown RBP10.86□□□□□ -0.67
DDB1-211ENST00000538280 GIMAP6Q6P9H5 292 aa10.86□□□□□ -0.67
DDB1-211ENST00000538280 PI16Q6UXB8 463 aa10.86□□□□□ -0.67
DDB1-211ENST00000538280 RBM46Q8TBY0 533 aaKnown RBP10.86□□□□□ -0.67
DDB1-211ENST00000538280 NUP62CLQ9H1M0 184 aa10.86□□□□□ -0.67
DDB1-211ENST00000538280 CLSTN2Q9H4D0 955 aa10.86□□□□□ -0.67
DDB1-211ENST00000538280 PIH1D3Q9NQM4 214 aaKnown RBP10.86□□□□□ -0.67
DDB1-211ENST00000538280 CNNM1Q9NRU3 951 aa10.86□□□□□ -0.67
DDB1-211ENST00000538280 RNF181Q9P0P0 153 aa10.86□□□□□ -0.67
DDB1-211ENST00000538280 RCOR1Q9UKL0 485 aa10.86□□□□□ -0.67
DDB1-211ENST00000538280 PARP3Q9Y6F1 533 aa10.86□□□□□ -0.67
DDB1-211ENST00000538280 CARMIL3Q8ND23 1372 aa10.86□□□□□ -0.67
DDB1-211ENST00000538280 POLRMTO00411 1230 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms