RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 DZIP1LQ8IYY4 767 aaKnown RBP18.59■□□□□ 0.57
LRRK1-211ENST00000538064 ABHD8Q96I13 439 aa18.59■□□□□ 0.57
LRRK1-211ENST00000538064 SIL1Q9H173 461 aa18.59■□□□□ 0.57
LRRK1-211ENST00000538064 MAST3O60307 1309 aa18.58■□□□□ 0.57
LRRK1-211ENST00000538064 IL15P40933 162 aaPredicted RBP18.58■□□□□ 0.56
LRRK1-211ENST00000538064 ATP2B3Q16720 1220 aa18.58■□□□□ 0.56
LRRK1-211ENST00000538064 SUPT20HL1Q3ZLR7 823 aa18.58■□□□□ 0.56
LRRK1-211ENST00000538064 ATF7IPQ6VMQ6 1270 aa18.58■□□□□ 0.56
LRRK1-211ENST00000538064 COPRSQ9NQ92 184 aa18.58■□□□□ 0.56
LRRK1-211ENST00000538064 ZNF70Q9UC06 446 aaPredicted RBP18.58■□□□□ 0.56
LRRK1-211ENST00000538064 SUGT1Q9Y2Z0 365 aa18.58■□□□□ 0.56
LRRK1-211ENST00000538064 PPP1R12BO60237 982 aaPredicted RBP18.57■□□□□ 0.56
LRRK1-211ENST00000538064 TRPA1O75762 1119 aa18.57■□□□□ 0.56
LRRK1-211ENST00000538064 BCAR3O75815 825 aa18.57■□□□□ 0.56
LRRK1-211ENST00000538064 RASA3Q14644 834 aa18.57■□□□□ 0.56
LRRK1-211ENST00000538064 CEP126Q9P2H0 1117 aa18.57■□□□□ 0.56
LRRK1-211ENST00000538064 UNCXA6NJT0 531 aa18.56■□□□□ 0.56
LRRK1-211ENST00000538064 MTX1Q13505 466 aa18.56■□□□□ 0.56
LRRK1-211ENST00000538064 NBPF12Q5TAG4 269 aaPredicted RBP18.56■□□□□ 0.56
LRRK1-211ENST00000538064 TEKT1Q969V4 418 aa18.56■□□□□ 0.56
LRRK1-211ENST00000538064 TDRD3Q9H7E2 651 aaKnown RBP18.56■□□□□ 0.56
LRRK1-211ENST00000538064 FZD1Q9UP38 647 aa18.56■□□□□ 0.56
LRRK1-211ENST00000538064 PA2G4Q9UQ80 394 aaKnown RBP18.56■□□□□ 0.56
LRRK1-211ENST00000538064 SREBF2Q12772 1141 aa18.55■□□□□ 0.56
LRRK1-211ENST00000538064 WDR66Q8TBY9 1149 aa18.55■□□□□ 0.56
LRRK1-211ENST00000538064 FRAT1Q92837 279 aaPredicted RBP18.55■□□□□ 0.56
LRRK1-211ENST00000538064 ZDHHC15Q96MV8 337 aa18.55■□□□□ 0.56
LRRK1-211ENST00000538064 MRIQ9BWK5 157 aa18.55■□□□□ 0.56
LRRK1-211ENST00000538064 MCOLN1Q9GZU1 580 aa18.55■□□□□ 0.56
LRRK1-211ENST00000538064 MYH2Q9UKX2 1941 aa18.55■□□□□ 0.56
LRRK1-211ENST00000538064 ZBTB22O15209 634 aa18.54■□□□□ 0.56
LRRK1-211ENST00000538064 SRGAP3O43295 1099 aa18.54■□□□□ 0.56
LRRK1-211ENST00000538064 IREB2P48200 963 aaKnown RBP18.54■□□□□ 0.56
LRRK1-211ENST00000538064 TM4SF4P48230 202 aa18.54■□□□□ 0.56
LRRK1-211ENST00000538064 TNNI2P48788 182 aa18.54■□□□□ 0.56
LRRK1-211ENST00000538064 MKRN3Q13064 507 aaKnown RBP18.54■□□□□ 0.56
LRRK1-211ENST00000538064 SPRYD7Q5W111 196 aa18.54■□□□□ 0.56
LRRK1-211ENST00000538064 TNNQ9UQP3 1299 aa18.54■□□□□ 0.56
LRRK1-211ENST00000538064 ZBTB48P10074 688 aaPredicted RBP18.53■□□□□ 0.56
LRRK1-211ENST00000538064 TEPSINQ96N21 525 aa18.53■□□□□ 0.56
LRRK1-211ENST00000538064 GNL3LQ9NVN8 582 aaKnown RBP18.53■□□□□ 0.56
LRRK1-211ENST00000538064 RPAP1Q9BWH6 1393 aaPredicted RBP18.53■□□□□ 0.56
LRRK1-211ENST00000538064 ZBED9Q6R2W3 1325 aa18.52■□□□□ 0.56
LRRK1-211ENST00000538064 TCP10L2B9ZVM9 353 aa18.52■□□□□ 0.56
LRRK1-211ENST00000538064 SEMA3EO15041 775 aa18.52■□□□□ 0.56
LRRK1-211ENST00000538064 GNAI2P04899 355 aa18.52■□□□□ 0.56
LRRK1-211ENST00000538064 ZKSCAN2Q63HK3 967 aa18.52■□□□□ 0.56
LRRK1-211ENST00000538064 HHIPL2Q6UWX4 724 aa18.52■□□□□ 0.56
LRRK1-211ENST00000538064 CDAN1Q8IWY9 1227 aa18.52■□□□□ 0.56
LRRK1-211ENST00000538064 WNK4Q96J92 1243 aa18.52■□□□□ 0.56
LRRK1-211ENST00000538064 CLMNQ96JQ2 1002 aa18.52■□□□□ 0.56
LRRK1-211ENST00000538064 SALL1Q9NSC2 1324 aa18.51■□□□□ 0.55
LRRK1-211ENST00000538064 DOCK2Q92608 1830 aa18.51■□□□□ 0.55
LRRK1-211ENST00000538064 USP2O75604 605 aaPredicted RBP18.51■□□□□ 0.55
LRRK1-211ENST00000538064 DGKZQ13574 1117 aa18.51■□□□□ 0.55
LRRK1-211ENST00000538064 FKBP1CQ5VVH2 108 aa18.51■□□□□ 0.55
LRRK1-211ENST00000538064 APOBEC3HQ6NTF7 200 aaKnown RBP18.51■□□□□ 0.55
LRRK1-211ENST00000538064 ANKRD13AQ8IZ07 590 aa18.51■□□□□ 0.55
LRRK1-211ENST00000538064 CLUAP1Q96AJ1 413 aa18.51■□□□□ 0.55
LRRK1-211ENST00000538064 SLC10A4Q96EP9 437 aa18.51■□□□□ 0.55
LRRK1-211ENST00000538064 TMEM39BQ9GZU3 492 aa18.51■□□□□ 0.55
LRRK1-211ENST00000538064 TMOD2Q9NZR1 351 aa18.51■□□□□ 0.55
LRRK1-211ENST00000538064 AK9Q5TCS8 1911 aa18.51■□□□□ 0.55
LRRK1-211ENST00000538064 MANSC4A6NHS7 340 aaPredicted RBP18.5■□□□□ 0.55
LRRK1-211ENST00000538064 ADORA1P30542 326 aa18.5■□□□□ 0.55
LRRK1-211ENST00000538064 PHKA1P46020 1223 aa18.5■□□□□ 0.55
LRRK1-211ENST00000538064 TMEM57Q8N5G2 664 aa18.5■□□□□ 0.55
LRRK1-211ENST00000538064 CFHR5Q9BXR6 569 aa18.5■□□□□ 0.55
LRRK1-211ENST00000538064 DENND2AQ9ULE3 1009 aa18.5■□□□□ 0.55
LRRK1-211ENST00000538064 PDS5AQ29RF7 1337 aaKnown RBP18.49■□□□□ 0.55
LRRK1-211ENST00000538064 CACNB3P54284 484 aa18.49■□□□□ 0.55
LRRK1-211ENST00000538064 NOM1Q5C9Z4 860 aaKnown RBP18.49■□□□□ 0.55
LRRK1-211ENST00000538064 CCDC102BQ68D86 513 aa18.49■□□□□ 0.55
LRRK1-211ENST00000538064 FAM83AQ86UY5 434 aa18.49■□□□□ 0.55
LRRK1-211ENST00000538064 PRDX5P30044 214 aa18.48■□□□□ 0.55
LRRK1-211ENST00000538064 AKAP2Q9Y2D5 859 aa18.48■□□□□ 0.55
LRRK1-211ENST00000538064 DAGLAQ9Y4D2 1042 aa18.48■□□□□ 0.55
LRRK1-211ENST00000538064 MAST2Q6P0Q8 1798 aa18.47■□□□□ 0.55
LRRK1-211ENST00000538064 PNMA6EA0A0J9YXQ4 647 aa18.47■□□□□ 0.55
LRRK1-211ENST00000538064 A0A1B0GUL7 405 aa18.47■□□□□ 0.55
LRRK1-211ENST00000538064 TBC1D8O95759 1140 aa18.47■□□□□ 0.55
LRRK1-211ENST00000538064 ALDH1A1P00352 501 aa18.47■□□□□ 0.55
LRRK1-211ENST00000538064 LDHBP07195 334 aaKnown RBP18.47■□□□□ 0.55
LRRK1-211ENST00000538064 INHBEP58166 350 aa18.47■□□□□ 0.55
LRRK1-211ENST00000538064 TFCP2Q12800 502 aa18.47■□□□□ 0.55
LRRK1-211ENST00000538064 ZGPATQ8N5A5 531 aaKnown RBP18.47■□□□□ 0.55
LRRK1-211ENST00000538064 CCDC85CA6NKD9 419 aa18.46■□□□□ 0.55
LRRK1-211ENST00000538064 GJA5P36382 358 aa18.46■□□□□ 0.55
LRRK1-211ENST00000538064 RASGRF1Q13972 1273 aa18.46■□□□□ 0.55
LRRK1-211ENST00000538064 MVPQ14764 893 aaKnown RBP18.46■□□□□ 0.55
LRRK1-211ENST00000538064 DIXDC1Q155Q3 683 aa18.46■□□□□ 0.55
LRRK1-211ENST00000538064 CTU1Q7Z7A3 348 aaKnown RBP18.46■□□□□ 0.55
LRRK1-211ENST00000538064 IFNL1Q8IU54 200 aa18.46■□□□□ 0.55
LRRK1-211ENST00000538064 FTSJ3Q8IY81 847 aaKnown RBP18.46■□□□□ 0.55
LRRK1-211ENST00000538064 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.46■□□□□ 0.55
LRRK1-211ENST00000538064 ZNF296Q8WUU4 475 aaPredicted RBP18.46■□□□□ 0.55
LRRK1-211ENST00000538064 TIMM10P62072 90 aa18.45■□□□□ 0.54
LRRK1-211ENST00000538064 VGLL4Q14135 290 aa18.45■□□□□ 0.54
LRRK1-211ENST00000538064 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.45■□□□□ 0.54
LRRK1-211ENST00000538064 HOOK2Q96ED9 719 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms