RNA–Protein interactions for RNA: ENST00000537882.2

NDRG1-229, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2 BASIC

Gene NDRG1, Length 2,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-229ENST00000537882 SIL1Q9H173 461 aa13.02□□□□□ -0.32
NDRG1-229ENST00000537882 SUGCTQ9HAC7 445 aa13.02□□□□□ -0.33
NDRG1-229ENST00000537882 CEP170BQ9Y4F5 1589 aaPredicted RBP13.02□□□□□ -0.33
NDRG1-229ENST00000537882 USP8P40818 1118 aa13.02□□□□□ -0.33
NDRG1-229ENST00000537882 FOSBP53539 338 aa13.02□□□□□ -0.33
NDRG1-229ENST00000537882 HDGFL1Q5TGJ6 251 aa13.02□□□□□ -0.33
NDRG1-229ENST00000537882 TC2NQ8N9U0 490 aa13.02□□□□□ -0.33
NDRG1-229ENST00000537882 ZSWIM4Q9H7M6 989 aa13.02□□□□□ -0.33
NDRG1-229ENST00000537882 VIPAS39Q9H9C1 493 aa13.02□□□□□ -0.33
NDRG1-229ENST00000537882 INTS13Q9NVM9 706 aa13.02□□□□□ -0.33
NDRG1-229ENST00000537882 POLR3EQ9NVU0 708 aa13.02□□□□□ -0.33
NDRG1-229ENST00000537882 OVOS2A0A0J9YW53 1432 aa13.01□□□□□ -0.33
NDRG1-229ENST00000537882 OVOS2Q6IE36 1432 aa13.01□□□□□ -0.33
NDRG1-229ENST00000537882 ERLIN2O94905 339 aa13.01□□□□□ -0.33
NDRG1-229ENST00000537882 AARSP49588 968 aaKnown RBP eCLIP13.01□□□□□ -0.33
NDRG1-229ENST00000537882 STK38Q15208 465 aa13.01□□□□□ -0.33
NDRG1-229ENST00000537882 SF3A1Q15459 793 aaKnown RBP13.01□□□□□ -0.33
NDRG1-229ENST00000537882 RIMBP3CA6NJZ7 1639 aa13.01□□□□□ -0.33
NDRG1-229ENST00000537882 RIMBP3BA6NNM3 1639 aa13.01□□□□□ -0.33
NDRG1-229ENST00000537882 RIMBP3Q9UFD9 1639 aa13.01□□□□□ -0.33
NDRG1-229ENST00000537882 AFAP1L1Q8TED9 768 aa13.01□□□□□ -0.33
NDRG1-229ENST00000537882 NCAPD2Q15021 1401 aa13□□□□□ -0.33
NDRG1-229ENST00000537882 VSNL1P62760 191 aa13□□□□□ -0.33
NDRG1-229ENST00000537882 WWC2Q6AWC2 1192 aa13□□□□□ -0.33
NDRG1-229ENST00000537882 KAT2BQ92831 832 aa13□□□□□ -0.33
NDRG1-229ENST00000537882 PUF60Q9UHX1 559 aaKnown RBP13□□□□□ -0.33
NDRG1-229ENST00000537882 U3KPZ7 1027 aaPredicted RBP13□□□□□ -0.33
NDRG1-229ENST00000537882 SPTLC2O15270 562 aa13□□□□□ -0.33
NDRG1-229ENST00000537882 PRPF6O94906 941 aaKnown RBP13□□□□□ -0.33
NDRG1-229ENST00000537882 HMGB1P09429 215 aaKnown RBP13□□□□□ -0.33
NDRG1-229ENST00000537882 CMA1P23946 247 aa13□□□□□ -0.33
NDRG1-229ENST00000537882 KARSQ15046 597 aaKnown RBP13□□□□□ -0.33
NDRG1-229ENST00000537882 TAF7Q15545 349 aaPredicted RBP13□□□□□ -0.33
NDRG1-229ENST00000537882 CTCFLQ8NI51 663 aaPredicted RBP13□□□□□ -0.33
NDRG1-229ENST00000537882 MRPL44Q9H9J2 332 aaKnown RBP13□□□□□ -0.33
NDRG1-229ENST00000537882 RIMS1Q86UR5 1692 aaKnown RBP13□□□□□ -0.33
NDRG1-229ENST00000537882 AGLP35573 1532 aa13□□□□□ -0.33
NDRG1-229ENST00000537882 RNF40O75150 1001 aa12.99□□□□□ -0.33
NDRG1-229ENST00000537882 PHACTR2O75167 634 aa12.99□□□□□ -0.33
NDRG1-229ENST00000537882 CCDC175P0C221 793 aa12.99□□□□□ -0.33
NDRG1-229ENST00000537882 EAF2Q96CJ1 260 aaPredicted RBP12.99□□□□□ -0.33
NDRG1-229ENST00000537882 AGXT2Q9BYV1 514 aa12.99□□□□□ -0.33
NDRG1-229ENST00000537882 CLIC4Q9Y696 253 aa12.99□□□□□ -0.33
NDRG1-229ENST00000537882 LRRIQ3A6PVS8 624 aaPredicted RBP12.99□□□□□ -0.33
NDRG1-229ENST00000537882 EXOC5O00471 708 aa12.99□□□□□ -0.33
NDRG1-229ENST00000537882 SHOX2O60902 331 aaPredicted RBP12.99□□□□□ -0.33
NDRG1-229ENST00000537882 HNRNPH1P31943 449 aaKnown RBP12.99□□□□□ -0.33
NDRG1-229ENST00000537882 PLEKHA4Q9H4M7 779 aa12.99□□□□□ -0.33
NDRG1-229ENST00000537882 SUFUQ9UMX1 484 aa12.99□□□□□ -0.33
NDRG1-229ENST00000537882 COL15A1P39059 1388 aa12.99□□□□□ -0.33
NDRG1-229ENST00000537882 PFKFB1P16118 471 aa12.99□□□□□ -0.33
NDRG1-229ENST00000537882 SPECC1LQ69YQ0 1117 aa12.99□□□□□ -0.33
NDRG1-229ENST00000537882 WDR93Q6P2C0 686 aa12.99□□□□□ -0.33
NDRG1-229ENST00000537882 BOLA2Q9H3K6 86 aa12.99□□□□□ -0.33
NDRG1-229ENST00000537882 C19orf44Q9H6X5 657 aa12.99□□□□□ -0.33
NDRG1-229ENST00000537882 PA2G4Q9UQ80 394 aaKnown RBP12.99□□□□□ -0.33
NDRG1-229ENST00000537882 USP31Q70CQ4 1352 aa12.98□□□□□ -0.33
NDRG1-229ENST00000537882 CARMIL3Q8ND23 1372 aa12.98□□□□□ -0.33
NDRG1-229ENST00000537882 PATL2C9JE40 543 aaKnown RBP12.98□□□□□ -0.33
NDRG1-229ENST00000537882 SYF2O95926 243 aaKnown RBP12.98□□□□□ -0.33
NDRG1-229ENST00000537882 CYP21A2P08686 494 aa12.98□□□□□ -0.33
NDRG1-229ENST00000537882 MNAT1P51948 309 aa12.98□□□□□ -0.33
NDRG1-229ENST00000537882 GUCY1B3Q02153 619 aa12.98□□□□□ -0.33
NDRG1-229ENST00000537882 DHX32Q7L7V1 743 aaKnown RBP12.98□□□□□ -0.33
NDRG1-229ENST00000537882 ARHGEF25Q86VW2 580 aa12.98□□□□□ -0.33
NDRG1-229ENST00000537882 ZNF526Q8TF50 670 aaPredicted RBP12.98□□□□□ -0.33
NDRG1-229ENST00000537882 TACO1Q9BSH4 297 aaKnown RBP12.98□□□□□ -0.33
NDRG1-229ENST00000537882 FANCLQ9NW38 375 aa12.98□□□□□ -0.33
NDRG1-229ENST00000537882 NALCNQ8IZF0 1738 aa12.98□□□□□ -0.33
NDRG1-229ENST00000537882 GNAT3A8MTJ3 354 aa12.98□□□□□ -0.33
NDRG1-229ENST00000537882 KIF5CO60282 957 aa12.98□□□□□ -0.33
NDRG1-229ENST00000537882 KCNV1Q6PIU1 500 aa12.98□□□□□ -0.33
NDRG1-229ENST00000537882 PDILTQ8N807 584 aa12.98□□□□□ -0.33
NDRG1-229ENST00000537882 SEC62Q99442 399 aaKnown RBP12.98□□□□□ -0.33
NDRG1-229ENST00000537882 DESI2Q9BSY9 194 aa12.98□□□□□ -0.33
NDRG1-229ENST00000537882 LRRC2Q9BYS8 371 aa12.98□□□□□ -0.33
NDRG1-229ENST00000537882 IRX2Q9BZI1 471 aaPredicted RBP12.98□□□□□ -0.33
NDRG1-229ENST00000537882 A1CFQ9NQ94 594 aaKnown RBP12.98□□□□□ -0.33
NDRG1-229ENST00000537882 NCKAP5LQ9HCH0 1330 aa12.97□□□□□ -0.33
NDRG1-229ENST00000537882 SASH1O94885 1247 aa12.97□□□□□ -0.33
NDRG1-229ENST00000537882 PIP4K2BP78356 416 aa12.97□□□□□ -0.33
NDRG1-229ENST00000537882 PI4KAP2A4QPH2 592 aa12.97□□□□□ -0.33
NDRG1-229ENST00000537882 ADKP55263 362 aaKnown RBP12.97□□□□□ -0.33
NDRG1-229ENST00000537882 WHAMMP3Q1A5X7 153 aa12.97□□□□□ -0.33
NDRG1-229ENST00000537882 PLEKHO1Q53GL0 409 aaPredicted RBP12.97□□□□□ -0.33
NDRG1-229ENST00000537882 ISM2Q6H9L7 571 aa12.97□□□□□ -0.33
NDRG1-229ENST00000537882 OLFM4Q6UX06 510 aa12.97□□□□□ -0.33
NDRG1-229ENST00000537882 POTEDQ86YR6 584 aa12.97□□□□□ -0.33
NDRG1-229ENST00000537882 PI4KAP1Q8N8J0 262 aa12.97□□□□□ -0.33
NDRG1-229ENST00000537882 RFX7Q2KHR2 1363 aa12.97□□□□□ -0.33
NDRG1-229ENST00000537882 IGSF1Q8N6C5 1336 aa12.97□□□□□ -0.33
NDRG1-229ENST00000537882 CTAGE15A4D2H0 777 aa12.96□□□□□ -0.33
NDRG1-229ENST00000537882 RHOXF2BP0C7M4 288 aa12.96□□□□□ -0.33
NDRG1-229ENST00000537882 CTAGE8P0CG41 777 aa12.96□□□□□ -0.33
NDRG1-229ENST00000537882 PTPN21Q16825 1174 aa12.96□□□□□ -0.33
NDRG1-229ENST00000537882 BRAPQ7Z569 592 aa12.96□□□□□ -0.33
NDRG1-229ENST00000537882 CTAGE6Q86UF2 777 aa12.96□□□□□ -0.33
NDRG1-229ENST00000537882 CTAGE4Q8IX94 777 aa12.96□□□□□ -0.33
NDRG1-229ENST00000537882 RHOXF2Q9BQY4 288 aa12.96□□□□□ -0.33
NDRG1-229ENST00000537882 CCDC8Q9H0W5 538 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms