RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 INHBEP58166 350 aa12.13□□□□□ -0.47
CHD4-207ENST00000537634 PUM3Q15397 648 aaKnown RBP12.13□□□□□ -0.47
CHD4-207ENST00000537634 PKN2Q16513 984 aaKnown RBP12.13□□□□□ -0.47
CHD4-207ENST00000537634 DZIP1LQ8IYY4 767 aaKnown RBP12.13□□□□□ -0.47
CHD4-207ENST00000537634 VGLL2Q8N8G2 317 aa12.13□□□□□ -0.47
CHD4-207ENST00000537634 CDCA7LQ96GN5 454 aa12.13□□□□□ -0.47
CHD4-207ENST00000537634 WNK4Q96J92 1243 aa12.13□□□□□ -0.47
CHD4-207ENST00000537634 CFHR5Q9BXR6 569 aa12.13□□□□□ -0.47
CHD4-207ENST00000537634 TCP10L2B9ZVM9 353 aa12.12□□□□□ -0.47
CHD4-207ENST00000537634 TNNI2P48788 182 aa12.12□□□□□ -0.47
CHD4-207ENST00000537634 SOX10P56693 466 aa12.12□□□□□ -0.47
CHD4-207ENST00000537634 ANKRD13AQ8IZ07 590 aa12.12□□□□□ -0.47
CHD4-207ENST00000537634 TEKT1Q969V4 418 aa12.12□□□□□ -0.47
CHD4-207ENST00000537634 MAST3O60307 1309 aa12.11□□□□□ -0.47
CHD4-207ENST00000537634 KIF16BQ96L93 1317 aa12.11□□□□□ -0.47
CHD4-207ENST00000537634 EYA2O00167 538 aa12.11□□□□□ -0.47
CHD4-207ENST00000537634 FKTNO75072 461 aa12.11□□□□□ -0.47
CHD4-207ENST00000537634 USP2O75604 605 aaPredicted RBP12.11□□□□□ -0.47
CHD4-207ENST00000537634 CT47B1P0C2W7 299 aaPredicted RBP12.11□□□□□ -0.47
CHD4-207ENST00000537634 UBTFL1P0CB47 393 aaPredicted RBP12.11□□□□□ -0.47
CHD4-207ENST00000537634 SLC5A1P13866 664 aa12.11□□□□□ -0.47
CHD4-207ENST00000537634 BCAMP50895 628 aa12.11□□□□□ -0.47
CHD4-207ENST00000537634 HDLBPQ00341 1268 aaKnown RBP12.11□□□□□ -0.47
CHD4-207ENST00000537634 IFNL1Q8IU54 200 aa12.11□□□□□ -0.47
CHD4-207ENST00000537634 TMOD2Q9NZR1 351 aa12.11□□□□□ -0.47
CHD4-207ENST00000537634 HPS5Q9UPZ3 1129 aa12.11□□□□□ -0.47
CHD4-207ENST00000537634 FGFR2P21802 821 aa12.1□□□□□ -0.47
CHD4-207ENST00000537634 RFX5P48382 616 aaPredicted RBP12.1□□□□□ -0.47
CHD4-207ENST00000537634 GRIK5Q16478 980 aa12.1□□□□□ -0.47
CHD4-207ENST00000537634 OTUD7BQ6GQQ9 843 aa12.1□□□□□ -0.47
CHD4-207ENST00000537634 TMEM39BQ9GZU3 492 aa12.1□□□□□ -0.47
CHD4-207ENST00000537634 R3HDMLQ9H3Y0 253 aa12.1□□□□□ -0.47
CHD4-207ENST00000537634 ELP3Q9H9T3 547 aa12.1□□□□□ -0.47
CHD4-207ENST00000537634 SUGT1Q9Y2Z0 365 aa12.1□□□□□ -0.47
CHD4-207ENST00000537634 IGF2BP3O00425 579 aaKnown RBP eCLIP12.09□□□□□ -0.47
CHD4-207ENST00000537634 FBXO46Q6PJ61 603 aaPredicted RBP12.09□□□□□ -0.47
CHD4-207ENST00000537634 CDAN1Q8IWY9 1227 aa12.09□□□□□ -0.47
CHD4-207ENST00000537634 TRMT2AQ8IZ69 625 aaKnown RBP12.09□□□□□ -0.47
CHD4-207ENST00000537634 LPIN2Q92539 896 aa12.09□□□□□ -0.47
CHD4-207ENST00000537634 OPTNQ96CV9 577 aa12.09□□□□□ -0.47
CHD4-207ENST00000537634 ZDHHC15Q96MV8 337 aa12.09□□□□□ -0.47
CHD4-207ENST00000537634 TEPSINQ96N21 525 aa12.09□□□□□ -0.47
CHD4-207ENST00000537634 API5Q9BZZ5 524 aaKnown RBP12.09□□□□□ -0.47
CHD4-207ENST00000537634 NOB1Q9ULX3 412 aaKnown RBP12.09□□□□□ -0.47
CHD4-207ENST00000537634 HDAC5Q9UQL6 1122 aa12.09□□□□□ -0.47
CHD4-207ENST00000537634 GJA5P36382 358 aa12.08□□□□□ -0.48
CHD4-207ENST00000537634 CACNB3P54284 484 aa12.08□□□□□ -0.48
CHD4-207ENST00000537634 WDR66Q8TBY9 1149 aa12.08□□□□□ -0.48
CHD4-207ENST00000537634 SIL1Q9H173 461 aa12.08□□□□□ -0.48
CHD4-207ENST00000537634 FBXO3Q9UK99 471 aa12.08□□□□□ -0.48
CHD4-207ENST00000537634 CSADQ9Y600 493 aa12.08□□□□□ -0.48
CHD4-207ENST00000537634 CCER2I3L3R5 266 aa12.07□□□□□ -0.48
CHD4-207ENST00000537634 CIAO1O76071 339 aa12.07□□□□□ -0.48
CHD4-207ENST00000537634 MAP3K9P80192 1104 aa12.07□□□□□ -0.48
CHD4-207ENST00000537634 VGLL4Q14135 290 aa12.07□□□□□ -0.48
CHD4-207ENST00000537634 ATP2B3Q16720 1220 aa12.07□□□□□ -0.48
CHD4-207ENST00000537634 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.07□□□□□ -0.48
CHD4-207ENST00000537634 ATG9AQ7Z3C6 839 aa12.07□□□□□ -0.48
CHD4-207ENST00000537634 HOOK2Q96ED9 719 aa12.07□□□□□ -0.48
CHD4-207ENST00000537634 MRIQ9BWK5 157 aa12.07□□□□□ -0.48
CHD4-207ENST00000537634 GNL3LQ9NVN8 582 aaKnown RBP12.07□□□□□ -0.48
CHD4-207ENST00000537634 CEP126Q9P2H0 1117 aa12.07□□□□□ -0.48
CHD4-207ENST00000537634 LRRFIP2Q9Y608 721 aaKnown RBP12.07□□□□□ -0.48
CHD4-207ENST00000537634 CRHR2Q13324 411 aa12.06□□□□□ -0.48
CHD4-207ENST00000537634 FKBP1CQ5VVH2 108 aa12.06□□□□□ -0.48
CHD4-207ENST00000537634 APOBEC3HQ6NTF7 200 aaKnown RBP12.06□□□□□ -0.48
CHD4-207ENST00000537634 HHIPL2Q6UWX4 724 aa12.06□□□□□ -0.48
CHD4-207ENST00000537634 FAM83AQ86UY5 434 aa12.06□□□□□ -0.48
CHD4-207ENST00000537634 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.06□□□□□ -0.48
CHD4-207ENST00000537634 ERO1AQ96HE7 468 aa12.06□□□□□ -0.48
CHD4-207ENST00000537634 TRIM17Q9Y577 477 aa12.06□□□□□ -0.48
CHD4-207ENST00000537634 RPAP1Q9BWH6 1393 aaPredicted RBP12.05□□□□□ -0.48
CHD4-207ENST00000537634 CCL15-CCL14A0A0B4J2E2 113 aa12.05□□□□□ -0.48
CHD4-207ENST00000537634 TESPA1A2RU30 521 aaPredicted RBP12.05□□□□□ -0.48
CHD4-207ENST00000537634 IL15P40933 162 aaPredicted RBP12.05□□□□□ -0.48
CHD4-207ENST00000537634 GTF2A2P52657 109 aa12.05□□□□□ -0.48
CHD4-207ENST00000537634 CCL15Q16663 113 aa12.05□□□□□ -0.48
CHD4-207ENST00000537634 DCAF15Q66K64 600 aa12.05□□□□□ -0.48
CHD4-207ENST00000537634 OTOP1Q7RTM1 612 aa12.05□□□□□ -0.48
CHD4-207ENST00000537634 CNKSR2Q8WXI2 1034 aa12.05□□□□□ -0.48
CHD4-207ENST00000537634 OTUD5Q96G74 571 aa12.05□□□□□ -0.48
CHD4-207ENST00000537634 WRNIP1Q96S55 665 aa12.05□□□□□ -0.48
CHD4-207ENST00000537634 MEIS3Q99687 375 aa12.05□□□□□ -0.48
CHD4-207ENST00000537634 PTPN18Q99952 460 aa12.05□□□□□ -0.48
CHD4-207ENST00000537634 SPDYE5A6NIY4 337 aa12.04□□□□□ -0.48
CHD4-207ENST00000537634 LDHBP07195 334 aaKnown RBP12.04□□□□□ -0.48
CHD4-207ENST00000537634 RARSP54136 660 aaKnown RBP12.04□□□□□ -0.48
CHD4-207ENST00000537634 CD99L2Q8TCZ2 262 aa12.04□□□□□ -0.48
CHD4-207ENST00000537634 MS4A4AQ96JQ5 239 aa12.04□□□□□ -0.48
CHD4-207ENST00000537634 DENND2AQ9ULE3 1009 aa12.04□□□□□ -0.48
CHD4-207ENST00000537634 PA2G4Q9UQ80 394 aaKnown RBP12.04□□□□□ -0.48
CHD4-207ENST00000537634 PDE4DIPQ5VU43 2346 aa12.04□□□□□ -0.48
CHD4-207ENST00000537634 AK9Q5TCS8 1911 aa12.03□□□□□ -0.48
CHD4-207ENST00000537634 SEMA3EO15041 775 aa12.03□□□□□ -0.48
CHD4-207ENST00000537634 GNAI3P08754 354 aa12.03□□□□□ -0.48
CHD4-207ENST00000537634 PRDX5P30044 214 aa12.03□□□□□ -0.48
CHD4-207ENST00000537634 PHKA1P46020 1223 aa12.03□□□□□ -0.48
CHD4-207ENST00000537634 SP3Q02447 781 aa12.03□□□□□ -0.48
CHD4-207ENST00000537634 TAF1CQ15572 869 aaPredicted RBP12.03□□□□□ -0.48
CHD4-207ENST00000537634 DIXDC1Q155Q3 683 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms