RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 CYP7A1P22680 504 aa18.87■□□□□ 0.61
SFSWAP-206ENST00000537582 DIXDC1Q155Q3 683 aa18.87■□□□□ 0.61
SFSWAP-206ENST00000537582 STRIP1Q5VSL9 837 aa18.87■□□□□ 0.61
SFSWAP-206ENST00000537582 USP17L1Q7RTZ2 530 aa18.87■□□□□ 0.61
SFSWAP-206ENST00000537582 APPBP2Q92624 585 aa18.87■□□□□ 0.61
SFSWAP-206ENST00000537582 ZNRF3Q9ULT6 936 aa18.87■□□□□ 0.61
SFSWAP-206ENST00000537582 UBE3CQ15386 1083 aa18.86■□□□□ 0.61
SFSWAP-206ENST00000537582 ZSCAN25Q6NSZ9 544 aa18.86■□□□□ 0.61
SFSWAP-206ENST00000537582 DZIP1Q86YF9 867 aaKnown RBP18.86■□□□□ 0.61
SFSWAP-206ENST00000537582 MIGA1Q8NAN2 632 aa18.86■□□□□ 0.61
SFSWAP-206ENST00000537582 TBC1D22AQ8WUA7 517 aa18.86■□□□□ 0.61
SFSWAP-206ENST00000537582 MAST2Q6P0Q8 1798 aa18.86■□□□□ 0.61
SFSWAP-206ENST00000537582 PSMD14O00487 310 aa18.85■□□□□ 0.61
SFSWAP-206ENST00000537582 PTH1RQ03431 593 aa18.85■□□□□ 0.61
SFSWAP-206ENST00000537582 GPR162Q16538 588 aa18.85■□□□□ 0.61
SFSWAP-206ENST00000537582 MCMDC2Q4G0Z9 681 aa18.85■□□□□ 0.61
SFSWAP-206ENST00000537582 NAA16Q6N069 864 aaPredicted RBP18.85■□□□□ 0.61
SFSWAP-206ENST00000537582 ZGPATQ8N5A5 531 aaKnown RBP18.85■□□□□ 0.61
SFSWAP-206ENST00000537582 RUFY2Q8WXA3 655 aa18.85■□□□□ 0.61
SFSWAP-206ENST00000537582 ANO2Q9NQ90 1003 aa18.85■□□□□ 0.61
SFSWAP-206ENST00000537582 HELLSQ9NRZ9 838 aa18.85■□□□□ 0.61
SFSWAP-206ENST00000537582 CXCL9Q07325 125 aa18.85■□□□□ 0.61
SFSWAP-206ENST00000537582 VPS53Q5VIR6 699 aa18.85■□□□□ 0.61
SFSWAP-206ENST00000537582 SPTY2D1Q68D10 685 aaPredicted RBP18.85■□□□□ 0.61
SFSWAP-206ENST00000537582 JDP2Q8WYK2 163 aa18.85■□□□□ 0.61
SFSWAP-206ENST00000537582 ADAMTSL1Q8N6G6 1762 aa18.84■□□□□ 0.61
SFSWAP-206ENST00000537582 SCNN1DP51172 638 aa18.84■□□□□ 0.61
SFSWAP-206ENST00000537582 DYNLL1P63167 89 aaKnown RBP18.84■□□□□ 0.61
SFSWAP-206ENST00000537582 LRRFIP1Q32MZ4 808 aaKnown RBP18.84■□□□□ 0.61
SFSWAP-206ENST00000537582 KIAA0825Q8IV33 1275 aa18.84■□□□□ 0.61
SFSWAP-206ENST00000537582 LSG1Q9H089 658 aaKnown RBP18.84■□□□□ 0.61
SFSWAP-206ENST00000537582 ZBTB12Q9Y330 459 aaPredicted RBP18.84■□□□□ 0.61
SFSWAP-206ENST00000537582 CCDC171Q6TFL3 1326 aa18.84■□□□□ 0.61
SFSWAP-206ENST00000537582 RAD50Q92878 1312 aa18.84■□□□□ 0.61
SFSWAP-206ENST00000537582 GPAA1O43292 621 aa18.83■□□□□ 0.6
SFSWAP-206ENST00000537582 MBD4O95243 580 aa18.83■□□□□ 0.6
SFSWAP-206ENST00000537582 TICAM2Q86XR7 235 aa18.83■□□□□ 0.6
SFSWAP-206ENST00000537582 LCORLQ8N3X6 602 aa18.83■□□□□ 0.6
SFSWAP-206ENST00000537582 ARMT1Q9H993 441 aa18.83■□□□□ 0.6
SFSWAP-206ENST00000537582 TTF2Q9UNY4 1162 aaKnown RBP18.83■□□□□ 0.6
SFSWAP-206ENST00000537582 ZNF541Q9H0D2 1346 aa18.83■□□□□ 0.6
SFSWAP-206ENST00000537582 CCDC88AQ3V6T2 1871 aa18.83■□□□□ 0.6
SFSWAP-206ENST00000537582 PSME4Q14997 1843 aa18.82■□□□□ 0.6
SFSWAP-206ENST00000537582 FOXP2O15409 715 aa18.82■□□□□ 0.6
SFSWAP-206ENST00000537582 LMNB1P20700 586 aa18.82■□□□□ 0.6
SFSWAP-206ENST00000537582 PCDHAC2Q9Y5I4 1007 aa18.82■□□□□ 0.6
SFSWAP-206ENST00000537582 VIL1P09327 827 aaKnown RBP18.81■□□□□ 0.6
SFSWAP-206ENST00000537582 RSBN1LQ6PCB5 846 aaPredicted RBP18.81■□□□□ 0.6
SFSWAP-206ENST00000537582 USP26Q9BXU7 913 aa18.81■□□□□ 0.6
SFSWAP-206ENST00000537582 FZD9O00144 591 aa18.81■□□□□ 0.6
SFSWAP-206ENST00000537582 PRKAB2O43741 272 aa18.81■□□□□ 0.6
SFSWAP-206ENST00000537582 REC8O95072 547 aa18.81■□□□□ 0.6
SFSWAP-206ENST00000537582 FKBP1AP62942 108 aaKnown RBP18.81■□□□□ 0.6
SFSWAP-206ENST00000537582 STRBPQ96SI9 672 aaKnown RBP18.81■□□□□ 0.6
SFSWAP-206ENST00000537582 RIOK1Q9BRS2 568 aaKnown RBP18.81■□□□□ 0.6
SFSWAP-206ENST00000537582 AATFQ9NY61 560 aaKnown RBP eCLIP18.81■□□□□ 0.6
SFSWAP-206ENST00000537582 RNF181Q9P0P0 153 aa18.81■□□□□ 0.6
SFSWAP-206ENST00000537582 SBF1O95248 1867 aa18.8■□□□□ 0.6
SFSWAP-206ENST00000537582 MAGEB6P1A0A0J9YX57 407 aa18.8■□□□□ 0.6
SFSWAP-206ENST00000537582 CIAPIN1Q6FI81 312 aa18.8■□□□□ 0.6
SFSWAP-206ENST00000537582 AIDAQ96BJ3 306 aa18.8■□□□□ 0.6
SFSWAP-206ENST00000537582 GMLQ99445 158 aa18.8■□□□□ 0.6
SFSWAP-206ENST00000537582 SUGT1Q9Y2Z0 365 aa18.8■□□□□ 0.6
SFSWAP-206ENST00000537582 MROH7-TTC4A0A0A0MT08 1334 aa18.8■□□□□ 0.6
SFSWAP-206ENST00000537582 SHTN1A0MZ66 631 aa18.79■□□□□ 0.6
SFSWAP-206ENST00000537582 C9orf131Q5VYM1 1079 aa18.79■□□□□ 0.6
SFSWAP-206ENST00000537582 KIAA1211Q6ZU35 1233 aa18.79■□□□□ 0.6
SFSWAP-206ENST00000537582 DAGLAQ9Y4D2 1042 aa18.79■□□□□ 0.6
SFSWAP-206ENST00000537582 GAKO14976 1311 aa18.78■□□□□ 0.6
SFSWAP-206ENST00000537582 HSPD1P10809 573 aaKnown RBP18.78■□□□□ 0.6
SFSWAP-206ENST00000537582 GSTO1P78417 241 aa18.78■□□□□ 0.6
SFSWAP-206ENST00000537582 GJA3Q9Y6H8 435 aa18.78■□□□□ 0.6
SFSWAP-206ENST00000537582 BTDP43251 543 aa18.77■□□□□ 0.6
SFSWAP-206ENST00000537582 C22orf23Q9BZE7 217 aa18.77■□□□□ 0.6
SFSWAP-206ENST00000537582 MYH2Q9UKX2 1941 aa18.77■□□□□ 0.6
SFSWAP-206ENST00000537582 CRKP46108 304 aa18.76■□□□□ 0.59
SFSWAP-206ENST00000537582 EIF6P56537 245 aaKnown RBP18.76■□□□□ 0.59
SFSWAP-206ENST00000537582 SH3RF3Q8TEJ3 882 aaPredicted RBP18.76■□□□□ 0.59
SFSWAP-206ENST00000537582 SDR42E1Q8WUS8 393 aa18.76■□□□□ 0.59
SFSWAP-206ENST00000537582 MAP4K1Q92918 833 aa18.76■□□□□ 0.59
SFSWAP-206ENST00000537582 TBC1D32Q96NH3 1257 aa18.76■□□□□ 0.59
SFSWAP-206ENST00000537582 EPB41L4AQ9HCS5 686 aaPredicted RBP18.76■□□□□ 0.59
SFSWAP-206ENST00000537582 PALD1Q9ULE6 856 aa18.76■□□□□ 0.59
SFSWAP-206ENST00000537582 RBM8AQ9Y5S9 174 aaKnown RBP18.76■□□□□ 0.59
SFSWAP-206ENST00000537582 TIAM2Q8IVF5 1701 aa18.76■□□□□ 0.59
SFSWAP-206ENST00000537582 GPR75-ASB3A0A0A6YYF3 556 aa18.76■□□□□ 0.59
SFSWAP-206ENST00000537582 TNIP1Q15025 636 aa18.76■□□□□ 0.59
SFSWAP-206ENST00000537582 FAM163AQ96GL9 167 aaPredicted RBP18.76■□□□□ 0.59
SFSWAP-206ENST00000537582 UPF2Q9HAU5 1272 aaKnown RBP18.76■□□□□ 0.59
SFSWAP-206ENST00000537582 TAF6LQ9Y6J9 622 aa18.76■□□□□ 0.59
SFSWAP-206ENST00000537582 SLC4A4Q9Y6R1 1079 aa18.76■□□□□ 0.59
SFSWAP-206ENST00000537582 DICER1Q9UPY3 1922 aaKnown RBP18.76■□□□□ 0.59
SFSWAP-206ENST00000537582 MYO3BQ8WXR4 1341 aa18.75■□□□□ 0.59
SFSWAP-206ENST00000537582 GSG1L2A8MUP6 293 aa18.75■□□□□ 0.59
SFSWAP-206ENST00000537582 LDHCP07864 332 aa18.75■□□□□ 0.59
SFSWAP-206ENST00000537582 GMPSP49915 693 aaPredicted RBP18.75■□□□□ 0.59
SFSWAP-206ENST00000537582 TEKT1Q969V4 418 aa18.75■□□□□ 0.59
SFSWAP-206ENST00000537582 GRIN3BO60391 1043 aa18.74■□□□□ 0.59
SFSWAP-206ENST00000537582 RHBDL3P58872 404 aa18.74■□□□□ 0.59
SFSWAP-206ENST00000537582 APOBEC3HQ6NTF7 200 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 264.9 ms