RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 GTF2E1P29083 439 aaPredicted RBP18.36■□□□□ 0.53
MKS1-204ENST00000537529 SLC10A5Q5PT55 438 aa18.36■□□□□ 0.53
MKS1-204ENST00000537529 GIMAP6Q6P9H5 292 aa18.36■□□□□ 0.53
MKS1-204ENST00000537529 ZNF396Q96N95 335 aaPredicted RBP18.36■□□□□ 0.53
MKS1-204ENST00000537529 NAPBQ9H115 298 aa18.36■□□□□ 0.53
MKS1-204ENST00000537529 DDX19AQ9NUU7 478 aaKnown RBP18.36■□□□□ 0.53
MKS1-204ENST00000537529 BSDC1Q9NW68 430 aaPredicted RBP18.36■□□□□ 0.53
MKS1-204ENST00000537529 NARFQ9UHQ1 456 aa18.36■□□□□ 0.53
MKS1-204ENST00000537529 USP21Q9UK80 565 aa18.36■□□□□ 0.53
MKS1-204ENST00000537529 ANGEL1Q9UNK9 670 aaKnown RBP18.36■□□□□ 0.53
MKS1-204ENST00000537529 HPS5Q9UPZ3 1129 aa18.36■□□□□ 0.53
MKS1-204ENST00000537529 SPATA31A6Q5VVP1 1343 aa18.36■□□□□ 0.53
MKS1-204ENST00000537529 CPLX1O14810 134 aa18.35■□□□□ 0.53
MKS1-204ENST00000537529 LIG1P18858 919 aa18.35■□□□□ 0.53
MKS1-204ENST00000537529 KCNQ4P56696 695 aa18.35■□□□□ 0.53
MKS1-204ENST00000537529 UBE4AQ14139 1066 aa18.35■□□□□ 0.53
MKS1-204ENST00000537529 TBC1D9BQ66K14 1250 aa18.35■□□□□ 0.53
MKS1-204ENST00000537529 FUCA2Q9BTY2 467 aa18.35■□□□□ 0.53
MKS1-204ENST00000537529 PNPLA7Q6ZV29 1317 aa18.35■□□□□ 0.53
MKS1-204ENST00000537529 BICDL1Q6ZP65 573 aa18.35■□□□□ 0.53
MKS1-204ENST00000537529 C3orf67Q6ZVT6 689 aa18.35■□□□□ 0.53
MKS1-204ENST00000537529 IFNL3Q8IZI9 196 aa18.35■□□□□ 0.53
MKS1-204ENST00000537529 BICD2Q8TD16 824 aa18.35■□□□□ 0.53
MKS1-204ENST00000537529 TMEM87BQ96K49 555 aa18.35■□□□□ 0.53
MKS1-204ENST00000537529 ARMT1Q9H993 441 aa18.35■□□□□ 0.53
MKS1-204ENST00000537529 LRP2BPQ9P2M1 347 aa18.35■□□□□ 0.53
MKS1-204ENST00000537529 ZNF804BA4D1E1 1349 aa18.35■□□□□ 0.53
MKS1-204ENST00000537529 COL4A1P02462 1669 aa18.34■□□□□ 0.53
MKS1-204ENST00000537529 BTAF1O14981 1849 aa18.34■□□□□ 0.53
MKS1-204ENST00000537529 SH2B2O14492 632 aaPredicted RBP18.34■□□□□ 0.53
MKS1-204ENST00000537529 MAP3K11Q16584 847 aa18.34■□□□□ 0.53
MKS1-204ENST00000537529 ZSCAN30Q86W11 494 aa18.34■□□□□ 0.53
MKS1-204ENST00000537529 NACAP1Q9BZK3 213 aa18.34■□□□□ 0.53
MKS1-204ENST00000537529 BCL2L12Q9HB09 334 aa18.34■□□□□ 0.53
MKS1-204ENST00000537529 EPB41L4AQ9HCS5 686 aaPredicted RBP18.34■□□□□ 0.53
MKS1-204ENST00000537529 TIAM2Q8IVF5 1701 aa18.34■□□□□ 0.53
MKS1-204ENST00000537529 CCDC192P0DO97 292 aa18.34■□□□□ 0.53
MKS1-204ENST00000537529 FDPSP14324 419 aaKnown RBP18.34■□□□□ 0.53
MKS1-204ENST00000537529 CYB5R4Q7L1T6 521 aa18.34■□□□□ 0.53
MKS1-204ENST00000537529 NEDD4P46934 1319 aa18.33■□□□□ 0.52
MKS1-204ENST00000537529 GNPATO15228 680 aa18.33■□□□□ 0.52
MKS1-204ENST00000537529 ZPR1O75312 459 aa18.33■□□□□ 0.52
MKS1-204ENST00000537529 ADD1P35611 737 aaKnown RBP18.33■□□□□ 0.52
MKS1-204ENST00000537529 PTF1AQ7RTS3 328 aa18.33■□□□□ 0.52
MKS1-204ENST00000537529 PGBD1Q96JS3 809 aa18.33■□□□□ 0.52
MKS1-204ENST00000537529 SETDB2Q96T68 719 aa18.33■□□□□ 0.52
MKS1-204ENST00000537529 CNNM2Q9H8M5 875 aa18.33■□□□□ 0.52
MKS1-204ENST00000537529 ORC3Q9UBD5 711 aaPredicted RBP18.33■□□□□ 0.52
MKS1-204ENST00000537529 CCNL1Q9UK58 526 aaPredicted RBP18.33■□□□□ 0.52
MKS1-204ENST00000537529 A0A1B0GUL6 1792 aa18.33■□□□□ 0.52
MKS1-204ENST00000537529 COL24A1Q17RW2 1714 aa18.33■□□□□ 0.52
MKS1-204ENST00000537529 B4E1Z4 1266 aa18.32■□□□□ 0.52
MKS1-204ENST00000537529 C8orf76Q96K31 380 aa18.32■□□□□ 0.52
MKS1-204ENST00000537529 DACT1Q9NYF0 836 aa18.32■□□□□ 0.52
MKS1-204ENST00000537529 RCOR1Q9UKL0 485 aa18.32■□□□□ 0.52
MKS1-204ENST00000537529 MYH15Q9Y2K3 1946 aa18.32■□□□□ 0.52
MKS1-204ENST00000537529 GSG1L2A8MUP6 293 aa18.32■□□□□ 0.52
MKS1-204ENST00000537529 CDKL5O76039 1030 aa18.32■□□□□ 0.52
MKS1-204ENST00000537529 GUCY1B3Q02153 619 aa18.32■□□□□ 0.52
MKS1-204ENST00000537529 CAVIN4Q5BKX8 364 aa18.32■□□□□ 0.52
MKS1-204ENST00000537529 NBPF5PQ86XG9 351 aaPredicted RBP18.32■□□□□ 0.52
MKS1-204ENST00000537529 LCORLQ8N3X6 602 aa18.32■□□□□ 0.52
MKS1-204ENST00000537529 RGS22Q8NE09 1264 aa18.32■□□□□ 0.52
MKS1-204ENST00000537529 TNMDQ9H2S6 317 aa18.32■□□□□ 0.52
MKS1-204ENST00000537529 CLSTN2Q9H4D0 955 aa18.32■□□□□ 0.52
MKS1-204ENST00000537529 CCDC39Q9UFE4 941 aa18.32■□□□□ 0.52
MKS1-204ENST00000537529 MINPP1Q9UNW1 487 aa18.32■□□□□ 0.52
MKS1-204ENST00000537529 SLC4A4Q9Y6R1 1079 aa18.32■□□□□ 0.52
MKS1-204ENST00000537529 PPFIA3O75145 1194 aa18.31■□□□□ 0.52
MKS1-204ENST00000537529 TDO2P48775 406 aa18.31■□□□□ 0.52
MKS1-204ENST00000537529 METAP2P50579 478 aaKnown RBP eCLIP18.31■□□□□ 0.52
MKS1-204ENST00000537529 KRT23Q9C075 422 aa18.31■□□□□ 0.52
MKS1-204ENST00000537529 SRP68Q9UHB9 627 aaKnown RBP18.31■□□□□ 0.52
MKS1-204ENST00000537529 RTCBQ9Y3I0 505 aaKnown RBP18.31■□□□□ 0.52
MKS1-204ENST00000537529 CYP7A1P22680 504 aa18.3■□□□□ 0.52
MKS1-204ENST00000537529 CPLX2Q6PUV4 134 aaKnown RBP18.3■□□□□ 0.52
MKS1-204ENST00000537529 NLRP3Q96P20 1036 aa18.3■□□□□ 0.52
MKS1-204ENST00000537529 DENND2AQ9ULE3 1009 aa18.3■□□□□ 0.52
MKS1-204ENST00000537529 C4AP0C0L4 1744 aa18.3■□□□□ 0.52
MKS1-204ENST00000537529 C4BP0C0L5 1744 aa18.3■□□□□ 0.52
MKS1-204ENST00000537529 CASZ1Q86V15 1759 aa18.3■□□□□ 0.52
MKS1-204ENST00000537529 GYG1P46976 350 aa18.3■□□□□ 0.52
MKS1-204ENST00000537529 TMEM67Q5HYA8 995 aa18.3■□□□□ 0.52
MKS1-204ENST00000537529 AKNAD1Q5T1N1 836 aa18.3■□□□□ 0.52
MKS1-204ENST00000537529 APOA5Q6Q788 366 aa18.3■□□□□ 0.52
MKS1-204ENST00000537529 VPS37DQ86XT2 251 aa18.3■□□□□ 0.52
MKS1-204ENST00000537529 RAB11FIP4Q86YS3 637 aa18.3■□□□□ 0.52
MKS1-204ENST00000537529 MSNP26038 577 aaKnown RBP18.29■□□□□ 0.52
MKS1-204ENST00000537529 CEBPZQ03701 1054 aaKnown RBP18.29■□□□□ 0.52
MKS1-204ENST00000537529 CTDSPL2Q05D32 466 aa18.29■□□□□ 0.52
MKS1-204ENST00000537529 NFXL1Q6ZNB6 911 aa18.29■□□□□ 0.52
MKS1-204ENST00000537529 MFSD6Q6ZSS7 791 aa18.29■□□□□ 0.52
MKS1-204ENST00000537529 CELF1Q92879 486 aaKnown RBP18.29■□□□□ 0.52
MKS1-204ENST00000537529 USP28Q96RU2 1077 aa18.29■□□□□ 0.52
MKS1-204ENST00000537529 RAI14Q9P0K7 980 aa18.29■□□□□ 0.52
MKS1-204ENST00000537529 IQSEC3Q9UPP2 1182 aaPredicted RBP18.29■□□□□ 0.52
MKS1-204ENST00000537529 PRKAB2O43741 272 aa18.29■□□□□ 0.52
MKS1-204ENST00000537529 CAMK4Q16566 473 aa18.29■□□□□ 0.52
MKS1-204ENST00000537529 SMIM5Q71RC9 77 aa18.29■□□□□ 0.52
MKS1-204ENST00000537529 ILDR1Q86SU0 546 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms