RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 USO1O60763 962 aaKnown RBP6.12□□□□□ -1.43
PTPRD-213ENST00000537002 FKBP4Q02790 459 aaKnown RBP eCLIP6.12□□□□□ -1.43
PTPRD-213ENST00000537002 CRYMQ14894 314 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 CDK19Q9BWU1 502 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 GUCA1BQ9UMX6 200 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 KIF4AO95239 1232 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 APOBRQ0VD83 1088 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 WHAMMP3Q1A5X7 153 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 SPECC1LQ69YQ0 1117 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 PPP1R13BQ96KQ4 1090 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 EMILIN1Q9Y6C2 1016 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 SBNO1A3KN83 1393 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 CHD1O14646 1710 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 GOLIM4O00461 696 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 LONRF2Q1L5Z9 754 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 ESCO1Q5FWF5 840 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 BAG1Q99933 345 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-213ENST00000537002 STX10O60499 249 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 SYKP43405 635 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 SPECC1Q5M775 1068 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 NEK1Q96PY6 1258 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 GGA2Q9UJY4 613 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 NDUFAB1O14561 156 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 MARCKSP29966 332 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-213ENST00000537002 PPFIA1Q13136 1202 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 NBPF9Q3BBW0 867 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 CCDC102BQ68D86 513 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 C14orf93Q9H972 538 aaKnown RBP6.11□□□□□ -1.43
PTPRD-213ENST00000537002 ATP10DQ9P241 1426 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 FBXO31Q5XUX0 539 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-213ENST00000537002 EVI5LQ96CN4 794 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 TBC1D2BQ9UPU7 963 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 RBM8AQ9Y5S9 174 aaKnown RBP6.11□□□□□ -1.43
PTPRD-213ENST00000537002 CAPN7Q9Y6W3 813 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 N4BP3O15049 544 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 C3orf20Q8ND61 904 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 CCDC51Q96ER9 411 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 GDAP1L1Q96MZ0 367 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 PRM3Q9NNZ6 103 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 GNL3LQ9NVN8 582 aaKnown RBP6.11□□□□□ -1.43
PTPRD-213ENST00000537002 GOLGA6CA6NDK9 693 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 KRT18P05783 430 aaKnown RBP6.11□□□□□ -1.43
PTPRD-213ENST00000537002 GOLGA6DP0CG33 693 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 SETSIPP0DME0 302 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 FKBP15Q5T1M5 1219 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 LARP1Q6PKG0 1096 aaKnown RBP6.11□□□□□ -1.43
PTPRD-213ENST00000537002 TSPYL6Q8N831 410 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 TCP11Q8WWU5 503 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 ECHDC1Q9NTX5 307 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 GOLGA6AQ9NYA3 693 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 CEP131Q9UPN4 1083 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 U3KPZ7 1027 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-213ENST00000537002 NCKAP5LQ9HCH0 1330 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 MAP3K5Q99683 1374 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 CCZ1BP86790 482 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 CCZ1P86791 482 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-213ENST00000537002 ARFGAP2Q8N6H7 521 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 ATG3Q9NT62 314 aa6.11□□□□□ -1.43
PTPRD-213ENST00000537002 LOC102724159A0A0B4J2E5 919 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 BUB1BO60566 1050 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-213ENST00000537002 UBE4AQ14139 1066 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 PWP2Q15269 919 aaKnown RBP6.1□□□□□ -1.43
PTPRD-213ENST00000537002 TDRD12Q587J7 1177 aaKnown RBP6.1□□□□□ -1.43
PTPRD-213ENST00000537002 KCNG4Q8TDN1 519 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 LEO1Q8WVC0 666 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-213ENST00000537002 AATKQ6ZMQ8 1374 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 MAP2K7O14733 419 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 TBC1D8O95759 1140 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 ICA1Q05084 483 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 DDR1Q08345 913 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 PPP2R5AQ15172 486 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 YTHDF3Q7Z739 585 aaKnown RBP6.1□□□□□ -1.43
PTPRD-213ENST00000537002 TTC14Q96N46 770 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 BABAM1Q9NWV8 329 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 CERKQ8TCT0 537 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 WASF1Q92558 559 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 MOV10L1Q9BXT6 1211 aaKnown RBP6.1□□□□□ -1.43
PTPRD-213ENST00000537002 GCKP35557 465 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 IQCB1Q15051 598 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 LONRF3Q496Y0 759 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 CCDC144CPQ8IYA2 1237 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 CCDC82Q8N4S0 544 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 C8orf58Q8NAV2 365 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 RHPN1Q8TCX5 695 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 ANKRD27Q96NW4 1050 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 SELENOSQ9BQE4 189 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 ZHX3Q9H4I2 956 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 SPATS2LQ9NUQ6 558 aaKnown RBP6.1□□□□□ -1.43
PTPRD-213ENST00000537002 RBBP5Q15291 538 aaKnown RBP6.1□□□□□ -1.43
PTPRD-213ENST00000537002 CCDC96Q2M329 555 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 RCSD1Q6JBY9 416 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 Q6ZUG5 572 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 IFT81Q8WYA0 676 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 PDE11AQ9HCR9 933 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 RAB21Q9UL25 225 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 GCOM1H8Y6P7 765 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-213ENST00000537002 MYZAPP0CAP1 466 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 GYS2P54840 703 aa6.1□□□□□ -1.43
PTPRD-213ENST00000537002 NAA30Q147X3 362 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-213ENST00000537002 PDCD2Q16342 344 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms