RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 CEP290O15078 2479 aa22.28■■□□□ 1.16
LTBR-206ENST00000536876 SP3Q02447 781 aa22.27■■□□□ 1.16
LTBR-206ENST00000536876 VGLL4Q14135 290 aa22.27■■□□□ 1.16
LTBR-206ENST00000536876 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.27■■□□□ 1.16
LTBR-206ENST00000536876 FAM84BQ96KN1 310 aaPredicted RBP22.27■■□□□ 1.16
LTBR-206ENST00000536876 TMEM39BQ9GZU3 492 aa22.27■■□□□ 1.16
LTBR-206ENST00000536876 CNNM1Q9NRU3 951 aa22.27■■□□□ 1.16
LTBR-206ENST00000536876 CCDC57Q2TAC2 916 aa22.26■■□□□ 1.15
LTBR-206ENST00000536876 DZIP1LQ8IYY4 767 aaKnown RBP22.26■■□□□ 1.15
LTBR-206ENST00000536876 GCC1Q96CN9 775 aa22.26■■□□□ 1.15
LTBR-206ENST00000536876 ZNF333Q96JL9 665 aa22.26■■□□□ 1.15
LTBR-206ENST00000536876 CRKP46108 304 aa22.25■■□□□ 1.15
LTBR-206ENST00000536876 TNFAIP1Q13829 316 aa22.25■■□□□ 1.15
LTBR-206ENST00000536876 UBE4AQ14139 1066 aa22.25■■□□□ 1.15
LTBR-206ENST00000536876 OTUD7BQ6GQQ9 843 aa22.25■■□□□ 1.15
LTBR-206ENST00000536876 FAM43AQ8N2R8 423 aa22.25■■□□□ 1.15
LTBR-206ENST00000536876 SUCLG2Q96I99 432 aa22.25■■□□□ 1.15
LTBR-206ENST00000536876 TCP10L2B9ZVM9 353 aa22.24■■□□□ 1.15
LTBR-206ENST00000536876 PTCH2Q9Y6C5 1203 aa22.24■■□□□ 1.15
LTBR-206ENST00000536876 HIBADHP31937 336 aaKnown RBP22.23■■□□□ 1.15
LTBR-206ENST00000536876 TAF7LQ5H9L4 462 aa22.23■■□□□ 1.15
LTBR-206ENST00000536876 WDR63Q8IWG1 891 aa22.23■■□□□ 1.15
LTBR-206ENST00000536876 RIPOR2Q9Y4F9 1068 aa22.23■■□□□ 1.15
LTBR-206ENST00000536876 CCL15-CCL14A0A0B4J2E2 113 aa22.22■■□□□ 1.15
LTBR-206ENST00000536876 CCL15Q16663 113 aa22.22■■□□□ 1.15
LTBR-206ENST00000536876 SALL2Q9Y467 1007 aaPredicted RBP22.22■■□□□ 1.15
LTBR-206ENST00000536876 SNCAIPQ9Y6H5 919 aa22.22■■□□□ 1.15
LTBR-206ENST00000536876 CACNB3P54284 484 aa22.21■■□□□ 1.15
LTBR-206ENST00000536876 TAF1CQ15572 869 aaPredicted RBP22.21■■□□□ 1.15
LTBR-206ENST00000536876 FBXO33Q7Z6M2 555 aa22.21■■□□□ 1.15
LTBR-206ENST00000536876 OTUD5Q96G74 571 aa22.21■■□□□ 1.15
LTBR-206ENST00000536876 ARHGAP39Q9C0H5 1083 aa22.21■■□□□ 1.15
LTBR-206ENST00000536876 IQSEC3Q9UPP2 1182 aaPredicted RBP22.21■■□□□ 1.15
LTBR-206ENST00000536876 SZT2Q5T011 3432 aa22.2■■□□□ 1.14
LTBR-206ENST00000536876 SPDYE5A6NIY4 337 aa22.2■■□□□ 1.14
LTBR-206ENST00000536876 ALDH1L1O75891 902 aa22.2■■□□□ 1.14
LTBR-206ENST00000536876 NBPF7P0C2Y1 421 aaPredicted RBP22.2■■□□□ 1.14
LTBR-206ENST00000536876 MAP3K9P80192 1104 aa22.2■■□□□ 1.14
LTBR-206ENST00000536876 VGLL2Q8N8G2 317 aa22.2■■□□□ 1.14
LTBR-206ENST00000536876 UTYO14607 1347 aa22.2■■□□□ 1.14
LTBR-206ENST00000536876 TRIOBPQ9H2D6 2365 aa22.19■■□□□ 1.14
LTBR-206ENST00000536876 GTF2A2P52657 109 aa22.19■■□□□ 1.14
LTBR-206ENST00000536876 ANKRD44Q8N8A2 993 aa22.19■■□□□ 1.14
LTBR-206ENST00000536876 C9orf78Q9NZ63 289 aaPredicted RBP22.19■■□□□ 1.14
LTBR-206ENST00000536876 FXR1P51114 621 aaKnown RBP eCLIP22.18■■□□□ 1.14
LTBR-206ENST00000536876 RABL6Q3YEC7 729 aaPredicted RBP22.18■■□□□ 1.14
LTBR-206ENST00000536876 LRRC24Q50LG9 513 aa22.18■■□□□ 1.14
LTBR-206ENST00000536876 ZFYVE28Q9HCC9 887 aa22.18■■□□□ 1.14
LTBR-206ENST00000536876 RANBP2P49792 3224 aaKnown RBP22.18■■□□□ 1.14
LTBR-206ENST00000536876 MGAMO43451 1857 aa22.17■■□□□ 1.14
LTBR-206ENST00000536876 RPAP1Q9BWH6 1393 aaPredicted RBP22.17■■□□□ 1.14
LTBR-206ENST00000536876 MROH5Q6ZUA9 1318 aa22.17■■□□□ 1.14
LTBR-206ENST00000536876 CHAF1AQ13111 956 aaPredicted RBP22.17■■□□□ 1.14
LTBR-206ENST00000536876 SRCIN1Q9C0H9 1055 aa22.17■■□□□ 1.14
LTBR-206ENST00000536876 BICC1Q9H694 974 aaKnown RBP22.17■■□□□ 1.14
LTBR-206ENST00000536876 DOCK2Q92608 1830 aa22.16■■□□□ 1.14
LTBR-206ENST00000536876 HDLBPQ00341 1268 aaKnown RBP22.16■■□□□ 1.14
LTBR-206ENST00000536876 SLC9C1Q4G0N8 1177 aa22.16■■□□□ 1.14
LTBR-206ENST00000536876 SLC4A10Q6U841 1118 aa22.16■■□□□ 1.14
LTBR-206ENST00000536876 MRS2Q9HD23 443 aa22.16■■□□□ 1.14
LTBR-206ENST00000536876 CSADQ9Y600 493 aa22.16■■□□□ 1.14
LTBR-206ENST00000536876 BTBD19C9JJ37 291 aa22.15■■□□□ 1.14
LTBR-206ENST00000536876 CTGFP29279 349 aa22.15■■□□□ 1.14
LTBR-206ENST00000536876 TNNI2P48788 182 aa22.15■■□□□ 1.14
LTBR-206ENST00000536876 APOBEC3HQ6NTF7 200 aaKnown RBP22.15■■□□□ 1.14
LTBR-206ENST00000536876 ZKSCAN4Q969J2 545 aaPredicted RBP22.15■■□□□ 1.14
LTBR-206ENST00000536876 PTPRFP10586 1907 aa22.14■■□□□ 1.14
LTBR-206ENST00000536876 ADGRA2Q96PE1 1338 aa22.14■■□□□ 1.14
LTBR-206ENST00000536876 IRF6O14896 467 aa22.14■■□□□ 1.13
LTBR-206ENST00000536876 SH3TC2Q8TF17 1288 aa22.14■■□□□ 1.13
LTBR-206ENST00000536876 ZDHHC15Q96MV8 337 aa22.14■■□□□ 1.13
LTBR-206ENST00000536876 WRNIP1Q96S55 665 aa22.14■■□□□ 1.13
LTBR-206ENST00000536876 TLR2O60603 784 aa22.13■■□□□ 1.13
LTBR-206ENST00000536876 LACTBP83111 547 aaPredicted RBP22.13■■□□□ 1.13
LTBR-206ENST00000536876 ERO1BQ86YB8 467 aa22.13■■□□□ 1.13
LTBR-206ENST00000536876 KLHDC4Q8TBB5 520 aa22.13■■□□□ 1.13
LTBR-206ENST00000536876 TEKT1Q969V4 418 aa22.13■■□□□ 1.13
LTBR-206ENST00000536876 TMEM106CQ9BVX2 250 aa22.13■■□□□ 1.13
LTBR-206ENST00000536876 AK9Q5TCS8 1911 aa22.13■■□□□ 1.13
LTBR-206ENST00000536876 MYCP01106 439 aaPredicted RBP22.12■■□□□ 1.13
LTBR-206ENST00000536876 BCAMP50895 628 aa22.12■■□□□ 1.13
LTBR-206ENST00000536876 PPIL2Q13356 520 aa22.12■■□□□ 1.13
LTBR-206ENST00000536876 FAM83AQ86UY5 434 aa22.12■■□□□ 1.13
LTBR-206ENST00000536876 TBC1D22AQ8WUA7 517 aa22.12■■□□□ 1.13
LTBR-206ENST00000536876 SHISA4Q96DD7 197 aa22.12■■□□□ 1.13
LTBR-206ENST00000536876 ZCCHC17Q9NP64 241 aaKnown RBP22.12■■□□□ 1.13
LTBR-206ENST00000536876 COLQQ9Y215 455 aaPredicted RBP22.12■■□□□ 1.13
LTBR-206ENST00000536876 PHIPQ8WWQ0 1821 aa22.11■■□□□ 1.13
LTBR-206ENST00000536876 CETPP11597 493 aa22.11■■□□□ 1.13
LTBR-206ENST00000536876 FGFR2P21802 821 aa22.11■■□□□ 1.13
LTBR-206ENST00000536876 METTL24Q5JXM2 366 aa22.11■■□□□ 1.13
LTBR-206ENST00000536876 PDE8BO95263 885 aa22.1■■□□□ 1.13
LTBR-206ENST00000536876 FKBP1CQ5VVH2 108 aa22.1■■□□□ 1.13
LTBR-206ENST00000536876 VPS37DQ86XT2 251 aa22.1■■□□□ 1.13
LTBR-206ENST00000536876 KIF16BQ96L93 1317 aa22.09■■□□□ 1.13
LTBR-206ENST00000536876 INPP5BP32019 993 aa22.09■■□□□ 1.13
LTBR-206ENST00000536876 SNAPC2Q13487 334 aa22.09■■□□□ 1.13
LTBR-206ENST00000536876 MOGSQ13724 837 aa22.09■■□□□ 1.13
LTBR-206ENST00000536876 SLC4A8Q2Y0W8 1093 aa22.09■■□□□ 1.13
LTBR-206ENST00000536876 MRIQ9BWK5 157 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms